Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10095 Davidia involucrata HOM05D000361 ORTHO05D004243 3.6e-71 271.6 143 100.0
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 2.0e-45 186.0 111 87.4
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 7.5e-45 184.1 105 90.5
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 1.7e-44 183.0 107 88.8
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 2.2e-44 182.6 107 87.9
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 2.2e-44 182.6 107 87.9
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 1.8e-43 179.5 105 87.6
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 2.4e-43 179.1 105 88.6
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 2.4e-43 179.1 107 86.9
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 2.4e-43 179.1 107 86.9
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 4.1e-43 178.3 133 71.4
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 4.1e-43 178.3 107 86.0
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 7.0e-43 177.6 107 86.9
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 9.1e-43 177.2 107 86.0
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 9.1e-43 177.2 107 86.0
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 1.2e-42 176.8 107 86.0
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 1.2e-42 176.8 107 86.0
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.2e-42 176.8 107 85.0
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 1.2e-42 176.8 107 85.0
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 2.0e-42 176.0 107 85.0
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 2.7e-42 175.6 107 85.0
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 3.5e-42 175.3 107 86.0
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 4.5e-42 174.9 107 83.2
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 4.5e-42 174.9 107 83.2
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 5.9e-42 174.5 105 85.7
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 5.9e-42 174.5 105 85.7
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 7.7e-42 174.1 107 83.2
Atru.chr5.1003 Acer truncatum HOM05D000361 ORTHO05D004243 1.0e-41 173.7 129 72.9
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 1.3e-41 173.3 106 84.9
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 1.3e-41 173.3 107 85.0
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.3e-41 173.3 105 84.8
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 1.3e-41 173.3 107 83.2
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 2.3e-41 172.6 106 83.0
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 2.9e-41 172.2 107 84.1
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 3.8e-41 171.8 105 83.8
Cpa.g.sc18.42 Carica papaya HOM05D000361 ORTHO05D004243 5.0e-41 171.4 107 83.2
Nitab4.5_0011075g0020 Nicotiana tabacum HOM05D000361 ORTHO05D004243 8.6e-41 170.6 105 83.8
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 8.6e-41 170.6 107 82.2
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.1e-40 170.2 107 80.4
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 1.1e-40 170.2 120 75.0
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 1.5e-40 169.9 107 80.4
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 1.5e-40 169.9 107 80.4
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 1.5e-40 169.9 106 84.0
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 1.5e-40 169.9 107 81.3
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 1.9e-40 169.5 133 69.2
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 1.9e-40 169.5 106 83.0
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 1.9e-40 169.5 133 68.4
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 2.5e-40 169.1 106 84.0
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 2.5e-40 169.1 106 84.0
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 2.5e-40 169.1 106 84.0
unitig_736.g22938 Utricularia gibba HOM05D000361 ORTHO05D004243 2.5e-40 169.1 107 82.2
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 3.3e-40 168.7 107 83.2
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 3.3e-40 168.7 106 84.0
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 3.3e-40 168.7 113 77.9
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 4.2e-40 168.3 106 84.0
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 4.2e-40 168.3 106 84.0
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 4.2e-40 168.3 106 84.0
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 4.2e-40 168.3 106 84.0
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 4.2e-40 168.3 106 84.0
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 4.2e-40 168.3 106 84.0
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 4.2e-40 168.3 107 82.2
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 4.2e-40 168.3 107 80.4
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 4.2e-40 168.3 106 84.0
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 5.5e-40 167.9 107 80.4
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 5.5e-40 167.9 107 80.4
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 5.5e-40 167.9 107 82.2
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 7.2e-40 167.5 132 68.2
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 7.2e-40 167.5 105 81.9
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 7.2e-40 167.5 107 81.3
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 7.2e-40 167.5 107 82.2
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 9.5e-40 167.2 107 80.4
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 9.5e-40 167.2 107 80.4
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 1.2e-39 166.8 107 80.4
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 1.2e-39 166.8 107 82.2
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 1.2e-39 166.8 107 82.2
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 1.2e-39 166.8 106 84.0
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 1.6e-39 166.4 106 83.0
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 1.6e-39 166.4 104 83.7
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 2.1e-39 166.0 107 80.4
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 2.1e-39 166.0 114 78.1
Gohir.D11G114600 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.1e-39 166.0 107 80.4
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 2.1e-39 166.0 107 80.4
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 2.1e-39 166.0 107 81.3
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 2.8e-39 165.6 107 82.2
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 3.6e-39 165.2 107 80.4
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 4.7e-39 164.9 107 78.5
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 4.7e-39 164.9 107 78.5
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 4.7e-39 164.9 107 80.4
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 4.7e-39 164.9 104 82.7
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 4.7e-39 164.9 107 78.5
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 4.7e-39 164.9 113 78.8
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 4.7e-39 164.9 134 67.9
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 6.1e-39 164.5 107 80.4
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 8.0e-39 164.1 113 77.9
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 8.0e-39 164.1 113 77.9
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 1.8e-38 162.9 107 80.4
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.8e-38 162.9 111 79.3
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.8e-38 162.9 122 72.1
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 1.8e-38 162.9 134 66.4
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 1.8e-38 162.9 107 79.4
ClCG10G006350 Citrullus lanatus HOM05D000361 ORTHO05D004243 2.3e-38 162.5 107 79.4
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 2.3e-38 162.5 105 81.0
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 2.3e-38 162.5 133 62.4
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 4.0e-38 161.8 133 66.9
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 4.0e-38 161.8 106 80.2
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 5.2e-38 161.4 107 78.5
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 5.2e-38 161.4 104 78.8
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 5.2e-38 161.4 102 83.3
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 6.8e-38 161.0 107 79.4
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 6.8e-38 161.0 106 79.2
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 6.8e-38 161.0 106 79.2
Lalb_Chr15g0078171 Lupinus albus HOM05D000361 ORTHO05D004243 6.8e-38 161.0 107 78.5
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 8.9e-38 160.6 114 74.6
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 3.4e-37 158.7 109 76.1
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 5.7e-37 157.9 99 84.8
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 1.3e-36 156.8 107 76.6
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 1.7e-36 156.4 105 77.1
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 3.7e-36 155.2 127 65.4
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 3.1e-35 152.1 113 72.6
DCAR_005760 Daucus carota HOM05D000361 ORTHO05D004243 5.4e-35 151.4 107 72.9
Oeu041216.1 Olea europaea HOM05D000361 ORTHO05D004243 9.2e-35 150.6 107 73.8
SEGI_09541 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 4.5e-34 148.3 106 69.8
SHI15042 Sapria himalayana HOM05D000361 ORTHO05D004243 2.4e-27 125.9 107 66.4
Zm00001eb056500 Zea mays HOM05D000361 ORTHO05D004243 1.2e-26 123.6 80 78.8
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 1.7e-25 119.8 102 62.7
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 5.0e-25 118.2 102 60.8
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 1.1e-24 117.1 105 60.0
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 1.5e-24 116.7 113 59.3
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 6.2e-23 111.3 109 56.9
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 1.8e-22 109.8 104 57.7
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 5.8e-21 104.8 107 57.0
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 7.5e-21 104.4 104 54.8
Glyma.19G216151 Glycine max HOM05D000361 ORTHO05D004243 1.7e-20 103.2 74 78.4
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 3.7e-20 102.1 133 45.9
BcaC04g24029 Brassica carinata HOM05D000361 ORTHO05D004243 1.9e-19 99.8 87 65.5
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 4.1e-19 98.6 103 57.3
CDE05G1119 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 6.6e-17 91.3 62 74.2
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 1.1e-08 63.9 102 36.3
PRCOL_00004542 Prasinoderma coloniale HOM05D000361 ORTHO05D004243 5.6e-08 61.6 104 37.5
COL.COLO4_26725 Corchorus olitorius HOM05D000361 ORTHO05D004243 9.5e-08 60.8 108 38.9
Cc02_g33820 Coffea canephora HOM05D000361 ORTHO05D004243 4.7e-07 58.5 36 83.3
Cc04_g08620 Coffea canephora HOM05D000361 ORTHO05D004243 4.7e-07 58.5 36 83.3
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 1.4e-06 57.0 37 78.4
TAR362G1176 Trochodendron aralioides HOM05D000361 ORTHO05D004243 1.4e-06 57.0 47 63.8
Cc02_g26000 Coffea canephora HOM05D000361 ORTHO05D004243 2.4e-06 56.2 36 80.6
Cc05_g04720 Coffea canephora HOM05D000361 ORTHO05D004243 2.4e-06 56.2 36 80.6
Cc11_g04100 Coffea canephora HOM05D000361 ORTHO05D004243 2.4e-06 56.2 36 80.6
Lsat_1_v5_gn_0_31980 Lactuca sativa HOM05D000329 ORTHO05D000833 2.4e-06 56.2 40 72.5


User provided reference genes

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