Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10093 Davidia involucrata HOM05D002853 ORTHO05D003030 6.2e-208 727.2 372 100.0
TAR365G0474 Trochodendron aralioides HOM05D002853 ORTHO05D003030 8.4e-64 248.4 410 42.0
CSS0022639 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 1.4e-63 247.7 400 44.8
Lj2C1205G3 Lonicera japonica HOM05D002853 ORTHO05D003030 9.3e-63 245.0 395 45.1
TAR636G0059 Trochodendron aralioides HOM05D002853 ORTHO05D003030 4.0e-58 229.6 410 38.5
Hma1.2p1_0212F.1_g089950 Hydrangea macrophylla HOM05D002853 ORTHO05D003030 5.1e-53 212.6 375 41.3
Nn3g21683 Nelumbo nucifera HOM05D002853 ORTHO05D003030 3.8e-40 169.9 410 35.4
QL12p020012 Quercus lobata HOM05D002853 ORTHO05D003030 3.0e-37 160.2 361 36.0
Atru.chr5.1005 Acer truncatum HOM05D002853 ORTHO05D003030 1.1e-36 158.3 391 34.5
Haze_05037 Corylus avellana HOM05D002853 ORTHO05D003030 6.3e-35 152.5 372 37.1
vmacro02406 Vaccinium macrocarpon HOM05D002853 ORTHO05D003030 5.3e-34 149.4 329 39.2
Ciclev10018465m.g Citrus clementina HOM05D002853 ORTHO05D003030 6.9e-34 149.1 387 34.1
Thecc.01G312900 Theobroma cacao HOM05D002853 ORTHO05D003030 1.1e-31 141.7 388 34.0
Cfa005803 Carpinus fangiana HOM05D002853 ORTHO05D003030 7.2e-31 139.0 373 35.1
Duzib133G0460 Durio zibethinus HOM05D002853 ORTHO05D003030 6.1e-30 136.0 386 33.4
CiPaw.07G117100 Carya illinoinensis HOM05D002853 ORTHO05D003030 1.0e-29 135.2 364 33.8
Oeu005863.1 Olea europaea HOM05D002853 ORTHO05D003030 1.1e-28 131.7 324 35.2
Gohir.D07G132700 Gossypium hirsutum HOM05D002853 ORTHO05D003030 4.1e-26 123.2 369 31.7
Gorai.001G144100 Gossypium raimondii HOM05D002853 ORTHO05D003030 5.3e-26 122.9 369 31.7
Glyma.02G012900 Glycine max HOM05D002853 ORTHO05D003030 2.2e-24 117.5 367 30.8
Aqoxy2G02774 Aquilegia oxysepala HOM05D002853 ORTHO05D003030 2.9e-24 117.1 386 29.0
Gohir.A07G128400 Gossypium hirsutum HOM05D002853 ORTHO05D003030 2.9e-24 117.1 373 30.8
Glyma.10G013500 Glycine max HOM05D002853 ORTHO05D003030 5.0e-24 116.3 335 32.8
MBI18_g31676_MAGBIO Magnolia biondii HOM05D002853 ORTHO05D003030 1.1e-23 115.2 340 29.7
Actinidia17889 Actinidia chinensis HOM05D002853 ORTHO05D003030 4.7e-22 109.8 199 42.2
Dinv15192 Davidia involucrata HOM05D002853 ORTHO05D003030 8.0e-22 109.0 377 31.6
VMungo0720G0487 Vigna mungo HOM05D002853 ORTHO05D003030 1.7e-19 101.3 329 31.0
CANSAT25G1051 Cannabis sativa HOM05D002853 ORTHO05D003030 3.1e-18 97.1 376 30.1
TPR.G19779 Trifolium pratense HOM05D002853 ORTHO05D003030 5.3e-18 96.3 375 28.5
Phvul.007G214600 Phaseolus vulgaris HOM05D002853 ORTHO05D003030 1.6e-17 94.7 321 30.2
Lj3C830T2 Lonicera japonica HOM05D002853 ORTHO05D003030 7.7e-17 92.4 352 29.5
Medtr1g087120 Medicago truncatula HOM05D002853 ORTHO05D003030 7.7e-17 92.4 368 29.3
Potri.014G121100 Populus trichocarpa HOM05D002853 ORTHO05D003030 1.3e-16 91.7 356 28.4
Potri.010G142700 Populus trichocarpa HOM05D002853 ORTHO05D003030 2.2e-16 90.9 356 28.1
Eucgr.H01047 Eucalyptus grandis HOM05D002853 ORTHO05D003030 3.8e-16 90.1 382 28.3
Lalb_Chr02g0146801 Lupinus albus HOM05D002853 ORTHO05D003030 6.5e-16 89.4 356 28.4
Manes.01G227500 Manihot esculenta HOM05D002853 ORTHO05D003030 1.5e-15 88.2 379 30.1
Prupe.8G271800 Prunus persica HOM05D002853 ORTHO05D003030 1.9e-15 87.8 357 26.3
Prupe.1G121900 Prunus persica HOM05D002853 ORTHO05D003030 4.2e-15 86.7 392 29.8
GSVIVG01028117001 Vitis vinifera HOM05D002853 ORTHO05D003030 7.2e-15 85.9 238 36.1
COL.COLO4_23236 Corchorus olitorius HOM05D002853 ORTHO05D003030 1.2e-14 85.1 277 31.4
CSS0011611 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 1.6e-14 84.7 330 28.5
Ca_10286_v3 Cicer arietinum L. HOM05D002853 ORTHO05D003030 2.1e-14 84.3 336 29.2
Atru.chr4.3027 Acer truncatum HOM05D002853 ORTHO05D003030 4.7e-14 83.2 374 25.9
arahy.Tifrunner.gnm1.ann1.A1PMZW Arachis hypogaea HOM05D002853 ORTHO05D003030 3.0e-13 80.5 356 26.7
Actinidia40363 Actinidia chinensis HOM05D002853 ORTHO05D003030 5.2e-13 79.7 246 31.7
GSVIVG01035014001 Vitis vinifera HOM05D002853 ORTHO05D003030 5.2e-13 79.7 303 29.4
Lalb_Chr21g0309571 Lupinus albus HOM05D002853 ORTHO05D003030 6.7e-13 79.3 369 27.9
Actinidia15596 Actinidia chinensis HOM05D002853 ORTHO05D003030 2.0e-12 77.8 241 32.0
Psat6g161760 Pisum sativum HOM05D002853 ORTHO05D003030 3.3e-12 77.0 353 27.2
ClCG05G006470 Citrullus lanatus HOM05D002853 ORTHO05D003030 5.7e-12 76.3 240 29.6
QL06p011649 Quercus lobata HOM05D002853 ORTHO05D003030 5.7e-12 76.3 386 26.4
Sabra10G0110600 Salix brachista HOM05D002853 ORTHO05D003030 5.7e-12 76.3 355 28.2
CsaV3_3G015110 Cucumis sativus L. HOM05D002853 ORTHO05D003030 1.3e-11 75.1 369 24.7
MELO3C006708.2 Cucumis melo HOM05D002853 ORTHO05D003030 8.2e-11 72.4 193 30.1
Hma1.2p1_0013F.1_g008710 Hydrangea macrophylla HOM05D002853 ORTHO05D003030 8.2e-11 72.4 340 27.9
Potri.008G106800 Populus trichocarpa HOM05D002853 ORTHO05D003030 1.1e-10 72.0 367 27.0
CANSAT78G0527 Cannabis sativa HOM05D002853 ORTHO05D003030 2.4e-10 70.9 399 22.3
Sed0009870 Sechium edule HOM05D002853 ORTHO05D003030 2.4e-10 70.9 247 28.3
Sabra14G0089700 Salix brachista HOM05D002853 ORTHO05D003030 3.1e-10 70.5 332 26.5
DCAR_012355 Daucus carota HOM05D002853 ORTHO05D003030 7.0e-10 69.3 295 28.8
MSTRG.21684 Avicennia marina HOM05D002853 ORTHO05D003030 1.6e-09 68.2 341 26.4
Dinv44300 Davidia involucrata HOM05D002853 ORTHO05D003030 3.5e-09 67.0 138 39.9
TWI36G0696 Tripterygium wilfordii HOM05D002853 ORTHO05D003030 3.5e-09 67.0 363 27.0
TWI53G0106 Tripterygium wilfordii HOM05D002853 ORTHO05D003030 4.5e-09 66.6 209 29.7
MSTRG.10145 Avicennia marina HOM05D002853 ORTHO05D003030 5.9e-09 66.2 353 26.6
Duzib052G0993 Durio zibethinus HOM05D002853 ORTHO05D003030 7.7e-09 65.9 211 30.8
MD13G1156100 Malus domestica HOM05D002853 ORTHO05D003030 3.8e-08 63.5 263 32.3
CiPaw.01G139600 Carya illinoinensis HOM05D002853 ORTHO05D003030 8.5e-08 62.4 216 27.3
Cc01_g21370 Coffea canephora HOM05D002853 ORTHO05D003030 1.1e-07 62.0 288 27.4
Ciclev10004131m.g Citrus clementina HOM05D002853 ORTHO05D003030 1.9e-07 61.2 335 27.2
Oeu019967.2 Olea europaea HOM05D002853 ORTHO05D003030 1.9e-07 61.2 331 25.7
TWI73G0899 Tripterygium wilfordii HOM05D002853 ORTHO05D003030 1.9e-07 61.2 164 32.3
SalBow8G2160 Salvia bowleyana HOM05D002853 ORTHO05D003030 5.5e-07 59.7 313 26.5
CDE09G0366 Ceratophyllum demersum HOM05D002853 ORTHO05D003030 7.2e-07 59.3 306 26.5
Hund03116 Selenicereus undatus HOM05D002853 ORTHO05D003030 7.2e-07 59.3 165 30.3
Haze_01279 Corylus avellana HOM05D002853 ORTHO05D003030 9.4e-07 58.9 208 30.8
Gohir.D09G064500 Gossypium hirsutum HOM05D002853 ORTHO05D003030 1.2e-06 58.5 411 24.6
CDE02G1009 Ceratophyllum demersum HOM05D002853 ORTHO05D003030 1.6e-06 58.2 250 28.8
Nitab4.5_0001301g0060 Nicotiana tabacum HOM05D002853 ORTHO05D003030 1.6e-06 58.2 353 27.2
Gorai.006G079300 Gossypium raimondii HOM05D002853 ORTHO05D003030 2.1e-06 57.8 277 26.7
MD16G1157000 Malus domestica HOM05D002853 ORTHO05D003030 2.1e-06 57.8 192 34.4
Manes.15G005300 Manihot esculenta HOM05D002853 ORTHO05D003030 2.1e-06 57.8 208 30.3
Phvul.009G256200 Phaseolus vulgaris HOM05D002853 ORTHO05D003030 2.7e-06 57.4 210 30.0
Cfa015336 Carpinus fangiana HOM05D002853 ORTHO05D003030 3.6e-06 57.0 372 25.8
Glyma.15G142600 Glycine max HOM05D002853 ORTHO05D003030 3.6e-06 57.0 202 29.2
Ca_01869_v3 Cicer arietinum L. HOM05D002853 ORTHO05D003030 4.7e-06 56.6 156 32.7
COL.COLO4_34647 Corchorus olitorius HOM05D002853 ORTHO05D003030 6.1e-06 56.2 266 27.4
Gohir.A09G065600 Gossypium hirsutum HOM05D002853 ORTHO05D003030 6.1e-06 56.2 237 27.8
Nitab4.5_0008811g0020 Nicotiana tabacum HOM05D002853 ORTHO05D003030 6.1e-06 56.2 348 26.7


User provided reference genes

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