Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10023 Davidia involucrata HOM05D010072 ORTHO05D011797 8.6e-67 256.9 136 100.0
Dinv00587 Davidia involucrata HOM05D010002 ORTHO05D011797 2.3e-27 125.9 99 75.8
Cc07_g18990 Coffea canephora HOM05D000162 ORTHO05D000090 2.2e-14 82.8 102 40.2
Hund21894 Selenicereus undatus HOM05D000162 ORTHO05D000090 6.1e-12 74.7 82 40.2
ECA234G1654 Erigeron canadensis HOM05D000162 ORTHO05D000090 7.9e-12 74.3 103 36.9
RcHm_v2.0_Chr5g0078541 Rosa chinensis HOM05D009346 ORTHO05D012019 1.0e-11 73.9 90 45.6
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 2.3e-11 72.8 83 48.2
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 2.3e-11 72.8 83 48.2
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 3.0e-11 72.4 108 45.4
Migut.O00943 Erythranthe guttata HOM05D006895 ORTHO05D008605 3.9e-11 72.0 111 36.0
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 3.9e-11 72.0 101 35.6
Medtr1g039290 Medicago truncatula HOM05D010072 ORTHO05D011797 6.7e-11 71.2 102 39.2
Hund21880 Selenicereus undatus HOM05D000162 ORTHO05D000090 1.1e-10 70.5 76 39.5
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 2.0e-10 69.7 111 36.9
ECA240G0604 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.6e-10 69.3 119 36.1
Medtr1g064150 Medicago truncatula HOM05D010072 ORTHO05D011797 4.4e-10 68.6 109 42.2
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 5.7e-10 68.2 127 30.7
PSO170G2530 Papaver somniferum HOM05D008994 ORTHO05D010954 9.7e-10 67.4 103 39.8
Medtr3g104020 Medicago truncatula HOM05D010072 ORTHO05D011797 1.3e-09 67.0 105 35.2
AUR62006756 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.7e-09 66.6 73 41.1
AUR62005166 Chenopodium quinoa HOM05D001413 ORTHO05D003288 3.7e-09 65.5 75 41.3
Glyma.07G102000 Glycine max HOM05D010072 ORTHO05D011797 6.3e-09 64.7 75 48.0
MBI11_g20198_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 6.3e-09 64.7 80 38.8
Lsat_1_v5_gn_1_11600 Lactuca sativa HOM05D000162 ORTHO05D000090 8.2e-09 64.3 91 48.4
AUR62000390 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.1e-08 63.9 73 38.4
Haze_03423 Corylus avellana HOM05D000027 ORTHO05D000500 1.1e-08 63.9 95 40.0
MD04G1014300 Malus domestica HOM05D000162 ORTHO05D000090 1.1e-08 63.9 78 39.7
AUR62000377 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.4e-08 63.5 73 37.0
ECA240G4052 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.4e-08 63.5 102 35.3
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.8e-08 63.2 98 37.8
AUR62006791 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.4e-08 62.8 73 38.4
Cc06_g18850 Coffea canephora HOM05D000162 ORTHO05D000090 2.4e-08 62.8 73 49.3
Nitab4.5_0001998g0170 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.1e-08 62.4 105 32.4
PSO017G0734 Papaver somniferum HOM05D000162 ORTHO05D000090 3.1e-08 62.4 111 35.1
PSO675G8724 Papaver somniferum HOM05D008994 ORTHO05D010954 4.1e-08 62.0 112 43.8
arahy.Tifrunner.gnm1.ann1.947KSG Arachis hypogaea HOM05D000162 ORTHO05D000090 7.0e-08 61.2 89 41.6
Cc07_g19010 Coffea canephora HOM05D000162 ORTHO05D000090 7.0e-08 61.2 113 41.6
ECA240G3448 Erigeron canadensis HOM05D000162 ORTHO05D000090 9.1e-08 60.8 117 30.8
ECA247G3050 Erigeron canadensis HOM05D016049 ORTHO05D018419 9.1e-08 60.8 114 37.7
Hund27505 Selenicereus undatus HOM05D021897 ORTHO05D010954 9.1e-08 60.8 75 37.3
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 9.1e-08 60.8 115 33.9
arahy.Tifrunner.gnm1.ann1.QV0CY4 Arachis hypogaea HOM05D000162 ORTHO05D000090 1.2e-07 60.5 99 36.4
Cc00_g04080 Coffea canephora HOM05D009346 ORTHO05D020421 1.2e-07 60.5 77 41.6
AL5G43620 Arabidopsis lyrata HOM05D003039 ORTHO05D008410 1.5e-07 60.1 112 28.6
ECA233G5832 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.5e-07 60.1 92 44.6
FvH4_3g03080 Fragaria vesca HOM05D000891 ORTHO05D000761 1.5e-07 60.1 136 29.4
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 1.5e-07 60.1 115 34.8
Hma1.2p1_1276F.1_g272100 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.5e-07 60.1 75 49.3
AUR62000462 Chenopodium quinoa HOM05D000162 ORTHO05D010954 2.0e-07 59.7 72 36.1
ECA240G1752 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.0e-07 59.7 112 34.8
Medtr1g064170 Medicago truncatula HOM05D010072 ORTHO05D011797 2.0e-07 59.7 105 37.1
Sp6g25850 Schrenkiella parvula HOM05D007660 ORTHO05D009442 2.0e-07 59.7 101 29.7
AUR62000309 Chenopodium quinoa HOM05D006174 ORTHO05D007987 2.6e-07 59.3 88 35.2
Thhalv10010303m.g Eutrema salsugineum HOM05D007660 ORTHO05D009442 2.6e-07 59.3 107 29.0
Medtr1g064380 Medicago truncatula HOM05D010072 ORTHO05D011797 2.6e-07 59.3 130 34.6
Eucgr.D00236 Eucalyptus grandis HOM05D003039 ORTHO05D008410 3.4e-07 58.9 112 29.5
CsaV3_3G035530 Cucumis sativus L. HOM05D000855 ORTHO05D008530 4.5e-07 58.5 113 32.7
PGR083G0809 Punica granatum HOM05D010002 ORTHO05D011797 4.5e-07 58.5 78 46.2
CARHR194540 Cardamine hirsuta HOM05D007660 ORTHO05D009442 5.9e-07 58.2 102 28.4
Thhalv10001849m.g Eutrema salsugineum HOM05D007660 ORTHO05D009442 5.9e-07 58.2 109 25.7
RcHm_v2.0_Chr5g0072771 Rosa chinensis HOM05D009519 ORTHO05D010307 5.9e-07 58.2 39 69.2
TAR362G0394 Trochodendron aralioides HOM05D010072 ORTHO05D020421 5.9e-07 58.2 44 61.4
EL10Ac4g09451 Beta vulgaris HOM05D000162 ORTHO05D000090 7.7e-07 57.8 115 39.1
Ca_31091_v3 Cicer arietinum L. HOM05D008100 ORTHO05D009715 7.7e-07 57.8 91 37.4
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 7.7e-07 57.8 74 40.5
Migut.F00914 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.0e-06 57.4 107 28.0
HanXRQChr10g0281361 Helianthus annuus HOM05D000162 ORTHO05D000090 1.0e-06 57.4 85 37.6
Medtr2g048635 Medicago truncatula HOM05D010072 ORTHO05D011797 1.0e-06 57.4 106 41.5
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 1.0e-06 57.4 112 33.9
Sed0001810 Sechium edule HOM05D002453 ORTHO05D002107 1.0e-06 57.4 86 34.9
Sed0019268 Sechium edule HOM05D002453 ORTHO05D002107 1.0e-06 57.4 86 34.9
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 1.3e-06 57.0 103 32.0
Haze_03424 Corylus avellana HOM05D000027 ORTHO05D000500 1.3e-06 57.0 112 32.1
MELO3C009312.2 Cucumis melo HOM05D000855 ORTHO05D008530 1.3e-06 57.0 133 30.8
Migut.G00831 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.3e-06 57.0 117 31.6
FAN21G2679 Fragaria x ananassa HOM05D009519 ORTHO05D010307 1.3e-06 57.0 67 43.3
Rhsim13G0031600 Rhododendron simsii HOM05D001376 ORTHO05D003384 1.3e-06 57.0 108 34.3
Sed0017496 Sechium edule HOM05D000855 ORTHO05D008530 1.3e-06 57.0 133 31.6
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 1.7e-06 56.6 105 25.7
ClCG10G020580 Citrullus lanatus HOM05D001673 ORTHO05D002312 1.7e-06 56.6 113 32.7
FAN16G1190 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.7e-06 56.6 99 34.3
HanXRQChr14g0435491 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-06 56.6 86 32.6
Phvul.007G163500 Phaseolus vulgaris HOM05D000855 ORTHO05D008530 1.7e-06 56.6 115 33.0
BcaB05g23329 Brassica carinata HOM05D007660 ORTHO05D009442 2.2e-06 56.2 102 27.5
ECA240G3926 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.2e-06 56.2 108 40.7
MD04G1014400 Malus domestica HOM05D037646 ORTHO05D036303 2.2e-06 56.2 66 39.4
Medtr1g054655 Medicago truncatula HOM05D010072 ORTHO05D011797 2.2e-06 56.2 110 31.8
Aqoxy4G03187 Aquilegia oxysepala HOM05D000855 ORTHO05D008530 2.9e-06 55.8 133 30.8
A02p04930 Brassica napus HOM05D007660 ORTHO05D009442 2.9e-06 55.8 104 27.9
Nitab4.5_0000556g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.9e-06 55.8 124 27.4
MD03G1113800 Malus domestica HOM05D019995 ORTHO05D012019 3.8e-06 55.5 44 54.5
Nn2g12986 Nelumbo nucifera HOM05D000855 ORTHO05D008530 3.8e-06 55.5 133 31.6
QL07p045308 Quercus lobata HOM05D000855 ORTHO05D008530 3.8e-06 55.5 114 33.3
BraA02t05452Z Brassica rapa HOM05D007660 ORTHO05D009442 5.0e-06 55.1 104 27.9
Cfa017505 Carpinus fangiana HOM05D000855 ORTHO05D008530 5.0e-06 55.1 133 30.8
AUR62005291 Chenopodium quinoa HOM05D000162 ORTHO05D011797 5.0e-06 55.1 81 42.0
Haze_20657 Corylus avellana HOM05D000855 ORTHO05D008530 5.0e-06 55.1 133 30.8
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 5.0e-06 55.1 79 44.3
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 5.0e-06 55.1 123 35.8
FvH4_6g15290 Fragaria vesca HOM05D000855 ORTHO05D008530 6.5e-06 54.7 114 32.5
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 6.5e-06 54.7 108 35.2
Hma1.2p1_0111F.1_g053860 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 6.5e-06 54.7 108 35.2
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 6.5e-06 54.7 109 32.1
Psat6g067680 Pisum sativum HOM05D000855 ORTHO05D008530 6.5e-06 54.7 133 29.3
Prupe.6G241600 Prunus persica HOM05D000855 ORTHO05D008530 6.5e-06 54.7 114 32.5
EL10Ac4g09824 Beta vulgaris HOM05D000162 ORTHO05D000090 8.5e-06 54.3 68 47.1
FAN25G0292 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.5e-06 54.3 109 32.1
Glyma.07G100300 Glycine max HOM05D000162 ORTHO05D000090 8.5e-06 54.3 112 33.9
PGR142G0989 Punica granatum HOM05D000855 ORTHO05D008530 8.5e-06 54.3 115 28.7
QL04p064912 Quercus lobata HOM05D000162 ORTHO05D000090 8.5e-06 54.3 93 32.3
SEGI_34053 Sequoiadendron giganteum HOM05D006174 ORTHO05D007987 8.5e-06 54.3 97 33.0


User provided reference genes

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