Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 8.3e-135 483.8 260 100.0
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 7.4e-67 258.1 179 75.4
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 1.3e-66 257.3 174 76.4
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 8.2e-66 254.6 153 90.2
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 2.4e-65 253.1 174 71.8
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 2.4e-65 253.1 174 71.8
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 4.1e-65 252.3 176 73.9
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 4.1e-65 252.3 174 75.3
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.1e-65 252.3 174 76.4
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.1e-65 252.3 174 76.4
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 4.1e-65 252.3 174 76.4
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.1e-65 251.1 154 80.5
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 9.1e-65 251.1 176 79.0
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 1.2e-64 250.8 153 81.0
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 1.2e-64 250.8 174 76.4
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 1.0e-63 247.7 169 72.8
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 1.3e-63 247.3 174 74.7
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 5.0e-63 245.4 154 79.9
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 8.5e-63 244.6 196 64.8
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 2.5e-62 243.0 154 79.2
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 4.2e-62 242.3 174 75.9
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 1.2e-61 240.7 174 71.3
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 1.2e-61 240.7 160 85.0
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 4.6e-61 238.8 176 71.6
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 6.1e-61 238.4 177 71.8
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 1.0e-60 237.7 174 73.6
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.8e-60 236.9 175 69.7
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.8e-60 236.9 174 75.9
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.8e-60 236.9 152 78.3
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 2.3e-60 236.5 154 77.3
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 3.0e-60 236.1 154 74.7
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 3.9e-60 235.7 189 63.5
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 6.7e-60 235.0 154 77.9
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 6.7e-60 235.0 176 74.4
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 6.7e-60 235.0 176 71.0
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.1e-59 234.2 174 71.3
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 1.1e-59 234.2 174 71.3
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 1.5e-59 233.8 174 71.3
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 2.0e-59 233.4 174 71.3
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.0e-59 233.4 174 71.3
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 2.0e-59 233.4 174 70.1
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.3e-59 232.6 174 71.3
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 3.3e-59 232.6 174 71.3
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.3e-59 232.6 174 70.7
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 3.3e-59 232.6 154 76.0
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 4.4e-59 232.3 175 70.3
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 4.4e-59 232.3 144 80.6
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 5.7e-59 231.9 153 74.5
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 7.4e-59 231.5 152 77.6
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 9.7e-59 231.1 174 70.7
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 1.7e-58 230.3 176 69.3
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 2.2e-58 229.9 175 70.9
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 2.2e-58 229.9 154 75.3
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 3.7e-58 229.2 150 75.3
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 3.7e-58 229.2 174 68.4
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 8.2e-58 228.0 174 67.2
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 8.2e-58 228.0 152 74.3
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.1e-57 227.6 151 72.8
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 1.1e-57 227.6 168 69.6
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 1.4e-57 227.3 177 68.4
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.4e-57 226.5 154 72.1
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.4e-57 226.5 154 72.1
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 4.1e-57 225.7 174 70.7
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 5.3e-57 225.3 175 66.9
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 6.9e-57 224.9 175 67.4
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 6.9e-57 224.9 167 72.5
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 1.5e-56 223.8 153 73.9
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 2.6e-56 223.0 151 73.5
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 5.9e-56 221.9 151 72.8
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 7.7e-56 221.5 159 72.3
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 7.7e-56 221.5 174 66.7
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.3e-55 220.7 174 66.7
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.7e-55 220.3 153 71.9
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 6.5e-55 218.4 149 75.2
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.5e-55 218.4 152 72.4
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 1.9e-54 216.9 175 66.3
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 2.7e-53 213.0 181 64.1
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 4.7e-53 212.2 153 73.9
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 1.4e-52 210.7 152 69.7
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 8.8e-52 208.0 154 71.4
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 1.1e-51 207.6 176 65.3
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 1.5e-51 207.2 150 68.0
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 2.8e-50 203.0 180 63.3
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 6.3e-50 201.8 155 71.0
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 6.3e-50 201.8 154 68.8
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 6.3e-50 201.8 154 68.8
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 6.3e-50 201.8 154 68.8
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 6.3e-50 201.8 154 68.8
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 1.1e-49 201.1 175 62.9
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 1.1e-49 201.1 174 64.4
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.4e-49 200.7 157 70.1
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.4e-49 200.7 157 70.1
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 2.4e-49 199.9 153 68.0
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 2.4e-49 199.9 153 68.0
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 2.4e-49 199.9 158 71.5
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 9.1e-49 198.0 149 68.5
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 3.8e-47 192.6 174 63.2
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 5.0e-47 192.2 179 59.8
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.7e-44 181.8 115 76.5
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 9.7e-43 177.9 137 67.9
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 1.3e-42 177.6 115 74.8
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 5.3e-41 172.2 153 54.2
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 5.5e-38 162.2 151 51.7
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 4.4e-35 152.5 151 49.0
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 9.1e-33 144.8 152 53.9
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 3.5e-32 142.9 153 45.8
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 8.6e-31 138.3 115 62.6
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.3e-22 108.6 152 46.1
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 1.4e-20 104.4 96 54.2
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.0e-19 100.5 76 65.8
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 5.8e-19 99.0 108 50.9
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 7.3e-14 82.0 73 58.9
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 2.0e-11 73.9 61 65.6
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 4.4e-11 72.8 101 50.5
Nn8g39713 Nelumbo nucifera HOM05D006880 ORTHO05D008638 5.6e-06 55.8 33 75.8


User provided reference genes

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