Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09840 Davidia involucrata HOM05D008203 ORTHO05D010058 2.0e-115 419.1 202 100.0
Dinv02734 Davidia involucrata HOM05D008203 ORTHO05D010058 1.1e-113 413.3 202 98.5
Dinv17958 Davidia involucrata HOM05D008203 ORTHO05D010058 1.1e-113 413.3 202 98.5
Dinv03878 Davidia involucrata HOM05D008203 ORTHO05D010058 9.1e-113 410.2 202 97.5
Dinv04450 Davidia involucrata HOM05D008203 ORTHO05D010058 9.1e-113 410.2 202 97.0
Dinv26317 Davidia involucrata HOM05D008203 ORTHO05D010058 2.0e-112 409.1 202 98.0
Dinv25373 Davidia involucrata HOM05D008203 ORTHO05D010058 7.7e-112 407.1 202 97.0
Dinv24543 Davidia involucrata HOM05D008203 ORTHO05D010058 6.5e-111 404.1 202 96.5
Dinv17953 Davidia involucrata HOM05D008203 ORTHO05D010058 8.5e-111 403.7 202 96.0
Dinv35176 Davidia involucrata HOM05D008203 ORTHO05D010058 8.5e-111 403.7 202 97.0
Dinv01730 Davidia involucrata HOM05D008203 ORTHO05D010058 1.6e-109 399.4 202 96.0
Dinv15060 Davidia involucrata HOM05D008203 ORTHO05D010058 1.1e-81 307.0 152 96.7
Dinv09224 Davidia involucrata HOM05D008203 ORTHO05D010058 8.6e-79 297.4 155 92.3
Dinv42810 Davidia involucrata HOM05D008203 ORTHO05D010058 3.6e-77 292.0 155 91.6
Dinv43291 Davidia involucrata HOM05D008203 ORTHO05D010058 3.6e-77 292.0 155 91.6
Dinv35862 Davidia involucrata HOM05D008203 ORTHO05D010058 9.2e-73 277.3 135 97.8
Dinv03186 Davidia involucrata HOM05D008203 ORTHO05D010058 2.3e-71 272.7 153 88.9
Dinv28270 Davidia involucrata HOM05D008203 ORTHO05D010058 2.3e-71 272.7 153 88.9
Dinv41236 Davidia involucrata HOM05D008203 ORTHO05D010058 2.3e-71 272.7 153 88.9
Dinv26295 Davidia involucrata HOM05D008203 ORTHO05D010058 1.9e-70 269.6 134 97.0
Dinv10896 Davidia involucrata HOM05D008203 ORTHO05D001742 5.6e-70 268.1 134 94.8
Dinv15828 Davidia involucrata HOM05D008203 ORTHO05D010058 7.3e-70 267.7 134 96.3
Dinv01748 Davidia involucrata HOM05D008203 ORTHO05D010058 9.5e-70 267.3 153 87.6
Dinv36938 Davidia involucrata HOM05D008203 ORTHO05D010058 2.1e-69 266.2 134 94.0
Dinv29071 Davidia involucrata HOM05D008203 ORTHO05D010058 4.7e-69 265.0 153 86.3
Dinv21723 Davidia involucrata HOM05D008203 ORTHO05D010058 2.6e-67 259.2 128 95.3
Dinv30322 Davidia involucrata HOM05D008203 ORTHO05D010058 2.4e-65 252.7 134 89.6
Dinv11113 Davidia involucrata HOM05D008203 ORTHO05D010058 4.6e-64 248.4 153 82.4
Hma1.2p1_0487F.1_g163640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.5e-54 214.2 185 58.9
Hma1.2p1_1466F.1_g285450 Hydrangea macrophylla HOM05D008203 ORTHO05D010058 9.5e-54 214.2 185 58.9
Hma1.2p1_0020F.1_g013900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-53 212.6 185 58.4
Hma1.2p1_0055F.1_g031350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-53 212.6 185 58.4
Hma1.2p1_0704F.1_g206830 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-53 212.6 185 58.4
Hma1.2p1_0909F.1_g235780 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-53 212.6 185 58.4
Hma1.2p1_1257F.1_g270760 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-53 212.6 185 58.9
Hma1.2p1_1473F.1_g285740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-53 212.6 185 58.4
Dinv27624 Davidia involucrata HOM05D008203 ORTHO05D010058 3.9e-47 192.2 96 92.7
Dinv08775 Davidia involucrata HOM05D008203 ORTHO05D010058 2.4e-44 183.0 119 75.6
Dinv39229 Davidia involucrata HOM05D008203 ORTHO05D010058 2.4e-44 183.0 89 94.4
Dinv07611 Davidia involucrata HOM05D008203 ORTHO05D010058 1.3e-42 177.2 132 62.1
Hma1.2p1_0240F.1_g100330 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-40 169.9 155 54.8
Dinv12381 Davidia involucrata HOM05D008203 ORTHO05D010058 6.6e-39 164.9 106 79.2
Dinv19910 Davidia involucrata HOM05D008203 ORTHO05D010058 1.1e-38 164.1 83 94.0
Dinv01680 Davidia involucrata HOM05D008203 ORTHO05D010058 6.9e-36 154.8 95 81.1
Dinv19459 Davidia involucrata HOM05D008203 ORTHO05D010058 6.9e-36 154.8 80 90.0
Hma1.2p1_0445F.1_g154390 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.9e-36 154.8 135 60.0
Dinv15384 Davidia involucrata HOM05D008203 ORTHO05D010058 6.4e-34 148.3 155 48.4
Dinv23878 Davidia involucrata HOM05D008203 ORTHO05D010058 1.9e-33 146.7 77 88.3
Hma1.2p1_2319F.1_g319830 Hydrangea macrophylla HOM05D008203 ORTHO05D010058 4.8e-29 132.1 135 49.6
Dinv05912 Davidia involucrata HOM05D008203 ORTHO05D010058 9.9e-27 124.4 61 96.7
Dinv28148 Davidia involucrata HOM05D008203 ORTHO05D010058 3.2e-25 119.4 185 39.5
Dinv13174 Davidia involucrata HOM05D008203 ORTHO05D010058 3.5e-24 115.9 127 44.9
Rhsim01G0005300 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.0e-20 102.4 112 43.8
Rhsim06G0124700 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.0e-20 102.4 112 43.8
Rhsim09G0059500 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.0e-20 102.4 112 43.8
Rhsim11G0143300 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.0e-20 102.4 112 43.8
CSS0003176 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.3e-20 102.1 108 48.1
Rhsim11G0055700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.5e-19 100.5 112 42.0
Dinv05605 Davidia involucrata HOM05D008203 ORTHO05D010058 5.8e-19 98.6 59 66.1
Rhsim06G0096200 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.2e-18 96.7 176 35.2
Rhsim13G0145400 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.2e-18 96.7 112 42.0
RhsimUnG0155200 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.9e-18 96.3 109 42.2
Rhsim08G0151700 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.1e-17 91.7 114 39.5
Rhsim06G0097800 Rhododendron simsii HOM05D000017 ORTHO05D010058 1.2e-16 90.9 110 37.3
GSVIVG01014078001 Vitis vinifera HOM05D000017 ORTHO05D000013 2.1e-16 90.1 114 36.0
Rhsim05G0107200 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.0e-16 88.6 177 33.3
Peaxi162Scf00349g00074 Petunia axillaris HOM05D000017 ORTHO05D000013 1.0e-15 87.8 123 33.3
Sopen01g001710 Solanum pennellii HOM05D000017 ORTHO05D000013 3.9e-15 85.9 123 31.7
Hma1.2p1_0062F.1_g034320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.1e-15 85.5 157 31.2
Rhsim05G0108200 Rhododendron simsii HOM05D008203 ORTHO05D010058 6.7e-15 85.1 152 31.6
Rhsim09G0072900 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.7e-15 84.7 158 32.3
Solyc01g005700.3 Solanum lycopersicum HOM05D000017 ORTHO05D000013 8.7e-15 84.7 123 30.9
RhsimUnG0240100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.9e-14 83.6 158 31.6
Nitab4.5_0001730g0080 Nicotiana tabacum HOM05D008577 ORTHO05D010519 2.5e-14 83.2 123 30.9
Nitab4.5_0011238g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.3e-14 82.8 123 30.9
Hma1.2p1_0062F.1_g034250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.7e-14 82.0 179 29.1
Rhsim08G0133700 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.7e-14 82.0 112 38.4
Actinidia16256 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.3e-13 80.9 149 33.6
CSS0013232 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-13 80.5 103 39.8
Rhsim13G0165500 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.1e-13 80.1 110 36.4
Hund19507 Selenicereus undatus HOM05D000017 ORTHO05D000013 6.2e-13 78.6 107 37.4
Rhsim13G0231800 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-12 77.8 91 39.6
Rhsim10G0108100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.8e-12 77.0 158 31.6
Dinv17549 Davidia involucrata HOM05D008203 ORTHO05D010058 6.9e-12 75.1 37 81.1
vmacro04230 Vaccinium macrocarpon HOM05D008577 ORTHO05D010519 6.9e-12 75.1 91 39.6
CSS0037974 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.5e-11 73.9 152 30.9
Actinidia16253 Actinidia chinensis HOM05D000017 ORTHO05D000013 4.5e-11 72.4 183 27.9
Rhsim12G0084000 Rhododendron simsii HOM05D000017 ORTHO05D010058 2.2e-10 70.1 160 29.4
RcHm_v2.0_Chr4g0384731 Rosa chinensis HOM05D000017 ORTHO05D000013 2.9e-10 69.7 122 31.1
RcHm_v2.0_Chr2g0096851 Rosa chinensis HOM05D000017 ORTHO05D000013 8.4e-10 68.2 122 31.1
CANSAT11G0754 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-09 67.8 110 32.7
FAN06G1721 Fragaria x ananassa HOM05D000017 ORTHO05D000013 1.1e-09 67.8 144 29.2
RcHm_v2.0_Chr7g0220031 Rosa chinensis HOM05D000017 ORTHO05D000013 1.1e-09 67.8 118 31.4
RcHm_v2.0_Chr5g0080361 Rosa chinensis HOM05D000017 ORTHO05D000013 4.2e-09 65.9 86 37.2
FvH4_7g20282 Fragaria vesca HOM05D000017 ORTHO05D000013 5.5e-09 65.5 144 29.2
PGR102G2539 Punica granatum HOM05D000017 ORTHO05D000013 5.5e-09 65.5 110 29.1
FAN21G0343 Fragaria x ananassa HOM05D000017 ORTHO05D000013 9.3e-09 64.7 112 28.6
GSVIVG01023989001 Vitis vinifera HOM05D000017 ORTHO05D000013 9.3e-09 64.7 123 29.3
Rhsim07G0149400 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-08 64.3 65 49.2
Dinv12218 Davidia involucrata HOM05D008203 ORTHO05D010058 1.6e-08 63.9 42 71.4
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-08 63.9 102 31.4
Dinv29502 Davidia involucrata HOM05D000017 ORTHO05D000013 2.7e-08 63.2 105 35.2
Dinv01475 Davidia involucrata HOM05D000017 ORTHO05D000013 6.1e-08 62.0 108 38.0
FAN01G1465 Fragaria x ananassa HOM05D000017 ORTHO05D000013 6.1e-08 62.0 101 31.7
FAN28G0297 Fragaria x ananassa HOM05D000017 ORTHO05D000013 6.1e-08 62.0 96 34.4
Nn4g26534 Nelumbo nucifera HOM05D000017 ORTHO05D000013 7.9e-08 61.6 107 30.8
FvH4_3g40971 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-07 60.8 178 25.8
FvH4_7g30371 Fragaria vesca HOM05D000017 ORTHO05D000013 1.3e-07 60.8 101 29.7
Nn4g26520 Nelumbo nucifera HOM05D000017 ORTHO05D000013 1.3e-07 60.8 120 32.5
MSTRG.9720 Avicennia marina HOM05D000017 ORTHO05D000013 1.8e-07 60.5 111 32.4
CANSAT56G3380 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-07 60.5 107 27.1
Prupe.6G181000 Prunus persica HOM05D000017 ORTHO05D000013 1.8e-07 60.5 110 31.8
SHI39022 Sapria himalayana HOM05D000017 ORTHO05D000013 2.3e-07 60.1 110 31.8
FvH4_6g37972 Fragaria vesca HOM05D000017 ORTHO05D000013 3.0e-07 59.7 178 25.8
TWI79G0048 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.0e-07 59.7 106 32.1
CANSAT54G2251 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-07 59.3 93 29.0
FvH4_6g33561 Fragaria vesca HOM05D000017 ORTHO05D000013 3.9e-07 59.3 178 25.8
FAN06G1204 Fragaria x ananassa HOM05D000017 ORTHO05D000013 3.9e-07 59.3 101 29.7
FAN11G1406 Fragaria x ananassa HOM05D000017 ORTHO05D000013 3.9e-07 59.3 84 33.3
FvH4_3g32421 Fragaria vesca HOM05D000017 ORTHO05D000013 5.1e-07 58.9 174 25.9
FvH4_5g24281 Fragaria vesca HOM05D000017 ORTHO05D000013 5.1e-07 58.9 82 34.1
FvH4_6g31341 Fragaria vesca HOM05D000017 ORTHO05D000013 5.1e-07 58.9 181 26.0
CANSAT25G3367 Cannabis sativa HOM05D000017 ORTHO05D000013 6.7e-07 58.5 98 31.6
Sabra02G0130100 Salix brachista HOM05D000017 ORTHO05D000013 6.7e-07 58.5 112 27.7
SpUn0117_0030 Schrenkiella parvula HOM05D008420 ORTHO05D009795 6.7e-07 58.5 66 39.4
Lalb_Chr21g0310071 Lupinus albus HOM05D000017 ORTHO05D000013 8.7e-07 58.2 110 28.2
TWI09G0785 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.7e-07 58.2 102 33.3
Rhsim05G0122200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-06 57.8 121 30.6
TWI23G0845 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-06 57.8 106 31.1
ECA240G4090 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.9e-06 57.0 115 26.1
SHI00940 Sapria himalayana HOM05D000017 ORTHO05D000013 1.9e-06 57.0 88 35.2
Hund04750 Selenicereus undatus HOM05D000170 ORTHO05D000159 2.5e-06 56.6 95 35.8
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-06 56.6 109 31.2
CAN.G65.63 Capsicum annuum HOM05D000017 ORTHO05D000013 3.3e-06 56.2 84 33.3
Hma1.2p1_0182F.1_g080140 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-06 56.2 97 29.9
Os10g0104700 Oryza sativa ssp. japonica HOM05D000017 ORTHO05D000013 3.3e-06 56.2 109 29.4
Prupe.7G251000 Prunus persica HOM05D000017 ORTHO05D000013 3.3e-06 56.2 102 33.3
PGR004G0931 Punica granatum HOM05D000017 ORTHO05D000013 3.3e-06 56.2 68 36.8
TWI75G0721 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.3e-06 56.2 102 32.4
FvH4_4g09692 Fragaria vesca HOM05D000017 ORTHO05D000013 4.3e-06 55.8 178 25.3
Lj7C243T2 Lonicera japonica HOM05D000017 ORTHO05D000013 4.3e-06 55.8 77 33.8
Nn3g21926 Nelumbo nucifera HOM05D000017 ORTHO05D000013 4.3e-06 55.8 112 29.5
RcHm_v2.0_Chr5g0037961 Rosa chinensis HOM05D000017 ORTHO05D000013 4.3e-06 55.8 89 30.3
RcHm_v2.0_Chr7g0188661 Rosa chinensis HOM05D000017 ORTHO05D009451 4.3e-06 55.8 89 30.3
RcHm_v2.0_Chr7g0230091 Rosa chinensis HOM05D000017 ORTHO05D000013 4.3e-06 55.8 98 33.7
CANSAT11G1094 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-06 55.5 87 31.0
CANSAT56G2167 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-06 55.5 98 30.6
Lj4C930T4 Lonicera japonica HOM05D000017 ORTHO05D000013 5.7e-06 55.5 152 28.9
MD02G1020500 Malus domestica HOM05D000017 ORTHO05D000013 5.7e-06 55.5 118 29.7
PSO017G1951 Papaver somniferum HOM05D000017 ORTHO05D000013 5.7e-06 55.5 109 26.6
Sp4g09020 Schrenkiella parvula HOM05D008420 ORTHO05D009795 5.7e-06 55.5 52 44.2
TAR118G0002 Trochodendron aralioides HOM05D000017 ORTHO05D000013 5.7e-06 55.5 80 31.2
TAR286G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 5.7e-06 55.5 80 31.2
TAR445G0003 Trochodendron aralioides HOM05D000017 ORTHO05D000013 5.7e-06 55.5 80 31.2
TAR640G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 5.7e-06 55.5 80 31.2
CANSAT78G2065 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-06 55.1 177 24.3
Ciclev10007450m.g Citrus clementina HOM05D000017 ORTHO05D000013 7.4e-06 55.1 117 30.8
ECA240G1233 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.4e-06 55.1 50 40.0
Aqoxy7G01806 Aquilegia oxysepala HOM05D000017 ORTHO05D000013 9.7e-06 54.7 81 32.1
CANSAT11G0373 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-06 54.7 58 39.7
Lj6A103T44 Lonicera japonica HOM05D000017 ORTHO05D000013 9.7e-06 54.7 117 29.9
Nitab4.5_0000477g0150 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.7e-06 54.7 110 27.3
TAR123G0002 Trochodendron aralioides HOM05D000017 ORTHO05D000013 9.7e-06 54.7 82 34.1


User provided reference genes

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