Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 8.0e-112 407.1 210 100.0
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.9e-36 156.8 118 72.0
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 5.7e-33 145.2 123 66.7
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 5.7e-33 145.2 127 63.0
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 5.7e-33 145.2 122 66.4
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 9.6e-33 144.4 126 64.3
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 6.9e-31 138.3 118 63.6
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 2.6e-30 136.3 117 60.7
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 3.4e-30 136.0 118 62.7
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 5.8e-30 135.2 131 58.8
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 7.6e-30 134.8 118 65.3
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 1.7e-29 133.7 130 63.1
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.7e-29 133.7 127 62.2
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 2.2e-29 133.3 127 60.6
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 8.4e-29 131.3 116 63.8
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 8.4e-29 131.3 116 59.5
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.4e-28 130.6 137 59.1
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-28 130.2 98 68.4
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-28 130.2 98 68.4
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 2.5e-28 129.8 129 61.2
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 1.2e-27 127.5 102 65.7
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.2e-27 127.5 102 65.7
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 1.2e-27 127.5 79 77.2
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 2.1e-27 126.7 101 62.4
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 2.1e-27 126.7 120 63.3
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 2.7e-27 126.3 121 62.0
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.5e-27 125.9 124 57.3
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.5e-27 125.9 124 57.3
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 3.5e-27 125.9 82 73.2
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 4.6e-27 125.6 118 60.2
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 6.1e-27 125.2 114 65.8
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 6.1e-27 125.2 95 67.4
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 6.1e-27 125.2 125 59.2
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 2.3e-26 123.2 124 56.5
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 3.9e-26 122.5 125 57.6
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 3.9e-26 122.5 119 58.8
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 5.1e-26 122.1 125 60.0
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 6.7e-26 121.7 117 58.1
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 8.7e-26 121.3 122 55.7
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 1.1e-25 120.9 111 59.5
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 1.5e-25 120.6 111 58.6
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 1.9e-25 120.2 141 54.6
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 1.9e-25 120.2 88 72.7
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 3.3e-25 119.4 88 65.9
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 3.3e-25 119.4 92 64.1
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 3.3e-25 119.4 126 54.0
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 7.4e-25 118.2 115 60.0
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.6e-24 117.1 91 69.2
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 2.8e-24 116.3 87 67.8
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 6.3e-24 115.2 101 61.4
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.1e-23 114.4 89 66.3
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 1.8e-23 113.6 111 58.6
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.4e-23 113.2 95 62.1
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 2.4e-23 113.2 88 68.2
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 2.4e-23 113.2 121 55.4
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 2.4e-23 113.2 79 70.9
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 4.1e-23 112.5 85 68.2
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 4.1e-23 112.5 83 72.3
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 5.3e-23 112.1 88 67.0
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 5.3e-23 112.1 88 67.0
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 5.3e-23 112.1 89 67.4
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 6.9e-23 111.7 88 67.0
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 6.9e-23 111.7 80 66.2
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 6.9e-23 111.7 88 68.2
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 9.0e-23 111.3 85 67.1
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 9.0e-23 111.3 88 67.0
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 9.0e-23 111.3 79 67.1
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 9.0e-23 111.3 101 61.4
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 1.2e-22 110.9 120 56.7
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.5e-22 110.5 103 63.1
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 1.5e-22 110.5 120 54.2
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 1.5e-22 110.5 127 52.8
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 2.0e-22 110.2 85 70.6
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 2.0e-22 110.2 85 70.6
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 2.0e-22 110.2 85 70.6
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 3.4e-22 109.4 126 50.0
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 4.5e-22 109.0 85 68.2
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 5.9e-22 108.6 84 63.1
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 1.0e-21 107.8 102 61.8
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 1.0e-21 107.8 107 58.9
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 1.0e-21 107.8 110 57.3
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.3e-21 107.5 104 60.6
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 1.3e-21 107.5 139 46.0
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 1.7e-21 107.1 79 62.0
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.7e-21 107.1 81 64.2
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 2.9e-21 106.3 102 60.8
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 2.9e-21 106.3 80 63.8
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 3.8e-21 105.9 93 60.2
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 5.0e-21 105.5 80 62.5
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 1.4e-20 104.0 72 70.8
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 1.4e-20 104.0 79 63.3
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 1.4e-20 104.0 93 58.1
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 1.4e-20 104.0 106 52.8
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-20 102.8 63 79.4
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-20 102.8 63 79.4
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 4.2e-20 102.4 128 50.0
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 4.2e-20 102.4 80 67.5
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 5.5e-20 102.1 79 62.0
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 7.9e-19 98.2 78 61.5
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 1.8e-18 97.1 83 59.0
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 3.0e-18 96.3 96 52.1
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 2.0e-17 93.6 72 68.1
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 2.0e-17 93.6 79 60.8
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 4.3e-17 92.4 62 74.2
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 5.7e-17 92.0 97 55.7
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 5.7e-17 92.0 88 53.4
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 9.7e-17 91.3 60 73.3
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.3e-16 90.9 95 52.6
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.8e-16 89.7 195 34.9
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 6.3e-16 88.6 92 55.4
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 8.2e-16 88.2 122 41.8
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 7.7e-14 81.6 58 74.1
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 6.5e-13 78.6 84 45.2
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.7e-11 73.2 52 69.2
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 3.0e-10 69.7 64 51.6
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 7.4e-09 65.1 50 52.0
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 3.7e-08 62.8 63 55.6


User provided reference genes

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