Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09734 Davidia involucrata HOM05D021224 ORTHO05D016463 7.4e-141 503.8 247 100.0
Dinv03985 Davidia involucrata HOM05D021224 ORTHO05D016463 1.0e-73 280.8 201 74.1
Dinv09904 Davidia involucrata HOM05D021224 ORTHO05D016463 1.2e-71 273.9 205 73.7
Dinv03987 Davidia involucrata HOM05D021224 ORTHO05D016463 5.2e-70 268.5 146 93.2
Dinv09733 Davidia involucrata HOM05D021224 ORTHO05D016463 5.3e-30 135.6 172 53.5
Dinv03986 Davidia involucrata HOM05D021224 ORTHO05D016463 3.2e-27 126.3 160 53.8
CiPaw.15G166300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-11 74.7 72 47.2
TWI12G0720 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.2e-11 72.0 71 45.1
QL02p073997 Quercus lobata HOM05D000003 ORTHO05D000004 2.7e-10 70.1 71 47.9
TAR256G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.5e-10 69.7 74 43.2
Nn4g22089 Nelumbo nucifera HOM05D000003 ORTHO05D000004 3.0e-09 66.6 75 38.7
QL02p092465 Quercus lobata HOM05D000003 ORTHO05D016463 3.0e-09 66.6 87 40.2
QL05p058297 Quercus lobata HOM05D008329 ORTHO05D010502 3.0e-09 66.6 72 43.1
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.1e-09 65.9 72 44.4
Nn1g09365 Nelumbo nucifera HOM05D000003 ORTHO05D000004 6.7e-09 65.5 75 37.3
TPR.G7198 Trifolium pratense HOM05D000003 ORTHO05D000004 6.7e-09 65.5 71 46.5
Atru.chr7.591 Acer truncatum HOM05D000003 ORTHO05D000004 8.7e-09 65.1 74 45.9
FvH4_5g04240 Fragaria vesca HOM05D000003 ORTHO05D000004 8.7e-09 65.1 75 40.0
RcHm_v2.0_Chr1g0340391 Rosa chinensis HOM05D000003 ORTHO05D000004 8.7e-09 65.1 75 36.0
Ah.07g205700 Amaranthus hybridus HOM05D000003 ORTHO05D000004 1.1e-08 64.7 72 43.1
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 1.1e-08 64.7 74 39.2
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 1.1e-08 64.7 74 33.8
QL01p018735 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-08 64.7 113 35.4
Atru.chr4.2040 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-08 63.9 71 46.5
FvH4_5g37180 Fragaria vesca HOM05D000003 ORTHO05D011454 1.9e-08 63.9 75 38.7
CiPaw.15G073500 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.3e-08 63.2 76 40.8
QL03p033496 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-08 63.2 72 37.5
QL06p005642 Quercus lobata HOM05D000003 ORTHO05D000004 5.7e-08 62.4 75 36.0
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 7.4e-08 62.0 72 34.7
Ah.11g041700 Amaranthus hybridus HOM05D000003 ORTHO05D016463 1.3e-07 61.2 72 44.4
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 1.3e-07 61.2 74 39.2
Atru.chr9.1114 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-07 60.5 79 34.2
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 2.8e-07 60.1 75 38.7
Prupe.4G011200 Prunus persica HOM05D000003 ORTHO05D000004 2.8e-07 60.1 74 41.9
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 2.8e-07 60.1 74 41.9
QL03p019721 Quercus lobata HOM05D000003 ORTHO05D000004 2.8e-07 60.1 72 36.1
QL04p082656 Quercus lobata HOM05D000003 ORTHO05D000167 2.8e-07 60.1 72 38.9
Atru.chr1.1181 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-07 59.7 71 32.4
CiPaw.06G023000 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.7e-07 59.7 75 38.7
CiPaw.14G039600 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.7e-07 59.7 72 40.3
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 3.7e-07 59.7 99 30.3
Prupe.3G135000 Prunus persica HOM05D000003 ORTHO05D000004 3.7e-07 59.7 72 43.1
QL12p023981 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-07 59.7 76 38.2
CiPaw.08G120100 Carya illinoinensis HOM05D000003 ORTHO05D000004 6.3e-07 58.9 116 34.5
FvH4_6g17021 Fragaria vesca HOM05D000003 ORTHO05D000006 6.3e-07 58.9 73 43.8
Atru.chr6.1233 Acer truncatum HOM05D000003 ORTHO05D000167 8.2e-07 58.5 80 40.0
Psat6g228600 Pisum sativum HOM05D048163 ORTHO05D016463 1.1e-06 58.2 74 41.9
QL07p013368 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 58.2 107 31.8
Atru.chr12.2439 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 57.4 71 39.4
CiPaw.07G085700 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.8e-06 57.4 75 36.0
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 57.4 72 37.5
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 57.0 101 33.7
Atru.chr11.961 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 57.0 74 40.5
Atru.chr5.2472 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 57.0 71 36.6
QL05p078226 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-06 57.0 72 41.7
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 2.4e-06 57.0 73 32.9
Ah.06g188390 Amaranthus hybridus HOM05D000003 ORTHO05D000004 3.1e-06 56.6 75 38.7
Haze_09364 Corylus avellana HOM05D000003 ORTHO05D000004 3.1e-06 56.6 72 33.3
Lj1C771G6 Lonicera japonica HOM05D000003 ORTHO05D000004 3.1e-06 56.6 76 32.9
QL02p055170 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-06 56.6 71 40.8
QL03p052584 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-06 56.6 69 37.7
Atru.chr2.2490 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 56.2 74 39.2
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-06 56.2 72 34.7
CiPaw.16G041700 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.3e-06 55.8 80 36.2
QL01p044414 Quercus lobata HOM05D000414 ORTHO05D000276 5.3e-06 55.8 72 38.9
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 5.3e-06 55.8 72 38.9
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 6.9e-06 55.5 79 38.0
Atru.chr9.813 Acer truncatum HOM05D000003 ORTHO05D000004 6.9e-06 55.5 75 44.0
QL04p096362 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-06 55.5 70 41.4
Atru.chr12.2514 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-06 55.1 88 37.5
Atru.chr4.252 Acer truncatum HOM05D000003 ORTHO05D000004 9.0e-06 55.1 75 42.7
CiPaw.13G119100 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.0e-06 55.1 70 37.1
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 9.0e-06 55.1 72 41.7
TAR133G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 9.0e-06 55.1 75 34.7


User provided reference genes

Program Settings