Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 1.5e-86 322.8 160 100.0
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 1.4e-52 209.9 160 65.0
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 2.7e-51 205.7 160 63.1
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 2.7e-51 205.7 160 61.9
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 2.3e-50 202.6 160 62.5
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 3.9e-50 201.8 160 65.0
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 3.9e-50 201.8 161 64.6
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 6.6e-50 201.1 160 63.1
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 2.5e-49 199.1 160 62.5
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 1.7e-45 186.4 160 55.6
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 2.2e-45 186.0 161 57.8
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 3.8e-45 185.3 160 58.1
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 4.9e-45 184.9 160 55.6
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 1.1e-44 183.7 160 58.1
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 2.4e-44 182.6 160 57.5
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 3.2e-44 182.2 149 56.4
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 5.4e-44 181.4 162 59.3
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 3.0e-42 175.6 160 54.4
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 5.1e-42 174.9 160 53.8
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 6.6e-42 174.5 161 57.1
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 6.6e-42 174.5 160 55.6
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 8.7e-42 174.1 184 51.6
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 4.3e-41 171.8 160 51.9
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 4.3e-41 171.8 163 58.9
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 7.3e-41 171.0 160 55.0
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 1.2e-40 170.2 160 53.8
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 1.2e-40 170.2 160 53.1
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 3.6e-40 168.7 161 52.8
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 3.6e-40 168.7 150 55.3
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 1.1e-39 167.2 160 55.0
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 1.4e-39 166.8 188 51.1
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 6.9e-39 164.5 161 54.7
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 6.9e-39 164.5 161 54.7
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 1.3e-37 160.2 163 49.7
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 2.2e-37 159.5 147 53.1
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 6.4e-37 157.9 163 53.4
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 6.4e-37 157.9 165 50.3
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 8.4e-37 157.5 175 50.9
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 1.4e-36 156.8 164 50.6
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.4e-36 156.0 165 52.7
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 2.4e-36 156.0 160 50.0
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.4e-36 156.0 160 51.2
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 3.2e-36 155.6 160 51.2
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 1.6e-35 153.3 147 52.4
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 2.7e-35 152.5 140 52.9
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.0e-34 150.6 161 49.7
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 2.3e-34 149.4 187 46.5
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 2.3e-34 149.4 187 47.6
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 5.1e-34 148.3 160 50.6
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 6.6e-34 147.9 163 49.7
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 1.1e-33 147.1 161 48.4
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 3.3e-33 145.6 163 46.0
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 4.3e-33 145.2 161 49.1
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 5.6e-33 144.8 186 45.7
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 7.3e-33 144.4 163 47.2
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 7.3e-33 144.4 163 49.1
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 9.6e-33 144.1 161 49.7
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 1.3e-32 143.7 161 49.1
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 2.1e-32 142.9 163 46.0
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 2.1e-32 142.9 163 46.6
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 2.8e-32 142.5 161 49.1
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 2.8e-32 142.5 165 48.5
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 3.6e-32 142.1 163 46.0
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 3.6e-32 142.1 164 45.1
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 6.2e-32 141.4 169 47.9
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 1.1e-31 140.6 163 44.8
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.4e-31 140.2 108 61.1
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 3.1e-31 139.0 166 45.2
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 3.1e-31 139.0 160 46.2
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 4.0e-31 138.7 167 49.1
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 4.0e-31 138.7 163 45.4
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 5.8e-30 134.8 167 45.5
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 7.6e-30 134.4 163 42.3
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 7.6e-30 134.4 163 42.3
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 2.2e-29 132.9 163 41.7
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 2.2e-29 132.9 163 41.7
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 2.2e-29 132.9 163 41.7
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 1.1e-28 130.6 141 46.8
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 2.4e-28 129.4 106 62.3
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 1.6e-27 126.7 163 43.6
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 2.1e-24 116.3 163 41.7
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 1.2e-22 110.5 84 59.5
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 5.8e-22 108.2 127 44.1
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 2.9e-21 105.9 163 41.1
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 6.4e-21 104.8 82 64.6
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 5.5e-20 101.7 157 39.5
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 7.1e-20 101.3 162 37.0
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 3.5e-19 99.0 164 36.6
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 3.0e-18 95.9 79 55.7
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 5.6e-17 91.7 85 50.6
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 4.8e-16 88.6 177 38.4
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 1.2e-14 84.0 96 45.8
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 2.6e-14 82.8 75 53.3
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 2.5e-12 76.3 66 57.6
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 1.0e-10 70.9 90 44.4
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 1.0e-10 70.9 90 44.4
unitig_21.g20692 Utricularia gibba HOM05D007488 ORTHO05D009461 1.0e-10 70.9 64 48.4
MBI13_g11934_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 1.6e-08 63.5 67 49.3
ATR0057G037 Amborella trichopoda HOM05D007488 ORTHO05D009461 7.7e-06 54.7 125 32.0


User provided reference genes

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