Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09703 Davidia involucrata HOM05D052520 ORTHO05D184660 1.1e-69 266.5 135 100.0
GSVIVG01033627001 Vitis vinifera HOM05D000425 ORTHO05D000373 2.4e-24 115.9 130 52.3
Dinv09706 Davidia involucrata HOM05D000425 ORTHO05D000373 6.9e-24 114.4 136 50.7
Actinidia01826 Actinidia chinensis HOM05D000425 ORTHO05D000373 9.9e-23 110.5 140 49.3
Actinidia17952 Actinidia chinensis HOM05D000425 ORTHO05D000373 5.4e-21 104.8 141 47.5
DCAR_020571 Daucus carota HOM05D000425 ORTHO05D000373 3.9e-19 98.6 142 44.4
Dinv09702 Davidia involucrata HOM05D052520 ORTHO05D179205 2.1e-17 92.8 61 75.4
TAR625G0553 Trochodendron aralioides HOM05D000425 ORTHO05D000373 4.8e-17 91.7 123 45.5
Duzib128G1058 Durio zibethinus HOM05D000425 ORTHO05D000373 1.5e-15 86.7 95 46.3
Sc13g0001140 Simmondsia chinensis HOM05D000425 ORTHO05D000373 3.4e-15 85.5 134 38.8
Atru.chr1.1441 Acer truncatum HOM05D000425 ORTHO05D000373 5.8e-15 84.7 133 43.6
TWI53G1684 Tripterygium wilfordii HOM05D000425 ORTHO05D000373 1.9e-13 79.7 111 44.1
QL07p010372 Quercus lobata HOM05D000425 ORTHO05D000373 2.4e-13 79.3 128 41.4
SalBow6G6291 Salvia bowleyana HOM05D000425 ORTHO05D000373 2.1e-12 76.3 132 38.6
Haze_20225 Corylus avellana HOM05D000425 ORTHO05D000373 2.7e-12 75.9 125 41.6
Rhsim12G0009400 Rhododendron simsii HOM05D000425 ORTHO05D000373 7.9e-12 74.3 89 44.9
Sc19g0008200 Simmondsia chinensis HOM05D000425 ORTHO05D000373 7.9e-12 74.3 139 34.5
Dinv09701 Davidia involucrata HOM05D000425 ORTHO05D000373 3.0e-11 72.4 90 57.8
Nitab4.5_0006209g0010 Nicotiana tabacum HOM05D000425 ORTHO05D000373 6.7e-11 71.2 124 37.9
Cpa.g.sc5.170 Carica papaya HOM05D000425 ORTHO05D000373 1.1e-10 70.5 136 37.5
DCAR_020570 Daucus carota HOM05D000425 ORTHO05D000373 1.1e-10 70.5 142 37.3
Hma1.2p1_0546F.1_g176300 Hydrangea macrophylla HOM05D000425 ORTHO05D000373 2.5e-10 69.3 139 36.7
Ciclev10004676m.g Citrus clementina HOM05D000425 ORTHO05D000373 3.3e-10 68.9 149 35.6
Lsat_1_v5_gn_9_29820 Lactuca sativa HOM05D000425 ORTHO05D000373 3.3e-10 68.9 134 37.3
HanXRQChr10g0289381 Helianthus annuus HOM05D000425 ORTHO05D000373 4.3e-10 68.6 83 48.2
Manes.08G060000 Manihot esculenta HOM05D000425 ORTHO05D000373 4.3e-10 68.6 134 36.6
Glyma.02G179100 Glycine max HOM05D000425 ORTHO05D000373 5.6e-10 68.2 123 38.2
Oeu059343.2 Olea europaea HOM05D000425 ORTHO05D000373 5.6e-10 68.2 131 38.9
Lalb_Chr02g0156591 Lupinus albus HOM05D000425 ORTHO05D000373 7.4e-10 67.8 121 37.2
Lj1g0000007 Lotus japonicus HOM05D000425 ORTHO05D000373 9.6e-10 67.4 127 34.6
PGR031G3291 Punica granatum HOM05D000425 ORTHO05D000373 1.6e-09 66.6 141 34.8
Cc06_g19190 Coffea canephora HOM05D000425 ORTHO05D000373 2.1e-09 66.2 128 39.8
ECA247G0054 Erigeron canadensis HOM05D000425 ORTHO05D000373 2.8e-09 65.9 101 43.6
Peaxi162Scf00076g00617 Petunia axillaris HOM05D000425 ORTHO05D000373 2.8e-09 65.9 125 38.4
Prupe.7G038500 Prunus persica HOM05D000425 ORTHO05D000373 2.8e-09 65.9 95 41.1
Ca_26015_v3 Cicer arietinum L. HOM05D000425 ORTHO05D000373 3.7e-09 65.5 111 39.6
TPR.G25098 Trifolium pratense HOM05D000425 ORTHO05D000373 3.7e-09 65.5 134 35.1
CAN.G30.27 Capsicum annuum HOM05D000425 ORTHO05D000373 4.8e-09 65.1 128 37.5
Potri.006G038700 Populus trichocarpa HOM05D000425 ORTHO05D000373 4.8e-09 65.1 137 37.2
Glyma.10G094000 Glycine max HOM05D000425 ORTHO05D000373 6.2e-09 64.7 83 44.6
Cc00_g21350 Coffea canephora HOM05D000425 ORTHO05D000373 8.2e-09 64.3 114 37.7
Psat6g117440 Pisum sativum HOM05D000425 ORTHO05D000373 8.2e-09 64.3 126 34.1
RcHm_v2.0_Chr2g0125581 Rosa chinensis HOM05D000425 ORTHO05D000373 1.1e-08 63.9 135 34.8
VMungo1215G0057 Vigna mungo HOM05D000425 ORTHO05D000373 1.4e-08 63.5 133 36.8
COL.COLO4_36667 Corchorus olitorius HOM05D000425 ORTHO05D000373 2.4e-08 62.8 92 34.8
Gohir.A02G112714 Gossypium hirsutum HOM05D000425 ORTHO05D000373 2.4e-08 62.8 120 33.3
Gorai.003G086300 Gossypium raimondii HOM05D000425 ORTHO05D000373 2.4e-08 62.8 120 33.3
Manes.08G059900 Manihot esculenta HOM05D000425 ORTHO05D000373 2.4e-08 62.8 134 33.6
Nitab4.5_0004224g0010 Nicotiana tabacum HOM05D000425 ORTHO05D000373 2.4e-08 62.8 130 38.5
BcaC02g12844 Brassica carinata HOM05D000425 ORTHO05D000373 5.3e-08 61.6 134 35.8
C04p68820 Brassica napus HOM05D000425 ORTHO05D000373 5.3e-08 61.6 134 35.8
BolC4t28385H Brassica oleracea HOM05D000425 ORTHO05D000373 5.3e-08 61.6 134 35.8
Glyma.01G218600 Glycine max HOM05D000425 ORTHO05D000373 6.9e-08 61.2 102 36.3
PGSC0003DMG400031347 Solanum tuberosum HOM05D000425 ORTHO05D000373 6.9e-08 61.2 82 41.5
A03p23110 Brassica napus HOM05D000425 ORTHO05D000373 9.0e-08 60.8 126 35.7
BraA03t11532Z Brassica rapa HOM05D000425 ORTHO05D000373 9.0e-08 60.8 126 35.7
Gohir.D03G074600 Gossypium hirsutum HOM05D000425 ORTHO05D000373 9.0e-08 60.8 120 32.5
EL10Ac3g07237 Beta vulgaris HOM05D000425 ORTHO05D000373 2.6e-07 59.3 132 32.6
BcaC01g05356 Brassica carinata HOM05D000425 ORTHO05D000373 2.6e-07 59.3 126 34.9
C03p27510 Brassica napus HOM05D000425 ORTHO05D000373 2.6e-07 59.3 126 34.9
BolC3t15127H Brassica oleracea HOM05D000425 ORTHO05D000373 2.6e-07 59.3 126 34.9
ECA247G0217 Erigeron canadensis HOM05D000425 ORTHO05D000373 2.6e-07 59.3 83 39.8
BcaNung05631 Brassica carinata HOM05D000425 ORTHO05D000373 3.4e-07 58.9 132 34.8
Sabra06G0026100 Salix brachista HOM05D000425 ORTHO05D000373 3.4e-07 58.9 144 33.3
vmacro07798 Vaccinium macrocarpon HOM05D000425 ORTHO05D000373 3.4e-07 58.9 72 41.7
Rhsim03G0039800 Rhododendron simsii HOM05D000425 ORTHO05D000373 4.5e-07 58.5 155 31.0
Solyc03g078150.3 Solanum lycopersicum HOM05D000425 ORTHO05D000373 4.5e-07 58.5 113 34.5
VMungo0720G1160 Vigna mungo HOM05D000425 ORTHO05D000373 4.5e-07 58.5 131 35.1
BcaB01g03486 Brassica carinata HOM05D000425 ORTHO05D000373 5.8e-07 58.2 126 34.1
Phvul.002G156500 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 5.8e-07 58.2 131 33.6
arahy.Tifrunner.gnm1.ann1.L53237 Arachis hypogaea HOM05D000425 ORTHO05D000373 7.6e-07 57.8 82 43.9
arahy.Tifrunner.gnm1.ann1.PBF5HM Arachis hypogaea HOM05D000425 ORTHO05D000373 7.6e-07 57.8 82 43.9
Medtr4g037690 Medicago truncatula HOM05D000425 ORTHO05D000373 7.6e-07 57.8 59 54.2
THA.LOC104824400 Tarenaya hassleriana HOM05D000425 ORTHO05D000373 1.0e-06 57.4 135 33.3
A04p31390 Brassica napus HOM05D000425 ORTHO05D000373 1.3e-06 57.0 135 34.8
BraA04t18597Z Brassica rapa HOM05D000425 ORTHO05D000373 1.3e-06 57.0 135 34.8
Ah.04g150930 Amaranthus hybridus HOM05D000425 ORTHO05D000373 1.7e-06 56.6 73 41.1
BcaC02g12847 Brassica carinata HOM05D000425 ORTHO05D000373 1.7e-06 56.6 126 34.9
Phvul.007G256500 Phaseolus vulgaris HOM05D000425 ORTHO05D000373 1.7e-06 56.6 128 32.8
Thhalv10016504m.g Eutrema salsugineum HOM05D000425 ORTHO05D000373 3.8e-06 55.5 135 35.6
Lalb_Chr14g0365841 Lupinus albus HOM05D000425 ORTHO05D000373 3.8e-06 55.5 133 33.1
Sed0014821 Sechium edule HOM05D000425 ORTHO05D000373 4.9e-06 55.1 112 35.7
SGA_v2.0_scaffold94G28541 Striga asiatica HOM05D000425 ORTHO05D000373 4.9e-06 55.1 128 35.9
Carub.0004s2350 Capsella rubella HOM05D000425 ORTHO05D000373 6.5e-06 54.7 138 34.1


User provided reference genes

Program Settings