Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 3.7e-126 454.9 233 100.0
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 1.3e-99 366.7 266 75.9
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 6.6e-99 364.4 267 70.8
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 1.9e-93 346.3 250 71.2
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 4.1e-93 345.1 267 67.8
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 1.1e-90 337.0 258 68.2
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.3e-90 335.1 250 70.8
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 9.5e-90 334.0 258 68.6
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 3.6e-89 332.0 259 67.2
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 6.2e-89 331.3 259 67.2
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 2.3e-88 329.3 242 72.3
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 2.3e-88 329.3 259 66.8
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 2.3e-88 329.3 262 64.9
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 3.1e-88 328.9 255 65.9
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 4.0e-88 328.6 262 64.5
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 4.0e-88 328.6 301 60.8
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.7e-86 322.0 240 68.8
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.7e-86 322.0 267 64.4
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 3.7e-86 322.0 241 70.1
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 4.9e-86 321.6 260 63.5
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 7.1e-85 317.8 259 64.5
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 1.6e-84 316.6 239 68.6
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.7e-84 315.8 255 63.5
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.7e-84 315.8 258 65.9
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.5e-84 315.5 241 68.5
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 4.6e-84 315.1 244 66.4
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 1.0e-83 313.9 267 62.2
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 1.3e-83 313.5 240 67.9
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 6.6e-83 311.2 239 66.5
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 1.6e-81 306.6 242 65.3
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 2.1e-81 306.2 238 66.4
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 2.8e-81 305.8 246 64.2
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.6e-81 305.4 243 64.6
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 3.6e-81 305.4 242 64.5
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.4e-80 303.5 243 65.0
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 6.8e-80 301.2 243 63.8
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 6.8e-80 301.2 240 65.4
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 8.9e-80 300.8 266 59.8
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.5e-79 300.1 242 62.4
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.4e-79 298.9 267 59.6
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 4.4e-79 298.5 266 59.4
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 4.4e-79 298.5 251 63.3
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 5.8e-79 298.1 240 64.6
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 5.8e-79 298.1 240 64.6
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 5.8e-79 298.1 266 59.0
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 5.8e-79 298.1 266 59.4
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 2.2e-78 296.2 241 65.1
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.2e-78 296.2 266 59.4
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 2.2e-78 296.2 244 63.5
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 3.8e-78 295.4 242 62.8
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 1.9e-77 293.1 237 65.0
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.4e-77 292.7 257 60.7
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.2e-77 292.4 266 58.6
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 5.4e-77 291.6 241 64.7
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 1.2e-76 290.4 240 62.5
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 2.7e-76 289.3 241 61.4
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 3.5e-76 288.9 264 58.7
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 3.5e-76 288.9 251 59.4
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 6.0e-76 288.1 241 60.6
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 6.0e-76 288.1 259 61.4
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 6.0e-76 288.1 241 60.6
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 7.8e-76 287.7 241 60.6
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 1.7e-75 286.6 255 59.6
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.3e-75 286.2 254 58.7
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 2.3e-75 286.2 240 62.5
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 1.2e-73 280.4 266 56.8
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 4.7e-73 278.5 240 59.6
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 1.1e-72 277.3 254 58.3
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.8e-72 276.6 249 61.4
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 2.4e-72 276.2 240 60.8
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 2.4e-72 276.2 239 58.2
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 1.2e-71 273.9 259 56.4
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.5e-71 273.5 214 64.5
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.5e-71 273.5 259 56.0
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 3.4e-71 272.3 258 56.2
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 1.4e-69 266.9 241 59.3
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 3.9e-67 258.8 247 57.1
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 8.7e-67 257.7 240 57.5
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 2.5e-66 256.1 289 50.5
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 3.3e-66 255.8 253 52.6
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 4.3e-66 255.4 253 53.8
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 1.6e-65 253.4 253 53.4
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.8e-65 252.7 253 52.6
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.9e-61 240.0 236 53.4
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 9.3e-61 237.7 187 63.1
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 1.4e-56 223.8 184 60.9
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 1.3e-54 217.2 182 62.6
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.7e-54 216.9 183 61.2
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.9e-54 215.3 232 47.0
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 7.1e-53 211.5 232 46.6
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 6.0e-52 208.4 182 59.3
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 2.3e-51 206.5 181 60.2
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.5e-50 203.0 182 59.3
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.2e-47 194.1 238 42.0
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 7.6e-47 191.4 175 63.4
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 1.0e-46 191.0 237 41.8
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 1.2e-44 184.1 181 55.2
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 3.9e-43 179.1 228 41.2
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.1e-42 177.6 213 51.2
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.3e-42 176.0 170 61.8
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 2.8e-41 172.9 180 53.3
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 3.1e-40 169.5 228 42.5
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 3.4e-39 166.0 252 37.7
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 4.2e-37 159.1 205 40.5
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 5.1e-35 152.1 238 37.4
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 7.4e-34 148.3 215 38.1
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 2.5e-29 133.3 147 44.2
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 9.4e-29 131.3 102 69.6
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 2.8e-25 119.8 179 34.6
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 3.7e-25 119.4 109 56.9
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 9.4e-21 104.8 182 37.4
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 9.1e-16 88.2 216 26.9
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 6.5e-14 82.0 97 37.1


User provided reference genes

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