Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 1.8e-104 382.5 184 100.0
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 5.8e-42 174.9 143 64.3
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 1.4e-32 143.7 79 82.3
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 2.5e-32 142.9 82 79.3
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 3.5e-31 139.0 145 53.1
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 2.3e-30 136.3 94 68.1
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 2.3e-30 136.3 126 56.3
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 3.0e-30 136.0 82 76.8
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 3.9e-30 135.6 82 76.8
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 8.7e-30 134.4 84 73.8
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 1.1e-29 134.0 123 56.9
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 4.3e-29 132.1 145 52.4
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 5.7e-29 131.7 82 74.4
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 7.4e-29 131.3 100 64.0
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 9.7e-29 131.0 151 50.3
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 9.7e-29 131.0 82 72.0
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 9.7e-29 131.0 123 55.3
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.3e-28 130.6 74 78.4
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.3e-28 130.6 74 78.4
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.3e-28 130.6 82 72.0
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.3e-28 130.6 82 72.0
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 2.8e-28 129.4 82 70.7
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 2.8e-28 129.4 81 74.1
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 4.8e-28 128.6 82 72.0
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 8.2e-28 127.9 82 72.0
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 1.1e-27 127.5 123 55.3
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 2.4e-27 126.3 82 72.0
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 2.4e-27 126.3 81 70.4
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 2.4e-27 126.3 82 69.5
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 3.1e-27 125.9 145 47.6
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 4.1e-27 125.6 82 70.7
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 4.1e-27 125.6 145 49.7
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 4.1e-27 125.6 145 49.0
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 5.3e-27 125.2 123 52.0
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 5.3e-27 125.2 82 72.0
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 1.2e-26 124.0 123 51.2
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 1.2e-26 124.0 80 70.0
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 1.2e-26 124.0 74 75.7
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 2.0e-26 123.2 143 46.9
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 2.6e-26 122.9 82 65.9
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 2.6e-26 122.9 124 51.6
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 3.4e-26 122.5 123 53.7
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 4.5e-26 122.1 145 49.0
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 5.9e-26 121.7 123 52.0
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 5.9e-26 121.7 81 69.1
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 5.9e-26 121.7 82 67.1
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 5.9e-26 121.7 143 48.3
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 7.7e-26 121.3 143 47.6
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 7.7e-26 121.3 126 52.4
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 1.0e-25 120.9 82 68.3
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 1.0e-25 120.9 82 68.3
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 1.0e-25 120.9 77 72.7
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 1.7e-25 120.2 82 67.1
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 1.7e-25 120.2 124 50.8
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 2.9e-25 119.4 82 67.1
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.9e-25 119.4 80 67.5
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 3.8e-25 119.0 121 50.4
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 5.0e-25 118.6 127 49.6
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 6.5e-25 118.2 146 49.3
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 6.5e-25 118.2 146 49.3
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 6.5e-25 118.2 146 49.3
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 6.5e-25 118.2 75 72.0
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 6.5e-25 118.2 123 51.2
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 1.1e-24 117.5 126 50.8
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.2e-24 115.9 123 49.6
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 5.5e-24 115.2 74 68.9
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 5.5e-24 115.2 74 70.3
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 7.2e-24 114.8 84 63.1
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 9.4e-24 114.4 123 49.6
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 2.1e-23 113.2 122 51.6
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 2.7e-23 112.8 123 48.8
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 2.7e-23 112.8 74 70.3
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 1.0e-22 110.9 81 63.0
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 5.1e-22 108.6 128 48.4
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.5e-21 107.1 118 50.8
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.0e-21 106.7 74 64.9
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 2.5e-21 106.3 74 66.2
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 7.4e-21 104.8 152 41.4
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 2.8e-20 102.8 123 44.7
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 4.8e-20 102.1 82 57.3
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 4.8e-20 102.1 79 60.8
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 6.3e-20 101.7 165 40.0
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 5.3e-19 98.6 152 40.1
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 5.3e-19 98.6 120 45.0
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 1.0e-17 94.4 66 71.2
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 1.1e-16 90.9 83 55.4
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.7e-15 86.3 127 38.6
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.7e-15 86.3 127 38.6
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 2.0e-13 80.1 93 47.3
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 4.4e-13 79.0 75 44.0
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 9.7e-13 77.8 73 49.3
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 1.7e-12 77.0 81 46.9
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 1.6e-10 70.5 144 32.6
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 2.0e-10 70.1 75 41.3
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.3e-09 67.4 41 70.7


User provided reference genes

Program Settings