Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09600 Davidia involucrata HOM05D025581 ORTHO05D000148 1.9e-43 178.7 85 100.0
Dinv34271 Davidia involucrata HOM05D025581 ORTHO05D179160 3.4e-37 157.9 111 74.8
Dinv39167 Davidia involucrata HOM05D025581 ORTHO05D000148 6.9e-30 133.7 99 71.7
Dinv43652 Davidia involucrata HOM05D000159 ORTHO05D000148 1.2e-18 96.3 46 93.5
Dinv16278 Davidia involucrata HOM05D025581 ORTHO05D185992 6.0e-18 94.0 46 91.3
Dinv44104 Davidia involucrata HOM05D000159 ORTHO05D000148 8.7e-17 90.1 48 85.4
Hma1.2p1_0341F.1_g130360 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 4.8e-15 84.3 46 80.4
CSS0050351 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.3e-12 76.3 48 68.8
GSVIVG01018204001 Vitis vinifera HOM05D000159 ORTHO05D000148 8.5e-12 73.6 44 75.0
Rhsim07G0032900 Rhododendron simsii HOM05D000159 ORTHO05D000148 2.1e-10 68.9 43 67.4
Manes.05G050900 Manihot esculenta HOM05D000159 ORTHO05D000148 4.6e-10 67.8 43 69.8
TAR375G0397 Trochodendron aralioides HOM05D000159 ORTHO05D000148 4.6e-10 67.8 46 67.4
Thecc.01G386700 Theobroma cacao HOM05D000159 ORTHO05D000148 1.8e-09 65.9 49 63.3
CiPaw.13G030500 Carya illinoinensis HOM05D000159 ORTHO05D000148 6.7e-09 63.9 45 66.7
Duzib138G1708 Durio zibethinus HOM05D000159 ORTHO05D000148 2.5e-08 62.0 49 57.1
DCAR_015860 Daucus carota HOM05D000159 ORTHO05D000148 3.3e-08 61.6 49 53.1
DCAR_015861 Daucus carota HOM05D000159 ORTHO05D000148 3.3e-08 61.6 49 53.1
Ciclev10021106m.g Citrus clementina HOM05D000159 ORTHO05D000148 5.7e-08 60.8 33 75.8
Lsat_1_v5_gn_4_44160 Lactuca sativa HOM05D000159 ORTHO05D000148 5.7e-08 60.8 53 58.5
Lj9A562T31 Lonicera japonica HOM05D000159 ORTHO05D000148 7.4e-08 60.5 52 57.7
Nn1g00968 Nelumbo nucifera HOM05D000159 ORTHO05D000148 9.7e-08 60.1 44 59.1
Atru.chr5.210 Acer truncatum HOM05D000159 ORTHO05D000148 1.3e-07 59.7 33 75.8
Haze_02733 Corylus avellana HOM05D000159 ORTHO05D000148 1.3e-07 59.7 50 58.0
Cpa.g.sc149.10 Carica papaya HOM05D000159 ORTHO05D000148 1.7e-07 59.3 51 56.9
Cc02_g24540 Coffea canephora HOM05D000159 ORTHO05D000148 1.7e-07 59.3 40 65.0
COL.COLO4_12460 Corchorus olitorius HOM05D000159 ORTHO05D000148 1.7e-07 59.3 48 56.2
Oeu061516.1 Olea europaea HOM05D000159 ORTHO05D000148 2.2e-07 58.9 48 62.5
Oeu063209.1 Olea europaea HOM05D000159 ORTHO05D000148 2.2e-07 58.9 48 60.4
Nn6g33925 Nelumbo nucifera HOM05D000159 ORTHO05D000148 2.8e-07 58.5 35 71.4
CiPaw.14G024100 Carya illinoinensis HOM05D000159 ORTHO05D000148 6.3e-07 57.4 46 63.0
Duzib133G1436 Durio zibethinus HOM05D000159 ORTHO05D000148 6.3e-07 57.4 52 53.8
TWI59G0023 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 6.3e-07 57.4 46 63.0
TWI23G0294 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 8.2e-07 57.0 46 63.0
Migut.B01572 Erythranthe guttata HOM05D000159 ORTHO05D000148 1.8e-06 55.8 33 75.8
Manes.01G270700 Manihot esculenta HOM05D000159 ORTHO05D000148 2.4e-06 55.5 44 61.4
QL04p035604 Quercus lobata HOM05D000159 ORTHO05D000148 4.1e-06 54.7 36 69.4
MSTRG.20715 Avicennia marina HOM05D000159 ORTHO05D000148 6.9e-06 53.9 47 57.4


User provided reference genes

Program Settings