Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 8.7e-196 686.8 352 100.0
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 3.7e-69 266.2 387 45.5
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 1.1e-65 254.6 369 47.7
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.3e-53 214.5 383 38.9
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.9e-49 200.7 396 37.6
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 4.0e-47 193.0 222 55.4
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 7.5e-46 188.7 360 36.9
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 9.1e-44 181.8 350 37.1
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.7e-43 180.3 347 42.4
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.3e-42 177.9 353 41.6
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 5.0e-42 176.0 373 35.9
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.5e-41 174.5 369 37.4
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 4.2e-41 172.9 361 36.8
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.6e-40 171.0 397 36.5
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 1.8e-39 167.5 354 37.3
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 3.4e-38 163.3 371 33.2
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 8.3e-37 158.7 385 34.5
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 3.1e-36 156.8 370 35.9
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.6e-35 154.5 352 35.2
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.6e-35 154.5 352 35.2
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.0e-34 151.8 368 31.8
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.3e-34 151.4 379 35.1
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.3e-34 150.6 341 32.6
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 5.0e-34 149.4 363 36.9
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 6.6e-34 149.1 357 37.0
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 4.3e-33 146.4 353 35.7
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 5.6e-33 146.0 361 34.1
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 7.3e-33 145.6 345 33.6
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 1.6e-32 144.4 372 34.1
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.1e-32 144.1 358 33.0
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 3.6e-32 143.3 394 34.0
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.8e-31 141.0 376 34.6
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.9e-31 138.7 341 33.4
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 1.2e-30 138.3 363 35.5
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 2.6e-30 137.1 345 34.2
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 3.4e-30 136.7 386 32.9
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 1.7e-29 134.4 367 33.2
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.7e-29 134.4 136 50.0
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 3.7e-29 133.3 354 33.1
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.1e-28 131.7 342 32.5
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 4.1e-28 129.8 402 33.1
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 4.1e-28 129.8 375 32.3
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 5.4e-28 129.4 346 32.1
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.6e-27 127.9 365 34.2
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 1.6e-27 127.9 365 34.2
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.9e-27 125.9 337 31.8
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 7.8e-27 125.6 360 32.8
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.3e-26 124.8 337 31.8
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.7e-26 124.4 349 33.0
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.9e-26 123.2 337 31.5
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 5.0e-26 122.9 375 32.5
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 6.6e-26 122.5 369 30.9
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.6e-26 122.1 369 32.2
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 8.6e-26 122.1 367 31.3
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 8.6e-26 122.1 221 36.7
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 8.6e-26 122.1 341 34.0
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 5.6e-25 119.4 372 28.8
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 7.3e-25 119.0 347 32.0
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 2.1e-24 117.5 376 32.2
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.8e-24 117.1 337 32.0
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 4.7e-24 116.3 351 31.9
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 4.7e-24 116.3 349 30.7
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 8.0e-24 115.5 364 29.9
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 8.0e-24 115.5 370 27.0
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.0e-23 115.2 361 31.9
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.4e-23 114.8 395 29.1
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 3.1e-23 113.6 348 31.0
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 4.0e-23 113.2 377 29.2
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 5.2e-23 112.8 378 29.4
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 8.9e-23 112.1 360 30.0
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.2e-22 111.7 346 31.5
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 1.5e-22 111.3 364 30.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.6e-22 110.5 336 30.7
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 2.6e-22 110.5 182 37.4
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 2.6e-22 110.5 351 29.1
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 2.2e-21 107.5 155 43.2
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 6.4e-21 105.9 347 28.2
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.4e-20 104.8 351 29.3
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 3.2e-20 103.6 323 29.4
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 4.1e-20 103.2 349 29.2
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 7.0e-20 102.4 346 30.6
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.2e-19 101.7 301 33.2
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 2.0e-19 100.9 366 24.9
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 2.7e-19 100.5 342 31.9
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 4.6e-19 99.8 362 29.0
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.7e-18 97.8 184 38.0
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 8.6e-18 95.5 114 43.0
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.1e-17 95.1 345 29.3
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 4.3e-17 93.2 352 28.7
PGSC0003DMG400004918 Solanum tuberosum HOM05D006874 ORTHO05D008334 4.3e-17 93.2 339 27.4
DCAR_020062 Daucus carota HOM05D006874 ORTHO05D008334 7.3e-17 92.4 335 29.6
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 7.3e-17 92.4 361 28.3
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 1.6e-16 91.3 339 27.4
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 2.8e-16 90.5 345 28.1
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 2.8e-16 90.5 347 25.9
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 4.7e-16 89.7 335 28.7
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 4.7e-16 89.7 380 25.5
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 6.2e-16 89.4 361 27.1
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.8e-15 87.8 353 25.8
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 2.3e-15 87.4 343 27.4
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 2.0e-14 84.3 327 27.2
VMungo0647G0698 Vigna mungo HOM05D006874 ORTHO05D008334 2.6e-14 84.0 362 27.1
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 3.4e-14 83.6 231 29.4
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 3.4e-14 83.6 341 25.5
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 3.4e-14 83.6 362 27.3
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 7.5e-14 82.4 333 29.4
Sopen04g031160 Solanum pennellii HOM05D006874 ORTHO05D008334 1.7e-13 81.3 261 27.6
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 2.9e-13 80.5 110 35.5
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 2.9e-13 80.5 366 28.1
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 7.1e-12 75.9 362 26.0
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.5e-11 73.6 106 36.8
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 1.3e-10 71.6 353 27.5
Gohir.D13G046200 Gossypium hirsutum HOM05D016697 ORTHO05D018163 1.2e-08 65.1 357 27.7
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.2e-08 65.1 174 36.8
Gohir.A13G047850 Gossypium hirsutum HOM05D016697 ORTHO05D018163 1.6e-08 64.7 357 26.6
Gorai.013G051900 Gossypium raimondii HOM05D016697 ORTHO05D018163 4.7e-08 63.2 357 26.9
VMungo1215G3202 Vigna mungo HOM05D023496 ORTHO05D025628 6.2e-08 62.8 369 26.3
SEGI_19816 Sequoiadendron giganteum HOM05D003485 ORTHO05D004004 2.3e-07 60.8 110 32.7
Gorai.002G136000 Gossypium raimondii HOM05D006874 ORTHO05D008334 8.9e-07 58.9 333 24.6
Lj2g0008576 Lotus japonicus HOM05D023496 ORTHO05D025628 1.5e-06 58.2 377 27.3
Phvul.002G050800 Phaseolus vulgaris HOM05D023496 ORTHO05D025628 1.5e-06 58.2 353 26.6
Gohir.A01G123500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 3.4e-06 57.0 335 25.1
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 5.8e-06 56.2 62 56.5


User provided reference genes

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