Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 7.5e-205 716.8 335 100.0
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.6e-186 656.0 332 90.7
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.0e-185 653.3 330 90.0
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.5e-184 649.4 330 89.4
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 4.3e-184 647.9 330 87.9
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 4.3e-184 647.9 330 88.5
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.8e-183 645.2 330 89.7
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 2.8e-183 645.2 330 87.9
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 6.2e-183 644.0 329 90.0
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 6.2e-183 644.0 327 89.6
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 8.1e-183 643.7 330 87.6
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.8e-182 642.5 328 88.7
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 3.1e-182 641.7 335 86.9
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 8.9e-182 640.2 330 87.9
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 8.9e-182 640.2 328 88.7
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 8.9e-182 640.2 330 87.0
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.2e-181 639.8 327 89.6
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 2.0e-181 639.0 330 88.2
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 2.6e-181 638.6 330 87.3
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.4e-181 638.3 337 86.9
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 4.4e-181 637.9 329 88.4
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 4.4e-181 637.9 327 88.1
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 4.4e-181 637.9 335 86.0
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 4.4e-181 637.9 334 88.0
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 5.8e-181 637.5 327 89.0
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 5.8e-181 637.5 328 88.7
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 9.9e-181 636.7 329 89.1
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 9.9e-181 636.7 327 88.1
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 9.9e-181 636.7 327 87.5
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 2.2e-180 635.6 328 88.4
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 3.8e-180 634.8 326 87.7
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 6.4e-180 634.0 330 87.3
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 1.4e-179 632.9 326 87.4
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.9e-179 632.5 326 86.8
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 3.5e-178 628.2 328 87.8
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 4.6e-178 627.9 327 87.2
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 4.6e-178 627.9 326 87.1
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.0e-177 626.7 349 83.7
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.6e-177 623.6 325 86.2
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 8.6e-177 623.6 320 89.7
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.1e-176 623.2 323 86.4
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.9e-176 622.5 320 89.4
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.9e-176 622.5 328 85.7
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 2.5e-176 622.1 329 86.3
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 2.5e-176 622.1 325 87.1
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 7.3e-176 620.5 320 88.8
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 7.3e-176 620.5 325 86.8
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.6e-175 619.4 325 85.5
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 1.6e-175 619.4 325 85.8
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.1e-175 619.0 323 87.0
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 2.1e-175 619.0 351 81.5
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.8e-175 618.6 325 85.5
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 3.6e-175 618.2 320 88.4
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.7e-175 617.8 323 86.1
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 8.1e-175 617.1 329 84.2
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 1.4e-174 616.3 333 85.9
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 5.2e-174 614.4 324 85.8
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 2.0e-173 612.5 317 86.8
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.6e-173 612.1 316 87.7
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 4.4e-173 611.3 315 87.0
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.3e-172 609.8 334 85.0
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 2.2e-172 609.0 328 84.5
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.4e-171 605.5 348 80.2
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.2e-171 605.1 324 83.6
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.6e-170 602.8 332 82.8
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.6e-170 602.8 312 86.2
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.3e-169 599.7 312 85.9
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 3.0e-169 598.6 314 86.3
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 5.1e-169 597.8 314 85.4
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 8.7e-169 597.0 312 85.6
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.9e-168 595.9 312 85.6
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 1.9e-168 595.9 312 85.6
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 4.3e-168 594.7 316 85.8
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 5.6e-168 594.3 320 84.7
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 8.1e-167 590.5 317 83.9
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.1e-166 590.1 314 85.4
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 2.4e-166 589.0 337 79.5
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 6.9e-166 587.4 315 85.7
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.5e-165 586.3 329 80.2
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 2.2e-164 582.4 343 78.1
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 4.2e-163 578.2 339 79.1
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 4.6e-162 574.7 333 82.0
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 6.0e-162 574.3 360 76.4
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 8.7e-161 570.5 321 78.8
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.1e-160 570.1 297 85.2
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 2.5e-160 568.9 344 75.9
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.4e-155 553.1 327 77.7
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 1.6e-154 549.7 293 82.3
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 5.1e-153 544.7 323 78.3
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.9e-147 526.2 315 76.8
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 2.1e-146 522.7 284 82.0
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.1e-143 512.7 311 73.6
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 3.7e-143 511.9 314 71.7
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.4e-142 510.0 318 69.8
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 2.4e-142 509.2 575 49.9
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.4e-142 509.2 319 71.8
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 5.7e-128 461.5 315 66.7
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.9e-123 446.4 245 83.3
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 6.1e-114 414.8 270 73.7
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 2.4e-110 402.9 200 89.5
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 1.4e-105 387.1 227 81.5
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 6.3e-103 378.3 278 65.1
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 3.8e-92 342.4 351 46.4
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 4.6e-85 318.9 347 44.1
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.1e-82 310.1 313 46.6
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 8.0e-82 308.1 314 47.1
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.1e-75 287.7 166 80.7
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.6e-64 250.0 167 71.3
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 4.3e-59 232.6 186 58.6
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.4e-57 226.9 126 77.8
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 9.9e-56 221.5 331 39.6
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 9.6e-51 204.9 204 53.4
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 8.1e-50 201.8 134 71.6
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 5.8e-48 195.7 196 46.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 1.9e-30 137.5 83 73.5
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 3.2e-22 110.2 57 84.2
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 5.3e-17 92.8 79 53.2
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 2.3e-12 77.4 39 79.5
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 3.9e-12 76.6 74 54.1
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.8e-10 69.7 34 82.4
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 3.8e-07 60.1 100 34.0
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 3.8e-07 60.1 147 25.9
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 5.0e-07 59.7 35 68.6
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 8.5e-07 58.9 68 47.1
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 8.5e-07 58.9 121 33.1
Glyma.13G182100 Glycine max HOM05D000363 ORTHO05D000236 4.2e-06 56.6 122 31.1
FAN13G1163 Fragaria x ananassa HOM05D000363 ORTHO05D000236 7.2e-06 55.8 100 37.0
FvH4_5g27600 Fragaria vesca HOM05D000363 ORTHO05D000236 9.4e-06 55.5 100 36.0
FAN18G0326 Fragaria x ananassa HOM05D000363 ORTHO05D000236 9.4e-06 55.5 100 37.0
FAN26G0454 Fragaria x ananassa HOM05D000363 ORTHO05D000236 9.4e-06 55.5 122 30.3


User provided reference genes

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