Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09467 Davidia involucrata HOM05D002709 ORTHO05D002914 1.7e-120 436.0 221 100.0
CSS0031913 Camellia sinensis var. sinensis HOM05D002709 ORTHO05D002914 1.4e-42 177.2 216 51.4
CiPaw.13G149800 Carya illinoinensis HOM05D002709 ORTHO05D002914 5.7e-36 155.2 238 46.6
Hma1.2p1_0420F.1_g149790 Hydrangea macrophylla HOM05D002709 ORTHO05D002914 1.6e-33 147.1 217 47.0
Actinidia05815 Actinidia chinensis HOM05D002709 ORTHO05D002914 1.0e-32 144.4 240 43.3
CiPaw.13G149600 Carya illinoinensis HOM05D002709 ORTHO05D002914 5.0e-32 142.1 230 44.3
Actinidia31749 Actinidia chinensis HOM05D002709 ORTHO05D002914 3.6e-30 136.0 218 44.0
Cc02_g26300 Coffea canephora HOM05D002709 ORTHO05D002914 1.2e-28 131.0 230 42.2
DCAR_029561 Daucus carota HOM05D002709 ORTHO05D002914 1.2e-28 131.0 211 43.6
CSS0035517 Camellia sinensis var. sinensis HOM05D002709 ORTHO05D002914 8.3e-27 124.8 203 45.8
Oeu060684.1 Olea europaea HOM05D002709 ORTHO05D002914 3.2e-26 122.9 217 45.6
Manes.07G013000 Manihot esculenta HOM05D002709 ORTHO05D002914 7.0e-26 121.7 210 44.8
CSS0026946 Camellia sinensis var. sinensis HOM05D002709 ORTHO05D002914 5.0e-24 115.5 203 44.3
Lj7A558T39 Lonicera japonica HOM05D002709 ORTHO05D002914 4.3e-23 112.5 191 42.4
Cfa003674 Carpinus fangiana HOM05D002709 ORTHO05D002914 6.2e-22 108.6 203 41.4
arahy.Tifrunner.gnm1.ann1.ALCT10 Arachis hypogaea HOM05D002709 ORTHO05D002914 1.8e-21 107.1 275 36.0
arahy.Tifrunner.gnm1.ann1.UPIP6Z Arachis hypogaea HOM05D002709 ORTHO05D002914 1.8e-21 107.1 275 36.0
Rhsim07G0044100 Rhododendron simsii HOM05D002709 ORTHO05D002914 4.4e-20 102.4 209 39.7
Medtr4g094762 Medicago truncatula HOM05D002709 ORTHO05D002914 7.5e-20 101.7 249 37.3
Haze_15815 Corylus avellana HOM05D002709 ORTHO05D002914 3.7e-19 99.4 214 37.4
Ca_18230_v3 Cicer arietinum L. HOM05D002709 ORTHO05D002914 6.4e-19 98.6 223 38.1
Lalb_Chr07g0188211 Lupinus albus HOM05D002709 ORTHO05D002914 8.3e-19 98.2 244 34.4
GSVIVG01011330001 Vitis vinifera HOM05D002709 ORTHO05D002914 8.3e-19 98.2 211 39.8
Aqoxy3G02033 Aquilegia oxysepala HOM05D002709 ORTHO05D002914 1.4e-18 97.4 284 34.2
TPR.G23841 Trifolium pratense HOM05D002709 ORTHO05D002914 1.4e-18 97.4 246 38.2
Glyma.05G134400 Glycine max HOM05D002709 ORTHO05D002914 1.9e-18 97.1 258 38.0
QL04p052179 Quercus lobata HOM05D002709 ORTHO05D002914 1.9e-18 97.1 208 37.5
MD02G1240500 Malus domestica HOM05D002709 ORTHO05D002914 1.6e-17 94.0 253 34.8
Nitab4.5_0000592g0300 Nicotiana tabacum HOM05D002709 ORTHO05D002914 1.6e-17 94.0 230 34.8
Glyma.08G089100 Glycine max HOM05D002709 ORTHO05D002914 2.1e-17 93.6 257 36.2
VMungo0251G0109 Vigna mungo HOM05D002709 ORTHO05D002914 2.7e-17 93.2 258 36.0
Lj4g0018416 Lotus japonicus HOM05D002709 ORTHO05D002914 3.5e-17 92.8 224 37.5
Haze_15816 Corylus avellana HOM05D002709 ORTHO05D002914 6.0e-17 92.0 201 35.8
MD02G1240400 Malus domestica HOM05D002709 ORTHO05D002914 1.0e-16 91.3 180 40.0
Atru.chr6.2608 Acer truncatum HOM05D002709 ORTHO05D002914 1.7e-16 90.5 242 34.7
Lj4g0001908 Lotus japonicus HOM05D002709 ORTHO05D002914 2.3e-16 90.1 221 36.2
MD07G1076400 Malus domestica HOM05D002709 ORTHO05D002914 3.9e-16 89.4 186 37.1
Prupe.2G097200 Prunus persica HOM05D002709 ORTHO05D002914 5.1e-16 89.0 178 42.1
Peaxi162Scf00592g00446 Petunia axillaris HOM05D002709 ORTHO05D002914 6.6e-16 88.6 237 36.7
Nn1g02001 Nelumbo nucifera HOM05D002709 ORTHO05D002914 1.1e-15 87.8 264 33.3
Manes.10G132400 Manihot esculenta HOM05D002709 ORTHO05D002914 3.3e-15 86.3 197 36.0
SalBow4G0249 Salvia bowleyana HOM05D002709 ORTHO05D002914 9.5e-15 84.7 185 41.6
SalBow4G1996 Salvia bowleyana HOM05D002709 ORTHO05D002914 9.5e-15 84.7 185 41.6
Lj7A558T38 Lonicera japonica HOM05D002709 ORTHO05D002914 2.1e-14 83.6 167 38.9
CAN.G700.27 Capsicum annuum HOM05D002709 ORTHO05D002914 8.1e-14 81.6 234 34.6
Psat7g087680 Pisum sativum HOM05D002709 ORTHO05D002914 8.1e-14 81.6 224 36.6
Duzib128G1731 Durio zibethinus HOM05D002709 ORTHO05D002914 1.8e-13 80.5 203 34.0
Medtr4g094758 Medicago truncatula HOM05D002709 ORTHO05D002914 1.8e-13 80.5 230 35.2
Phvul.002G187950 Phaseolus vulgaris HOM05D002709 ORTHO05D002914 6.8e-13 78.6 203 36.0
vmacro13577 Vaccinium macrocarpon HOM05D002709 ORTHO05D002914 6.8e-13 78.6 209 35.4
Migut.N01686 Erythranthe guttata HOM05D002709 ORTHO05D002914 8.9e-13 78.2 172 36.0
PGSC0003DMG400001791 Solanum tuberosum HOM05D002709 ORTHO05D002914 1.2e-12 77.8 220 32.3
Atru.chr12.829 Acer truncatum HOM05D002709 ORTHO05D002914 7.6e-12 75.1 98 53.1
Oeu060686.1 Olea europaea HOM05D002709 ORTHO05D002914 7.6e-12 75.1 121 48.8
Migut.N01685 Erythranthe guttata HOM05D002709 ORTHO05D002914 1.7e-11 73.9 153 40.5
MBI04_g21140_MAGBIO Magnolia biondii HOM05D002709 ORTHO05D002914 1.7e-11 73.9 172 37.2
Sed0026777 Sechium edule HOM05D002709 ORTHO05D002914 4.9e-11 72.4 221 29.4
CANSAT25G2627 Cannabis sativa HOM05D002709 ORTHO05D002914 6.4e-11 72.0 141 37.6
CsaV3_2G011050 Cucumis sativus L. HOM05D002709 ORTHO05D002914 8.4e-11 71.6 231 32.0
Gohir.D06G164500 Gossypium hirsutum HOM05D002709 ORTHO05D002914 8.4e-11 71.6 209 34.4
Thecc.10G002900 Theobroma cacao HOM05D002709 ORTHO05D002914 1.1e-10 71.2 202 36.6
COL.COLO4_19335 Corchorus olitorius HOM05D002709 ORTHO05D002914 1.9e-10 70.5 116 44.0
Gohir.A06G158500 Gossypium hirsutum HOM05D002709 ORTHO05D002914 1.9e-10 70.5 210 34.3
AL4G26440 Arabidopsis lyrata HOM05D002709 ORTHO05D002914 3.2e-10 69.7 208 31.2
Sopen01g032710 Solanum pennellii HOM05D002709 ORTHO05D002914 3.2e-10 69.7 219 35.6
Gorai.010G191900 Gossypium raimondii HOM05D002709 ORTHO05D002914 4.1e-10 69.3 209 34.4
Nitab4.5_0004594g0050 Nicotiana tabacum HOM05D002709 ORTHO05D002914 5.4e-10 68.9 119 45.4
FvH4_7g07050 Fragaria vesca HOM05D002709 ORTHO05D002914 9.2e-10 68.2 231 34.6
FAN06G4435 Fragaria x ananassa HOM05D002709 ORTHO05D002914 9.2e-10 68.2 231 34.6
Gohir.D04G071900 Gossypium hirsutum HOM05D002709 ORTHO05D002914 1.2e-09 67.8 94 51.1
Phvul.003G281300 Phaseolus vulgaris HOM05D002709 ORTHO05D002914 1.2e-09 67.8 230 31.7
VMungo0251G2843 Vigna mungo HOM05D002709 ORTHO05D002914 2.1e-09 67.0 202 33.7
Aa31LG5G5710 Aethionema arabicum HOM05D002709 ORTHO05D002914 2.7e-09 66.6 206 32.5
Gohir.D06G164400 Gossypium hirsutum HOM05D002709 ORTHO05D002914 2.7e-09 66.6 207 32.4
BcaB03g15789 Brassica carinata HOM05D002709 ORTHO05D002914 3.5e-09 66.2 194 34.5
FAN03G0863 Fragaria x ananassa HOM05D002709 ORTHO05D002914 3.5e-09 66.2 231 34.2
Gohir.A06G158600 Gossypium hirsutum HOM05D002709 ORTHO05D002914 3.5e-09 66.2 210 33.3
Gorai.012G081100 Gossypium raimondii HOM05D002709 ORTHO05D002914 3.5e-09 66.2 212 31.1
Thhalv10016616m.g Eutrema salsugineum HOM05D002709 ORTHO05D002914 6.0e-09 65.5 207 30.4
Gorai.010G191800 Gossypium raimondii HOM05D002709 ORTHO05D002914 6.0e-09 65.5 209 32.1
Sed0003196 Sechium edule HOM05D002709 ORTHO05D002914 6.0e-09 65.5 173 33.5
ClCG06G008120 Citrullus lanatus HOM05D002709 ORTHO05D002914 7.8e-09 65.1 94 45.7
DCAR_025008 Daucus carota HOM05D002709 ORTHO05D002914 1.3e-08 64.3 145 36.6
FAN10G3660 Fragaria x ananassa HOM05D002709 ORTHO05D002914 1.3e-08 64.3 231 33.3
RcHm_v2.0_Chr1g0337011 Rosa chinensis HOM05D002709 ORTHO05D002914 1.3e-08 64.3 218 34.4
Atru.chr8.7 Acer truncatum HOM05D002709 ORTHO05D002914 1.7e-08 63.9 147 32.0
BraA04t17925Z Brassica rapa HOM05D002709 ORTHO05D002914 2.3e-08 63.5 192 33.9
A04p24050 Brassica napus HOM05D002709 ORTHO05D002914 3.0e-08 63.2 195 32.3
Sp4g13710 Schrenkiella parvula HOM05D002709 ORTHO05D002914 5.1e-08 62.4 199 31.7
Ciclev10019669m.g Citrus clementina HOM05D002709 ORTHO05D002914 6.6e-08 62.0 214 29.0
C04p60730 Brassica napus HOM05D002709 ORTHO05D002914 8.6e-08 61.6 194 33.5
Carub.0004s1250 Capsella rubella HOM05D002709 ORTHO05D002914 1.1e-07 61.2 201 30.3
Rhsim01G0134800 Rhododendron simsii HOM05D002709 ORTHO05D002914 1.1e-07 61.2 192 30.7
Nitab4.5_0004412g0070 Nicotiana tabacum HOM05D002709 ORTHO05D002914 1.5e-07 60.8 97 49.5
BcaB06g28432 Brassica carinata HOM05D002709 ORTHO05D002914 1.9e-07 60.5 187 31.6
Lalb_Chr09g0334541 Lupinus albus HOM05D002709 ORTHO05D002914 1.9e-07 60.5 225 30.7
BcaB06g28431 Brassica carinata HOM05D002709 ORTHO05D002914 2.5e-07 60.1 194 33.0
BcaB06g28516 Brassica carinata HOM05D002709 ORTHO05D002914 3.3e-07 59.7 197 31.0
FAN01G2882 Fragaria x ananassa HOM05D002709 ORTHO05D002914 4.3e-07 59.3 122 39.3
Sabra06G0155400 Salix brachista HOM05D002709 ORTHO05D002914 4.3e-07 59.3 222 34.2
BolC4t27562H Brassica oleracea HOM05D002709 ORTHO05D002914 7.3e-07 58.5 194 30.9
AT2G31220 Arabidopsis thaliana HOM05D002709 ORTHO05D002914 1.2e-06 57.8 200 31.5
Lalb_Chr12g0209171 Lupinus albus HOM05D002709 ORTHO05D002914 1.6e-06 57.4 123 38.2
BolC4t23450H Brassica oleracea HOM05D002709 ORTHO05D002914 4.7e-06 55.8 193 30.1
THA.LOC104800872 Tarenaya hassleriana HOM05D002709 ORTHO05D002914 4.7e-06 55.8 238 28.6
BcaB02g10374 Brassica carinata HOM05D002709 ORTHO05D002914 8.1e-06 55.1 196 27.6
BcaC02g11211 Brassica carinata HOM05D002709 ORTHO05D002914 8.1e-06 55.1 193 30.1
C04p19170 Brassica napus HOM05D002709 ORTHO05D002914 8.1e-06 55.1 193 30.1
FvH4_7g02380 Fragaria vesca HOM05D002709 ORTHO05D002914 8.1e-06 55.1 122 37.7
HanXRQChr11g0344001 Helianthus annuus HOM05D002709 ORTHO05D002914 8.1e-06 55.1 160 31.9


User provided reference genes

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