Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 8.3e-259 896.7 528 100.0
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 6.0e-116 422.2 386 73.6
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 4.5e-111 406.0 411 69.8
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 1.5e-98 364.4 391 57.0
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 1.9e-98 364.0 440 47.3
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 2.5e-98 363.6 348 73.9
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 4.3e-98 362.8 388 63.7
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 1.3e-94 351.3 391 47.6
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 4.2e-93 346.3 381 68.0
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 4.2e-93 346.3 381 68.0
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 1.0e-91 341.7 435 57.9
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 4.7e-84 316.2 424 59.7
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 1.8e-83 314.3 378 56.3
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 3.9e-83 313.2 401 58.4
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 2.9e-78 297.0 433 55.9
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 2.9e-78 297.0 367 49.6
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 2.9e-78 297.0 374 60.2
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 3.8e-78 296.6 394 54.3
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 1.1e-77 295.0 375 58.9
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 1.1e-77 295.0 427 53.2
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 2.5e-77 293.9 417 46.8
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 9.4e-77 292.0 375 62.7
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 1.6e-76 291.2 394 48.7
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 6.1e-76 289.3 381 40.9
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 3.9e-75 286.6 440 53.2
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 1.1e-74 285.0 381 56.2
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 3.3e-74 283.5 422 51.7
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 3.7e-73 280.0 400 42.0
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 4.1e-72 276.6 437 53.1
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 7.0e-72 275.8 400 47.8
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 7.7e-71 272.3 443 51.9
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 2.2e-70 270.8 418 55.3
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 3.8e-70 270.0 404 52.7
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 3.8e-70 270.0 381 58.3
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 6.5e-70 269.2 418 55.0
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 4.2e-69 266.5 431 47.3
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 1.2e-68 265.0 391 54.5
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 1.6e-68 264.6 431 47.8
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 2.1e-68 264.2 407 56.8
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 8.0e-68 262.3 345 55.7
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 2.3e-67 260.8 428 47.0
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 5.2e-67 259.6 382 53.4
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 1.5e-66 258.1 417 53.5
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 4.4e-66 256.5 421 52.7
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 9.7e-66 255.4 431 52.4
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 1.7e-65 254.6 374 52.9
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 5.3e-64 249.6 419 51.1
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 2.7e-63 247.3 422 45.3
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 7.7e-63 245.7 376 52.9
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 8.5e-62 242.3 382 39.3
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 3.6e-60 236.9 369 49.3
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 1.2e-58 231.9 352 51.7
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 2.6e-58 230.7 331 41.7
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 1.2e-55 221.9 368 54.6
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 1.2e-55 221.9 367 51.2
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 2.0e-55 221.1 367 50.4
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 2.9e-54 217.2 374 48.9
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 6.6e-54 216.1 374 49.7
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 5.5e-53 213.0 335 50.7
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 9.5e-53 212.2 370 53.5
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 4.0e-51 206.8 280 60.7
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 2.6e-50 204.1 375 48.5
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 9.2e-48 195.7 373 50.7
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 1.7e-46 191.4 289 57.8
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 6.6e-46 189.5 283 60.4
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 4.7e-44 183.3 292 61.0
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 1.4e-43 181.8 370 48.9
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 5.8e-42 176.4 391 30.9
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 5.8e-42 176.4 391 30.9
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 8.3e-41 172.6 376 32.7
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 3.2e-40 170.6 273 37.0
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 3.2e-40 170.6 378 31.2
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 6.2e-36 156.4 290 54.1
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 2.3e-35 154.5 391 30.2
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 9.8e-34 149.1 257 56.4
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 3.5e-31 140.6 299 31.8
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 7.8e-31 139.4 363 27.3
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 1.0e-30 139.0 366 46.7
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 2.5e-21 107.8 248 55.2
SEGI_26452 Sequoiadendron giganteum HOM05D007884 ORTHO05D009968 5.2e-19 100.1 433 37.4
Hund17562 Selenicereus undatus HOM05D007884 ORTHO05D009968 2.4e-08 64.7 54 51.9
Peaxi162Scf00078g00351 Petunia axillaris HOM05D006237 ORTHO05D002967 7.1e-08 63.2 57 47.4


User provided reference genes

Program Settings