Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 5.8e-219 763.8 366 100.0
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 1.2e-192 676.4 366 87.4
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 1.0e-191 673.3 366 88.3
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 3.0e-191 671.8 388 83.2
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 8.8e-191 670.2 363 88.2
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 1.1e-188 663.3 363 87.1
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 9.1e-188 660.2 362 85.9
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 1.6e-187 659.4 368 85.9
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 2.2e-186 655.6 362 85.6
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 5.0e-186 654.4 362 85.9
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 1.9e-185 652.5 364 85.2
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 4.2e-185 651.4 366 85.5
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 9.4e-185 650.2 363 84.8
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 1.6e-184 649.4 362 84.5
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 1.0e-183 646.7 366 84.4
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 1.4e-183 646.4 363 85.4
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 2.3e-183 645.6 363 84.0
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 5.2e-183 644.4 366 85.8
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 1.5e-182 642.9 366 84.4
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 2.0e-182 642.5 363 85.4
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 3.4e-182 641.7 362 83.7
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 9.8e-182 640.2 363 84.3
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 1.3e-181 639.8 363 83.7
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 2.2e-181 639.0 361 83.9
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 3.7e-181 638.3 363 84.8
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 8.3e-181 637.1 363 84.0
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 2.4e-180 635.6 364 83.2
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 3.1e-180 635.2 361 84.8
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 4.1e-180 634.8 362 82.3
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 9.1e-180 633.6 362 82.9
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 3.5e-179 631.7 363 82.4
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 4.5e-179 631.3 364 83.0
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 4.5e-179 631.3 364 82.4
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 4.5e-179 631.3 359 83.3
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 4.5e-179 631.3 365 83.8
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 7.7e-179 630.6 363 83.5
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 2.2e-178 629.0 363 82.4
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 3.8e-178 628.2 363 82.4
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 6.5e-178 627.5 363 82.4
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 8.5e-178 627.1 363 82.1
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 8.5e-178 627.1 363 82.4
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 5.5e-177 624.4 363 81.5
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 7.2e-177 624.0 364 81.9
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 9.4e-177 623.6 362 80.9
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 1.6e-176 622.9 362 82.3
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 2.1e-176 622.5 366 81.1
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 6.1e-176 620.9 364 79.9
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 1.0e-175 620.2 362 82.6
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 1.0e-175 620.2 363 82.1
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 6.8e-175 617.5 363 81.5
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.2e-174 616.7 364 79.7
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 1.5e-174 616.3 371 80.9
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 1.5e-174 616.3 363 81.0
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.5e-174 616.3 364 79.4
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.5e-174 616.3 364 79.4
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 2.0e-174 615.9 363 80.4
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 2.6e-174 615.5 363 79.9
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 4.4e-174 614.8 362 81.5
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 4.4e-174 614.8 364 79.4
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 5.7e-174 614.4 363 80.2
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 9.8e-174 613.6 363 80.7
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 9.8e-174 613.6 360 80.8
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 9.8e-174 613.6 362 81.2
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 9.8e-174 613.6 361 80.9
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 1.3e-173 613.2 362 79.0
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 1.4e-172 609.8 362 80.1
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 2.4e-172 609.0 363 79.1
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 4.1e-172 608.2 359 80.8
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 5.4e-172 607.8 365 77.0
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 5.4e-172 607.8 362 79.6
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 5.4e-172 607.8 362 80.7
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 3.5e-171 605.1 362 79.0
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 3.5e-171 605.1 417 73.6
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 1.0e-170 603.6 361 79.5
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 1.7e-170 602.8 367 78.2
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 3.8e-170 601.7 392 74.5
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 1.1e-169 600.1 360 79.7
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 1.9e-169 599.4 360 78.3
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 1.6e-168 596.3 362 77.3
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 2.1e-168 595.9 362 78.2
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 4.7e-168 594.7 363 78.5
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 6.1e-168 594.3 357 79.3
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 6.1e-168 594.3 437 69.3
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 8.0e-168 594.0 362 79.3
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 8.0e-168 594.0 362 79.3
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 4.0e-167 591.7 363 77.7
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 6.8e-167 590.9 362 78.5
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 6.8e-167 590.9 363 78.5
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 8.9e-167 590.5 455 65.9
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 2.0e-166 589.3 362 77.3
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 3.4e-166 588.6 363 76.6
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 3.4e-166 588.6 360 76.7
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 2.9e-165 585.5 362 78.2
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 1.1e-164 583.6 362 78.2
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 7.0e-164 580.9 363 76.0
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 1.7e-162 576.2 363 74.7
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 2.3e-162 575.9 456 62.1
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 4.4e-158 561.6 360 72.8
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 3.7e-157 558.5 335 79.7
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 8.3e-157 557.4 364 72.0
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 7.0e-156 554.3 371 70.1
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 1.6e-155 553.1 362 71.3
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 2.0e-155 552.7 364 71.4
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 3.5e-155 552.0 361 72.3
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 2.3e-154 549.3 360 70.0
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 6.6e-154 547.7 356 73.0
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 6.2e-152 541.2 362 68.0
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 5.8e-150 534.6 388 70.6
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 1.9e-148 529.6 360 68.3
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 1.9e-145 519.6 364 66.8
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 6.2e-144 514.6 273 89.7
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 4.9e-141 505.0 519 52.4
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 2.4e-140 502.7 364 64.6
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 6.6e-138 494.6 359 62.4
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 2.6e-134 482.6 270 83.7
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 3.2e-132 475.7 254 88.2
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 1.5e-126 456.8 348 68.1
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 3.2e-124 449.1 386 57.0
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 2.9e-117 426.0 280 73.2
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 7.9e-115 417.9 350 59.7
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 2.5e-105 386.3 351 52.7
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 3.8e-101 372.5 302 60.6
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 1.4e-100 370.5 350 52.6
Solyc10g037950.2 Solanum lycopersicum HOM05D005285 ORTHO05D006829 1.0e-90 337.8 203 80.8
HanXRQChr11g0330591 Helianthus annuus HOM05D005285 ORTHO05D006829 1.8e-90 337.0 228 71.5
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 7.7e-86 321.6 271 60.9
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 4.4e-81 305.8 162 87.7
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.7e-80 303.9 179 79.9
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 8.2e-80 301.6 164 84.1
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 8.5e-77 291.6 179 74.9
TPR.G21746 Trifolium pratense HOM05D005285 ORTHO05D006829 7.0e-71 271.9 186 69.4
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 2.0e-65 253.8 353 41.6
Cpa.g.sc2760.1 Carica papaya HOM05D005285 ORTHO05D006829 2.5e-60 236.9 178 62.4
Rhsim06G0016300 Rhododendron simsii HOM05D005285 ORTHO05D006829 4.9e-56 222.6 118 90.7
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 7.3e-52 208.8 170 62.9
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 3.9e-45 186.4 106 79.2
Actinidia21565 Actinidia chinensis HOM05D005285 ORTHO05D006829 3.7e-40 169.9 107 77.6
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 3.2e-39 166.8 90 87.8
Oeu039101.1 Olea europaea HOM05D000288 ORTHO05D000173 6.4e-32 142.5 91 76.9
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 6.2e-27 125.9 199 39.7
vmacro21176 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 1.9e-20 104.4 112 53.6
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 4.3e-20 103.2 232 30.2
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 2.1e-19 100.9 62 72.6
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 3.6e-19 100.1 77 61.0
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 5.2e-18 96.3 55 76.4
VMungo1127G1344 Vigna mungo HOM05D000839 ORTHO05D000664 7.6e-17 92.4 48 85.4
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 2.4e-15 87.4 83 55.4
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 4.6e-14 83.2 47 76.6
TPR.G1074 Trifolium pratense HOM05D005285 ORTHO05D411165 2.0e-09 67.8 74 47.3
arahy.Tifrunner.gnm1.ann1.81AB3J Arachis hypogaea HOM05D000001 ORTHO05D084391 1.2e-06 58.5 43 55.8
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 2.7e-06 57.4 32 81.2


User provided reference genes

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