Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 1.1e-128 463.4 246 100.0
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 3.9e-102 375.2 247 76.9
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 5.7e-101 371.3 245 82.0
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 3.7e-100 368.6 246 82.1
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 4.8e-100 368.2 246 80.1
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 5.3e-99 364.8 247 81.0
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 2.0e-98 362.8 247 74.1
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 6.5e-97 357.8 249 78.3
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 5.5e-96 354.8 244 77.5
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 9.4e-96 354.0 246 80.1
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 1.8e-94 349.7 255 76.9
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 1.8e-94 349.7 246 71.5
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 1.8e-94 349.7 277 71.5
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 6.7e-94 347.8 246 78.0
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 6.7e-94 347.8 247 79.4
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 1.1e-93 347.1 247 78.9
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 4.4e-93 345.1 246 78.0
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 5.7e-93 344.7 249 75.5
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 9.7e-93 344.0 247 76.9
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 1.7e-92 343.2 247 77.3
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 2.8e-92 342.4 246 76.4
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.7e-92 342.0 250 77.6
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 6.3e-92 341.3 251 76.9
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 6.3e-92 341.3 245 70.6
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 1.4e-91 340.1 300 67.3
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 5.3e-91 338.2 246 76.0
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 9.1e-91 337.4 250 76.4
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 2.6e-90 335.9 279 62.7
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 3.5e-90 335.5 264 67.8
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 4.5e-90 335.1 249 76.3
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 1.7e-89 333.2 311 62.4
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 5.0e-89 331.6 316 58.5
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 5.0e-89 331.6 179 89.9
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 1.5e-88 330.1 279 62.4
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 1.5e-88 330.1 208 76.9
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 2.5e-88 329.3 208 77.4
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 3.2e-88 328.9 207 77.3
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 9.4e-88 327.4 178 88.8
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.2e-87 327.0 307 58.6
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 1.2e-87 327.0 248 71.4
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.2e-87 327.0 184 85.3
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 1.6e-87 326.6 226 71.7
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 2.1e-87 326.2 234 71.4
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 2.7e-87 325.9 180 86.7
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 4.7e-87 325.1 275 66.5
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 6.1e-87 324.7 178 88.2
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.8e-86 323.2 249 74.3
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 2.3e-86 322.8 180 86.1
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.0e-86 322.0 250 70.8
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 5.2e-86 321.6 275 68.7
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 1.1e-85 320.5 245 71.8
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 2.0e-85 319.7 248 72.6
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 2.6e-85 319.3 243 74.5
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 2.6e-85 319.3 180 85.6
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 4.4e-85 318.5 245 71.4
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 7.5e-85 317.8 275 65.1
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 7.5e-85 317.8 247 73.7
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 9.7e-85 317.4 320 53.8
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 1.3e-84 317.0 245 71.0
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 4.8e-84 315.1 245 71.4
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 4.8e-84 315.1 313 60.7
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 8.2e-84 314.3 246 69.9
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 8.2e-84 314.3 245 71.0
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 3.1e-83 312.4 168 87.5
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 7.0e-83 311.2 255 69.4
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.6e-82 310.1 302 57.3
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 1.7e-81 306.6 269 60.2
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 2.2e-81 306.2 245 69.0
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 2.9e-81 305.8 249 68.7
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 3.8e-81 305.4 245 66.9
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 3.8e-81 305.4 245 68.6
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 4.2e-80 302.0 256 62.5
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 2.7e-79 299.3 273 60.8
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 2.7e-79 299.3 246 61.8
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 2.7e-79 299.3 263 65.8
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 2.3e-78 296.2 275 63.3
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 1.3e-76 290.4 249 66.3
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.7e-76 288.9 168 83.3
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.8e-76 288.5 170 82.4
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.2e-74 283.9 306 55.6
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 9.4e-72 274.2 212 66.5
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 2.1e-71 273.1 248 67.7
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 1.8e-70 270.0 145 87.6
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 4.0e-70 268.9 150 85.3
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 8.8e-70 267.7 169 74.0
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.5e-69 266.9 151 82.1
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 2.6e-69 266.2 146 85.6
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 2.8e-68 262.7 252 56.0
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 1.1e-67 260.8 243 63.8
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 2.4e-67 259.6 180 67.8
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 1.2e-66 257.3 234 60.3
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.9e-66 255.0 281 60.9
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 5.6e-64 248.4 256 64.1
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 1.8e-62 243.4 188 63.3
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 2.3e-62 243.0 184 62.5
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 2.3e-62 243.0 266 51.9
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 4.9e-60 235.3 398 39.9
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 5.4e-59 231.9 169 79.3
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 3.5e-58 229.2 125 87.2
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 1.9e-56 223.4 370 38.9
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 3.1e-54 216.1 154 71.4
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 8.3e-52 208.0 131 75.6
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 1.2e-50 204.1 187 54.5
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 1.2e-47 194.1 115 81.7
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 4.3e-40 169.1 118 66.9
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 9.5e-40 167.9 98 80.6
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 2.6e-37 159.8 113 67.3
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 1.9e-35 153.7 145 58.6
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 1.4e-30 137.5 81 80.2
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 1.9e-27 127.1 165 56.4
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 2.3e-25 120.2 146 58.9
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 2.2e-20 103.6 151 53.0
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 5.4e-19 99.0 122 57.4
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 3.5e-10 69.7 102 42.2
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 2.5e-08 63.5 39 74.4
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 4.3e-08 62.8 34 85.3
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 2.1e-07 60.5 29 93.1
DCAR_017073 Daucus carota HOM05D006852 ORTHO05D008585 1.1e-06 58.2 84 42.9


User provided reference genes

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