Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 1.8e-41 172.2 89 100.0
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 1.8e-41 172.2 89 100.0
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 8.0e-37 156.8 89 89.9
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.5e-35 152.5 89 87.6
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 2.2e-34 148.7 89 85.4
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 3.7e-34 147.9 86 87.2
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.4e-33 146.0 89 83.1
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 1.2e-32 142.9 89 80.9
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 1.0e-31 139.8 89 80.9
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 1.0e-31 139.8 89 78.7
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 2.9e-31 138.3 89 77.5
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 6.5e-31 137.1 89 77.5
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 8.5e-31 136.7 85 82.4
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.1e-30 136.3 89 78.7
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 1.5e-30 136.0 81 82.7
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 1.9e-30 135.6 86 79.1
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 1.9e-30 135.6 89 75.3
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 1.9e-30 135.6 89 75.3
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 1.9e-30 135.6 89 75.3
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 2.5e-30 135.2 88 80.7
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 2.5e-30 135.2 89 77.5
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 2.5e-30 135.2 89 78.7
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 5.5e-30 134.0 86 76.7
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 7.2e-30 133.7 89 76.4
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 7.2e-30 133.7 88 77.3
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 7.2e-30 133.7 89 78.7
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 7.2e-30 133.7 86 75.6
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 7.2e-30 133.7 88 76.1
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.2e-29 132.9 89 77.5
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.2e-29 132.9 89 78.7
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 1.6e-29 132.5 84 77.4
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 1.6e-29 132.5 84 77.4
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.6e-29 132.5 88 76.1
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 3.6e-29 131.3 89 75.3
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 3.6e-29 131.3 88 77.3
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 4.7e-29 131.0 89 75.3
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 4.7e-29 131.0 83 77.1
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 4.7e-29 131.0 89 75.3
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 4.7e-29 131.0 89 75.3
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 6.1e-29 130.6 85 78.8
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 6.1e-29 130.6 86 77.9
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 8.0e-29 130.2 81 81.5
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.0e-28 129.8 86 76.7
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 75.3
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 1.4e-28 129.4 88 76.1
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 76.4
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 1.8e-28 129.0 89 75.3
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 1.8e-28 129.0 82 75.6
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 2.3e-28 128.6 88 75.0
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 3.0e-28 128.3 89 73.0
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 3.0e-28 128.3 86 74.4
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 4.0e-28 127.9 84 75.0
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 5.2e-28 127.5 89 75.3
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 8.8e-28 126.7 89 73.0
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 2.6e-27 125.2 102 66.7
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 3.3e-27 124.8 88 76.1
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 5.7e-27 124.0 88 73.9
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 7.5e-27 123.6 86 72.1
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 1.3e-26 122.9 90 73.3
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 1.7e-26 122.5 88 71.6
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 1.7e-26 122.5 88 72.7
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 2.8e-26 121.7 86 72.1
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 3.7e-26 121.3 89 69.7
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 1.1e-25 119.8 89 73.0
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 3.1e-25 118.2 89 69.7
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 3.1e-25 118.2 89 76.4
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 5.3e-25 117.5 82 70.7
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 5.3e-25 117.5 82 72.0
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 5.3e-25 117.5 88 68.2
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 9.1e-25 116.7 95 69.5
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 1.2e-24 116.3 123 54.5
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 1.2e-24 116.3 124 55.6
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 1.6e-24 115.9 81 70.4
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.6e-24 115.9 95 69.5
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 2.7e-24 115.2 82 68.3
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 2.7e-24 115.2 82 68.3
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 2.7e-24 115.2 82 68.3
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 4.5e-24 114.4 155 48.4
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 4.5e-24 114.4 155 48.4
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.5e-24 114.4 82 70.7
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 4.5e-24 114.4 81 72.8
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 4.5e-24 114.4 83 67.5
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 1.0e-23 113.2 88 68.2
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.0e-23 113.2 82 68.3
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.0e-23 113.2 82 67.1
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.0e-23 113.2 82 67.1
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.0e-23 113.2 115 58.3
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 1.7e-23 112.5 82 68.3
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 3.8e-23 111.3 91 64.8
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 3.8e-23 111.3 91 64.8
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 5.0e-23 110.9 91 64.8
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 6.5e-23 110.5 83 72.3
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 1.5e-22 109.4 83 73.5
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.2e-21 106.3 82 63.4
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 1.2e-21 106.3 82 65.9
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 2.1e-21 105.5 82 63.4
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 6.1e-21 104.0 71 74.6
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 1.1e-17 93.2 197 35.0
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.7e-16 88.6 48 91.7
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 1.0e-15 86.7 59 69.5
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 3.3e-14 81.6 58 70.7
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 4.2e-14 81.3 48 85.4
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 4.2e-14 81.3 66 59.1
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 9.5e-14 80.1 49 81.6
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 1.2e-13 79.7 48 79.2
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.6e-13 79.3 78 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 1.0e-12 76.6 89 53.9
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 1.5e-11 72.8 85 50.6
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 4.4e-11 71.2 42 83.3
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 5.7e-11 70.9 48 70.8
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 1.4e-09 66.2 54 70.4


User provided reference genes

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