Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09265 Davidia involucrata HOM05D004673 ORTHO05D005596 6.4e-87 324.3 199 100.0
Dinv00554 Davidia involucrata HOM05D004673 ORTHO05D005596 4.0e-20 102.4 140 45.0
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 1.0e-15 87.8 140 47.9
Carub.0003s0318 Capsella rubella HOM05D004673 ORTHO05D005596 8.6e-15 84.7 209 46.9
AL6G47840 Arabidopsis lyrata HOM05D004673 ORTHO05D005596 1.6e-13 80.5 218 40.4
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 1.4e-12 77.4 160 36.2
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 1.4e-12 77.4 160 39.4
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 5.2e-12 75.5 138 37.0
BcaC01g04387 Brassica carinata HOM05D004673 ORTHO05D005596 8.9e-12 74.7 113 49.6
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 8.9e-12 74.7 160 37.5
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 8.9e-12 74.7 160 38.8
Carub.0006s3213 Capsella rubella HOM05D004673 ORTHO05D005596 1.2e-11 74.3 215 40.5
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 1.5e-11 73.9 185 31.4
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 1.5e-11 73.9 162 39.5
Thecc.05G294400 Theobroma cacao HOM05D004673 ORTHO05D005596 1.5e-11 73.9 162 36.4
COL.COLO4_13599 Corchorus olitorius HOM05D004673 ORTHO05D005596 2.0e-11 73.6 161 37.9
Aa31LG5G14520 Aethionema arabicum HOM05D004673 ORTHO05D005596 2.6e-11 73.2 160 37.5
Thhalv10027707m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 2.6e-11 73.2 212 40.6
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 3.4e-11 72.8 209 31.1
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 4.4e-11 72.4 135 41.5
C09p23810 Brassica napus HOM05D004673 ORTHO05D005596 5.8e-11 72.0 116 54.3
BolC9t55304H Brassica oleracea HOM05D004673 ORTHO05D005596 5.8e-11 72.0 116 54.3
CARHR078050 Cardamine hirsuta HOM05D004673 ORTHO05D005596 5.8e-11 72.0 138 40.6
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 7.5e-11 71.6 138 37.0
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 9.8e-11 71.2 138 33.3
BcaB04g19351 Brassica carinata HOM05D004673 ORTHO05D005596 1.3e-10 70.9 138 40.6
C03p40670 Brassica napus HOM05D004673 ORTHO05D005596 1.3e-10 70.9 138 40.6
BolC3t16332H Brassica oleracea HOM05D004673 ORTHO05D005596 1.3e-10 70.9 138 40.6
DCAR_030979 Daucus carota HOM05D004673 ORTHO05D005596 1.3e-10 70.9 209 32.1
Sabra01G0002300 Salix brachista HOM05D004673 ORTHO05D005596 2.2e-10 70.1 182 28.6
EL10Ac3g06819 Beta vulgaris HOM05D004673 ORTHO05D005596 2.9e-10 69.7 205 39.5
BraA03t12522Z Brassica rapa HOM05D004673 ORTHO05D005596 2.9e-10 69.7 138 39.9
Gohir.A11G259500 Gossypium hirsutum HOM05D004673 ORTHO05D005596 2.9e-10 69.7 138 39.9
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 3.7e-10 69.3 137 33.6
QL08p003638 Quercus lobata HOM05D004673 ORTHO05D005596 3.7e-10 69.3 142 41.5
A03p33470 Brassica napus HOM05D004673 ORTHO05D005596 4.9e-10 68.9 138 39.9
CARHR253220 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.9e-10 68.9 141 37.6
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 4.9e-10 68.9 164 37.8
QL08p003602 Quercus lobata HOM05D004673 ORTHO05D005596 6.4e-10 68.6 142 40.8
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 1.4e-09 67.4 137 35.8
CSS0005892 Camellia sinensis var. sinensis HOM05D004673 ORTHO05D005596 1.9e-09 67.0 200 29.0
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 1.9e-09 67.0 159 32.7
Sp3g02900 Schrenkiella parvula HOM05D004673 ORTHO05D005596 1.9e-09 67.0 138 34.1
CARHR253290 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.4e-09 66.6 152 37.5
Manes.03G086906 Manihot esculenta HOM05D004673 ORTHO05D005596 2.4e-09 66.6 159 32.1
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 3.2e-09 66.2 138 31.9
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 3.2e-09 66.2 135 34.8
AT4G04220 Arabidopsis thaliana HOM05D004673 ORTHO05D005596 4.1e-09 65.9 221 39.8
DCAR_030102 Daucus carota HOM05D004673 ORTHO05D005596 4.1e-09 65.9 227 29.5
QL01p004480 Quercus lobata HOM05D004673 ORTHO05D005596 4.1e-09 65.9 163 31.9
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 5.4e-09 65.5 140 37.9
CARHR253250 Cardamine hirsuta HOM05D004673 ORTHO05D005596 7.0e-09 65.1 138 38.4
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 7.0e-09 65.1 66 51.5
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 7.0e-09 65.1 143 35.7
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 7.0e-09 65.1 138 33.3
BcaB07g31134 Brassica carinata HOM05D004673 ORTHO05D005596 1.2e-08 64.3 164 36.6
Dinv00553 Davidia involucrata HOM05D004673 ORTHO05D005596 1.2e-08 64.3 57 63.2
DCAR_030099 Daucus carota HOM05D004673 ORTHO05D005596 1.6e-08 63.9 122 32.8
AUR62032689 Chenopodium quinoa HOM05D000750 ORTHO05D000714 2.0e-08 63.5 118 37.3
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 2.0e-08 63.5 43 67.4
CARHR253240 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.7e-08 63.2 68 50.0
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 2.7e-08 63.2 161 31.1
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 2.7e-08 63.2 147 34.0
Gorai.007G289600 Gossypium raimondii HOM05D004673 ORTHO05D005596 2.7e-08 63.2 161 30.4
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 3.5e-08 62.8 65 52.3
Aa31LG5G14510 Aethionema arabicum HOM05D004673 ORTHO05D005596 4.6e-08 62.4 209 36.4
Cpa.g.c34637 Carica papaya HOM05D004673 ORTHO05D005596 4.6e-08 62.4 135 38.5
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 4.6e-08 62.4 138 37.7
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 4.6e-08 62.4 63 50.8
Sed0024334 Sechium edule HOM05D004673 ORTHO05D005596 4.6e-08 62.4 135 35.6
CARHR253370 Cardamine hirsuta HOM05D004673 ORTHO05D005596 6.0e-08 62.0 138 37.7
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 7.8e-08 61.6 135 38.5
DCAR_030118 Daucus carota HOM05D004673 ORTHO05D005596 7.8e-08 61.6 113 33.6
DCAR_030108 Daucus carota HOM05D004673 ORTHO05D005596 1.0e-07 61.2 132 38.6
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 1.7e-07 60.5 65 46.2
HanXRQChr13g0405711 Helianthus annuus HOM05D004673 ORTHO05D005596 1.7e-07 60.5 39 69.2
DCAR_030100 Daucus carota HOM05D004673 ORTHO05D005596 2.3e-07 60.1 221 28.5
QL01p004552 Quercus lobata HOM05D004673 ORTHO05D005596 3.0e-07 59.7 137 36.5
QL07p015672 Quercus lobata HOM05D004673 ORTHO05D005596 3.0e-07 59.7 36 75.0
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 5.0e-07 58.9 134 38.1
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 5.0e-07 58.9 199 33.2
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 6.6e-07 58.5 160 32.5
Lsat_1_v5_gn_6_55460 Lactuca sativa HOM05D004673 ORTHO05D005596 6.6e-07 58.5 44 59.1
MBI11_g38090_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 6.6e-07 58.5 137 37.2
Actinidia00906 Actinidia chinensis HOM05D004673 ORTHO05D005596 8.6e-07 58.2 43 60.5
CANSAT11G1431 Cannabis sativa HOM05D004673 ORTHO05D005596 8.6e-07 58.2 142 31.7
DCAR_030110 Daucus carota HOM05D004673 ORTHO05D005596 1.1e-06 57.8 145 32.4
HanXRQChr13g0405741 Helianthus annuus HOM05D004673 ORTHO05D005596 1.1e-06 57.8 39 69.2
HanXRQChr07g0187111 Helianthus annuus HOM05D004673 ORTHO05D005596 1.5e-06 57.4 39 66.7
CARHR253180 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.9e-06 57.0 44 56.8
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 1.9e-06 57.0 161 30.4
DCAR_030112 Daucus carota HOM05D004673 ORTHO05D005596 1.9e-06 57.0 138 34.1
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 2.5e-06 56.6 161 31.1
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 4.3e-06 55.8 112 44.6
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 4.3e-06 55.8 136 32.4
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 4.3e-06 55.8 135 31.1
COL.COLO4_13601 Corchorus olitorius HOM05D000750 ORTHO05D000714 5.6e-06 55.5 105 40.0
CARHR253280 Cardamine hirsuta HOM05D004673 ORTHO05D005596 7.3e-06 55.1 67 46.3
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 7.3e-06 55.1 135 31.1
DCAR_030125 Daucus carota HOM05D004673 ORTHO05D005596 9.5e-06 54.7 155 32.9


User provided reference genes

Program Settings