Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 3.4e-284 981.1 538 100.0
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 4.4e-239 831.2 539 82.7
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 5.8e-207 724.5 535 72.0
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 6.2e-193 677.9 540 66.9
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 1.4e-189 666.8 541 65.2
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 1.2e-188 663.7 535 64.1
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 9.6e-186 654.1 566 62.5
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 7.9e-180 634.4 540 64.1
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 1.8e-179 633.3 541 62.7
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 1.1e-178 630.6 540 63.9
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 3.3e-178 629.0 511 64.4
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 9.6e-178 627.5 535 62.4
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 4.0e-176 622.1 542 61.8
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 6.5e-174 614.8 540 60.4
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 3.2e-173 612.5 541 58.8
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 4.6e-172 608.6 539 60.3
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.0e-171 607.4 554 59.9
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 3.0e-171 605.9 537 59.8
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 5.1e-171 605.1 539 60.1
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.5e-170 603.6 554 59.4
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 1.4e-168 597.0 522 61.3
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 1.2e-167 594.0 539 59.4
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 5.8e-167 591.7 529 58.8
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 1.4e-165 587.0 536 58.4
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 4.1e-160 568.9 540 56.7
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 2.0e-159 566.6 531 55.9
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 1.3e-158 563.9 539 54.9
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 3.8e-158 562.4 536 55.4
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 3.8e-158 562.4 537 55.3
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 8.5e-158 561.2 536 55.2
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 3.2e-157 559.3 539 56.8
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 6.7e-155 551.6 539 55.5
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 8.8e-155 551.2 540 55.0
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 8.8e-155 551.2 537 54.6
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 2.5e-154 549.7 535 55.7
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 3.3e-154 549.3 536 54.3
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 7.4e-154 548.1 535 55.7
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.7e-153 547.0 540 54.6
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 4.8e-153 545.4 533 54.0
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 6.3e-153 545.0 539 54.7
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 1.2e-151 540.8 535 55.0
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 1.3e-150 537.3 539 54.9
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 2.9e-150 536.2 537 53.6
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 8.5e-150 534.6 539 53.6
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.9e-149 533.5 539 54.7
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 3.2e-149 532.7 541 54.0
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 3.2e-149 532.7 531 55.6
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 1.4e-147 527.3 539 52.9
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 3.0e-147 526.2 538 53.2
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 3.0e-147 526.2 539 51.9
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 3.9e-147 525.8 538 53.3
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 3.9e-147 525.8 539 52.5
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 5.1e-147 525.4 548 52.7
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 1.5e-146 523.9 530 55.1
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 1.7e-145 520.4 527 54.5
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 3.1e-144 516.2 541 51.9
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 7.0e-144 515.0 545 52.3
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 2.0e-143 513.5 540 51.5
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 4.5e-143 512.3 471 60.5
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 2.9e-142 509.6 540 51.3
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 3.8e-142 509.2 540 54.6
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 8.5e-142 508.1 537 51.6
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 1.1e-141 507.7 537 51.6
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 1.6e-140 503.8 552 50.5
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 1.4e-139 500.7 538 51.1
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 5.2e-139 498.8 532 52.6
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 1.1e-138 497.7 570 48.9
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 9.7e-138 494.6 536 53.2
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 1.3e-137 494.2 537 50.3
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 5.3e-136 488.8 533 51.4
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 7.7e-135 485.0 552 48.7
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 2.5e-133 479.9 572 47.0
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 2.3e-131 473.4 537 50.1
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 6.8e-131 471.9 540 49.4
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 1.7e-129 467.2 584 48.6
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 3.2e-125 453.0 533 45.8
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 5.5e-125 452.2 535 47.1
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 1.7e-121 440.7 366 62.6
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 4.9e-121 439.1 535 46.0
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.3e-118 431.0 389 58.1
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 3.6e-116 422.9 534 45.7
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 1.3e-113 414.5 350 60.3
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 1.1e-112 411.4 526 43.7
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 5.4e-112 409.1 592 43.8
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 2.3e-110 403.7 456 51.8
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 2.9e-110 403.3 439 50.8
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 1.1e-104 384.8 349 57.3
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 4.7e-100 369.4 348 56.0
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 6.6e-86 322.4 460 43.3
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 2.5e-85 320.5 284 62.7
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 3.3e-85 320.1 281 61.6
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 1.2e-84 318.2 298 57.7
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 4.6e-79 299.7 279 58.1
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 3.3e-77 293.5 382 44.0
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 2.4e-72 277.3 328 48.5
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 2.7e-71 273.9 557 34.6
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 7.4e-69 265.8 580 31.2
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 4.6e-63 246.5 320 45.6
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 9.6e-61 238.8 526 32.1
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 1.3e-60 238.4 571 29.4
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 6.2e-60 236.1 576 29.7
Cpa.g.sc96.48 Carica papaya HOM05D006558 ORTHO05D008424 2.6e-58 230.7 218 56.9
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 1.4e-56 224.9 541 29.8
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 7.1e-56 222.6 541 29.8
Atru.chr11.2433 Acer truncatum HOM05D006558 ORTHO05D008424 3.0e-46 190.7 146 65.1
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 4.8e-44 183.3 131 65.6
DCAR_010374 Daucus carota HOM05D006558 ORTHO05D008424 3.2e-40 170.6 205 48.8
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 7.7e-34 149.4 237 42.6
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 5.1e-30 136.7 331 31.1
MD07G1035200 Malus domestica HOM05D006558 ORTHO05D008424 4.5e-26 123.6 133 50.4
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 3.8e-25 120.6 243 32.5
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.4e-19 102.1 53 90.6
Rhsim12G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.0e-14 84.3 82 61.0
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.0e-13 81.6 66 53.0
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 6.3e-12 76.6 75 54.7
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 7.7e-10 69.7 47 74.5


User provided reference genes

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