Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09244 Davidia involucrata HOM05D003668 ORTHO05D004242 3.6e-120 434.9 209 100.0
Dinv16191 Davidia involucrata HOM05D003668 ORTHO05D004242 6.3e-109 397.5 193 98.4
Dinv05883 Davidia involucrata HOM05D003668 ORTHO05D004242 1.4e-103 379.8 205 88.3
CSS0008273 Camellia sinensis var. sinensis HOM05D003668 ORTHO05D004242 1.2e-94 350.1 205 81.0
TAR622G1157 Trochodendron aralioides HOM05D003668 ORTHO05D004242 4.4e-94 348.2 205 80.5
Actinidia14944 Actinidia chinensis HOM05D003668 ORTHO05D004242 9.7e-94 347.1 205 79.5
Cpa.g.sc65.109 Carica papaya HOM05D003668 ORTHO05D004242 3.7e-93 345.1 205 79.5
GSVIVG01011788001 Vitis vinifera HOM05D003668 ORTHO05D004242 3.7e-93 345.1 193 83.9
Duzib268G0050 Durio zibethinus HOM05D003668 ORTHO05D004242 4.1e-92 341.7 203 80.8
CSS0003505 Camellia sinensis var. sinensis HOM05D003668 ORTHO05D004242 5.3e-92 341.3 193 82.4
COL.COLO4_20446 Corchorus olitorius HOM05D003668 ORTHO05D004242 5.3e-92 341.3 205 80.5
Duzib251G0842 Durio zibethinus HOM05D003668 ORTHO05D004242 2.0e-91 339.3 206 79.6
Rhsim09G0101100 Rhododendron simsii HOM05D003668 ORTHO05D004242 1.3e-90 336.7 205 77.6
DCAR_030206 Daucus carota HOM05D003668 ORTHO05D004242 8.5e-90 334.0 204 77.5
Lj3A875T61 Lonicera japonica HOM05D003668 ORTHO05D004242 8.5e-90 334.0 205 75.6
Prupe.1G321800 Prunus persica HOM05D003668 ORTHO05D004242 1.9e-89 332.8 205 76.6
Atru.chr11.362 Acer truncatum HOM05D003668 ORTHO05D004242 2.5e-89 332.4 205 78.5
Gohir.D02G146200 Gossypium hirsutum HOM05D003668 ORTHO05D004242 2.5e-89 332.4 205 78.5
Gorai.005G163600 Gossypium raimondii HOM05D003668 ORTHO05D004242 3.2e-89 332.0 205 78.5
MD13G1028500 Malus domestica HOM05D003668 ORTHO05D004242 4.2e-89 331.6 204 77.0
Sc11g0004080 Simmondsia chinensis HOM05D003668 ORTHO05D004242 5.5e-89 331.3 205 79.5
CSS0021848 Camellia sinensis var. sinensis HOM05D003668 ORTHO05D004242 2.1e-88 329.3 205 76.6
Thecc.02G278000 Theobroma cacao HOM05D003668 ORTHO05D004242 2.7e-88 328.9 193 80.3
Oeu004307.1 Olea europaea HOM05D003668 ORTHO05D004242 6.1e-88 327.8 205 75.1
Eucgr.B02887 Eucalyptus grandis HOM05D003668 ORTHO05D004242 1.8e-87 326.2 205 76.1
Potri.008G127300 Populus trichocarpa HOM05D003668 ORTHO05D004242 4.0e-87 325.1 205 75.6
Nn4g24060 Nelumbo nucifera HOM05D003668 ORTHO05D004242 6.8e-87 324.3 205 75.1
Glyma.20G124700 Glycine max HOM05D003668 ORTHO05D004242 1.2e-86 323.6 205 75.1
Haze_11039 Corylus avellana HOM05D003668 ORTHO05D004242 1.5e-86 323.2 193 79.8
Hma1.2p1_0601F.1_g187240 Hydrangea macrophylla HOM05D003668 ORTHO05D004242 1.5e-86 323.2 193 76.7
TPR.G4938 Trifolium pratense HOM05D003668 ORTHO05D004242 1.5e-86 323.2 205 74.1
vmacro10624 Vaccinium macrocarpon HOM05D003668 ORTHO05D004242 1.5e-86 323.2 205 75.1
Nitab4.5_0000414g0090 Nicotiana tabacum HOM05D003668 ORTHO05D004242 2.6e-86 322.4 204 73.0
PGSC0003DMG400005962 Solanum tuberosum HOM05D003668 ORTHO05D004242 3.4e-86 322.0 204 73.5
Peaxi162Scf00119g01535 Petunia axillaris HOM05D003668 ORTHO05D004242 4.4e-86 321.6 194 76.3
Sabra08G0096100 Salix brachista HOM05D003668 ORTHO05D004242 4.4e-86 321.6 205 74.6
Medtr1g108590 Medicago truncatula HOM05D003668 ORTHO05D004242 1.7e-85 319.7 205 74.1
TWI31G1185 Tripterygium wilfordii HOM05D003668 ORTHO05D004242 1.7e-85 319.7 206 76.2
Gorai.009G331400 Gossypium raimondii HOM05D003668 ORTHO05D004242 2.8e-85 318.9 205 74.1
FAN22G1857 Fragaria x ananassa HOM05D003668 ORTHO05D004242 4.8e-85 318.2 205 76.6
Lj6C749G7 Lonicera japonica HOM05D003668 ORTHO05D004242 6.3e-85 317.8 209 73.2
SalBow8G3356 Salvia bowleyana HOM05D003668 ORTHO05D004242 6.3e-85 317.8 206 72.3
Gohir.A05G309600 Gossypium hirsutum HOM05D003668 ORTHO05D004242 4.1e-84 315.1 193 75.1
TAR629G1414 Trochodendron aralioides HOM05D003668 ORTHO05D004242 4.1e-84 315.1 193 76.2
Glyma.10G265900 Glycine max HOM05D003668 ORTHO05D004242 5.4e-84 314.7 205 72.7
Potri.010G115700 Populus trichocarpa HOM05D003668 ORTHO05D004242 5.4e-84 314.7 193 76.7
Sabra10G0085600 Salix brachista HOM05D003668 ORTHO05D004242 7.0e-84 314.3 193 76.2
Sabra10G0087300 Salix brachista HOM05D003668 ORTHO05D004242 7.0e-84 314.3 193 76.2
Gohir.A03G123600 Gossypium hirsutum HOM05D003668 ORTHO05D004242 1.6e-83 313.2 193 77.2
Manes.14G135800 Manihot esculenta HOM05D003668 ORTHO05D004242 1.6e-83 313.2 204 72.5
RcHm_v2.0_Chr4g0440821 Rosa chinensis HOM05D003668 ORTHO05D004242 1.6e-83 313.2 193 78.2
Nn3g18032 Nelumbo nucifera HOM05D003668 ORTHO05D004242 2.7e-83 312.4 193 73.1
TWI79G0359 Tripterygium wilfordii HOM05D003668 ORTHO05D004242 2.7e-83 312.4 193 75.6
CANSAT01G1684 Cannabis sativa HOM05D003668 ORTHO05D004242 4.5e-83 311.6 205 73.2
CiPaw.05G247100 Carya illinoinensis HOM05D003668 ORTHO05D004242 4.5e-83 311.6 193 76.7
Manes.06G062100 Manihot esculenta HOM05D003668 ORTHO05D004242 5.9e-83 311.2 193 74.6
Ciclev10015050m.g Citrus clementina HOM05D003668 ORTHO05D004242 1.0e-82 310.5 198 75.8
Gohir.D05G310500 Gossypium hirsutum HOM05D003668 ORTHO05D004242 1.3e-82 310.1 193 74.6
Ca_11103_v3 Cicer arietinum L. HOM05D003668 ORTHO05D004242 2.3e-82 309.3 205 72.2
PGR102G1044 Punica granatum HOM05D003668 ORTHO05D004242 2.3e-82 309.3 205 72.2
Solyc04g007610.3 Solanum lycopersicum HOM05D003668 ORTHO05D004242 2.3e-82 309.3 193 74.1
Aqoxy3G00162 Aquilegia oxysepala HOM05D003668 ORTHO05D004242 2.9e-82 308.9 204 72.5
DCAR_007279 Daucus carota HOM05D003668 ORTHO05D004242 2.9e-82 308.9 205 71.2
Peaxi162Scf00205g00617 Petunia axillaris HOM05D003668 ORTHO05D004242 2.9e-82 308.9 192 74.5
VMungo0720G2186 Vigna mungo HOM05D003668 ORTHO05D004242 2.9e-82 308.9 205 72.2
Sopen04g002690 Solanum pennellii HOM05D003668 ORTHO05D004242 5.0e-82 308.1 193 74.1
Lj5g0008039 Lotus japonicus HOM05D003668 ORTHO05D004242 8.6e-82 307.4 205 71.2
QL01p002314 Quercus lobata HOM05D003668 ORTHO05D004242 8.6e-82 307.4 204 74.0
arahy.Tifrunner.gnm1.ann1.P86RCB Arachis hypogaea HOM05D003668 ORTHO05D004242 1.5e-81 306.6 205 70.7
CiPaw.06G013800 Carya illinoinensis HOM05D003668 ORTHO05D004242 1.5e-81 306.6 193 77.2
arahy.Tifrunner.gnm1.ann1.V9FAYY Arachis hypogaea HOM05D003668 ORTHO05D004242 1.9e-81 306.2 205 70.7
FvH4_4g32120 Fragaria vesca HOM05D003668 ORTHO05D004242 1.9e-81 306.2 193 77.2
Psat6g222240 Pisum sativum HOM05D003668 ORTHO05D004242 3.3e-81 305.4 193 74.1
Cc11_g09050 Coffea canephora HOM05D003668 ORTHO05D004242 4.2e-81 305.1 193 74.6
FAN07G1823 Fragaria x ananassa HOM05D003668 ORTHO05D004242 4.2e-81 305.1 193 76.7
FAN12G3685 Fragaria x ananassa HOM05D003668 ORTHO05D004242 4.2e-81 305.1 193 76.7
Nitab4.5_0004692g0030 Nicotiana tabacum HOM05D003668 ORTHO05D004242 1.6e-80 303.1 193 73.1
Nitab4.5_0004092g0020 Nicotiana tabacum HOM05D003668 ORTHO05D004242 8.0e-80 300.8 192 72.9
AUR62014140 Chenopodium quinoa HOM05D003668 ORTHO05D004242 1.4e-79 300.1 204 68.1
AUR62041242 Chenopodium quinoa HOM05D003668 ORTHO05D004242 3.0e-79 298.9 204 67.6
Lalb_Chr06g0165651 Lupinus albus HOM05D003668 ORTHO05D004242 4.0e-79 298.5 193 71.5
Oeu044332.1 Olea europaea HOM05D003668 ORTHO05D004242 5.2e-79 298.1 205 67.8
Phvul.007G035900 Phaseolus vulgaris HOM05D003668 ORTHO05D004242 8.9e-79 297.4 193 72.0
Lalb_Chr02g0145561 Lupinus albus HOM05D003668 ORTHO05D004242 1.5e-78 296.6 205 69.3
PSO478G1788 Papaver somniferum HOM05D003668 ORTHO05D004242 1.5e-78 296.6 204 68.6
CAN.G359.7 Capsicum annuum HOM05D003668 ORTHO05D004242 2.6e-78 295.8 194 70.1
EL10Ac6g14242 Beta vulgaris HOM05D003668 ORTHO05D004242 3.4e-78 295.4 203 67.0
BolC2t11016H Brassica oleracea HOM05D003668 ORTHO05D004242 1.3e-77 293.5 195 70.3
MELO3C012298.2 Cucumis melo HOM05D003668 ORTHO05D004242 2.8e-77 292.4 202 70.3
C02p49290 Brassica napus HOM05D003668 ORTHO05D004242 4.9e-77 291.6 195 69.7
CARHR143800 Cardamine hirsuta HOM05D003668 ORTHO05D004242 8.3e-77 290.8 193 69.4
Thhalv10000862m.g Eutrema salsugineum HOM05D003668 ORTHO05D004242 8.3e-77 290.8 193 68.4
CAN.G1693.10 Capsicum annuum HOM05D003668 ORTHO05D004242 1.1e-76 290.4 204 69.6
MSTRG.884 Avicennia marina HOM05D003668 ORTHO05D004242 1.8e-76 289.7 208 67.3
BcaC03g17018 Brassica carinata HOM05D003668 ORTHO05D004242 2.4e-76 289.3 194 69.6
SGA_v2.0_scaffold50G18529 Striga asiatica HOM05D003668 ORTHO05D004242 2.4e-76 289.3 197 70.6
AL1G27090 Arabidopsis lyrata HOM05D003668 ORTHO05D004242 4.1e-76 288.5 196 68.4
BcaB02g06567 Brassica carinata HOM05D003668 ORTHO05D004242 5.4e-76 288.1 200 69.0
A02p31850 Brassica napus HOM05D003668 ORTHO05D004242 5.4e-76 288.1 195 69.2
BraA02t08194Z Brassica rapa HOM05D003668 ORTHO05D004242 5.4e-76 288.1 195 69.2
Carub.0005s0025 Capsella rubella HOM05D003668 ORTHO05D004242 9.2e-76 287.3 193 68.9
AT1G15020 Arabidopsis thaliana HOM05D003668 ORTHO05D004242 1.2e-75 287.0 193 69.4
CARHR015560 Cardamine hirsuta HOM05D003668 ORTHO05D004242 1.6e-75 286.6 200 68.0
Migut.L00756 Erythranthe guttata HOM05D003668 ORTHO05D004242 3.5e-75 285.4 207 70.0
CsaV3_5G034880 Cucumis sativus L. HOM05D003668 ORTHO05D004242 4.5e-75 285.0 193 71.0
Sed0001529 Sechium edule HOM05D003668 ORTHO05D004242 5.9e-75 284.6 193 68.4
Sp1g13410 Schrenkiella parvula HOM05D003668 ORTHO05D004242 7.8e-75 284.3 197 68.0
Aa31LG1G80 Aethionema arabicum HOM05D003668 ORTHO05D004242 1.3e-74 283.5 199 67.3
AL5G10220 Arabidopsis lyrata HOM05D003668 ORTHO05D004242 2.3e-74 282.7 193 67.9
C05p13170 Brassica napus HOM05D003668 ORTHO05D004242 2.3e-74 282.7 198 67.7
Aa31LG2G8640 Aethionema arabicum HOM05D003668 ORTHO05D004242 2.9e-74 282.3 194 67.0
ClCG05G022250 Citrullus lanatus HOM05D003668 ORTHO05D004242 3.9e-74 282.0 195 70.3
Sp2g12730 Schrenkiella parvula HOM05D003668 ORTHO05D004242 5.0e-74 281.6 193 66.3
ECA246G0677 Erigeron canadensis HOM05D003668 ORTHO05D004242 8.6e-74 280.8 193 68.9
PSO017G0236 Papaver somniferum HOM05D003668 ORTHO05D004242 8.6e-74 280.8 193 68.4
BraA06t24284Z Brassica rapa HOM05D003668 ORTHO05D004242 4.3e-73 278.5 199 66.8
MBI05_g00408_MAGBIO Magnolia biondii HOM05D003668 ORTHO05D004242 7.3e-73 277.7 202 67.3
C07p31700 Brassica napus HOM05D003668 ORTHO05D004242 1.2e-72 276.9 193 65.8
BolC7t43709H Brassica oleracea HOM05D003668 ORTHO05D004242 1.2e-72 276.9 193 65.8
BcaC05g25439 Brassica carinata HOM05D003668 ORTHO05D004242 3.6e-72 275.4 198 65.7
BolC5t30053H Brassica oleracea HOM05D003668 ORTHO05D004242 3.6e-72 275.4 198 65.7
HanXRQChr08g0212821 Helianthus annuus HOM05D003668 ORTHO05D004242 4.7e-72 275.0 194 68.0
HanXRQChr15g0477351 Helianthus annuus HOM05D003668 ORTHO05D004242 4.7e-72 275.0 193 67.9
MBI10_g37695_MAGBIO Magnolia biondii HOM05D003668 ORTHO05D004242 6.1e-72 274.6 195 67.7
AT2G01270 Arabidopsis thaliana HOM05D003668 ORTHO05D004242 1.0e-71 273.9 193 65.8
BcaB07g30412 Brassica carinata HOM05D003668 ORTHO05D004242 1.0e-71 273.9 194 66.5
A06p11040 Brassica napus HOM05D003668 ORTHO05D004242 1.4e-71 273.5 199 65.8
BolC8t52070H Brassica oleracea HOM05D003668 ORTHO05D004242 4.0e-71 271.9 198 65.2
A09p61640 Brassica napus HOM05D003668 ORTHO05D004242 5.2e-71 271.6 198 64.6
BraA09t41536Z Brassica rapa HOM05D003668 ORTHO05D004242 5.2e-71 271.6 198 64.6
Nitab4.5_0001648g0080 Nicotiana tabacum HOM05D003668 ORTHO05D004242 6.8e-71 271.2 175 70.9
Migut.L00659 Erythranthe guttata HOM05D003668 ORTHO05D004242 1.2e-70 270.4 195 69.7
C08p45220 Brassica napus HOM05D003668 ORTHO05D004242 1.5e-70 270.0 198 64.6
Sed0014721 Sechium edule HOM05D003668 ORTHO05D004242 2.0e-70 269.6 202 64.4
CDE06G0369 Ceratophyllum demersum HOM05D003668 ORTHO05D004242 2.6e-70 269.2 193 64.2
Migut.E00406 Erythranthe guttata HOM05D003668 ORTHO05D004242 7.5e-70 267.7 208 63.0
Lsat_1_v5_gn_8_42960 Lactuca sativa HOM05D003668 ORTHO05D004242 3.7e-69 265.4 198 64.1
ATR0326G075 Amborella trichopoda HOM05D003668 ORTHO05D004242 6.4e-69 264.6 193 67.9
HanXRQChr15g0488541 Helianthus annuus HOM05D003668 ORTHO05D004242 6.4e-69 264.6 196 63.3
CDE07G1523 Ceratophyllum demersum HOM05D003668 ORTHO05D004242 1.9e-68 263.1 193 62.7
Lsat_1_v5_gn_3_54180 Lactuca sativa HOM05D003668 ORTHO05D004242 2.0e-67 259.6 196 64.3
BcaB02g06571 Brassica carinata HOM05D003668 ORTHO05D004242 7.8e-67 257.7 197 62.4
Thhalv10007339m.g Eutrema salsugineum HOM05D003668 ORTHO05D004242 2.3e-66 256.1 196 61.7
Carub.0001s1479 Capsella rubella HOM05D003668 ORTHO05D004242 3.9e-66 255.4 196 61.7
HPP92_020133 Vanilla planifolia HOM05D003668 ORTHO05D004242 1.9e-57 226.5 193 53.9
unitig_27.g25262 Utricularia gibba HOM05D003668 ORTHO05D004242 2.9e-53 212.6 138 68.8
Hma1.2p1_0114F.1_g055230 Hydrangea macrophylla HOM05D003668 ORTHO05D004242 8.3e-53 211.1 135 74.8
ECA233G5938 Erigeron canadensis HOM05D003668 ORTHO05D004242 1.5e-49 200.3 153 65.4
SMO092G0001 Selaginella moellendorffii HOM05D003668 ORTHO05D004242 7.1e-44 181.4 195 47.7
Zm00001eb295030 Zea mays HOM05D003668 ORTHO05D004242 9.2e-44 181.0 111 71.2
Lalb_Chr21g0308531 Lupinus albus HOM05D003668 ORTHO05D004242 6.6e-42 174.9 196 50.0
Mapoly0013s0166 Marchantia polymorpha HOM05D003668 ORTHO05D004242 7.6e-38 161.4 197 41.6
SMO351G0322 Selaginella moellendorffii HOM05D003668 ORTHO05D004242 4.8e-32 142.1 193 40.4
CBR_g58693 Chara braunii HOM05D003668 ORTHO05D004242 6.2e-32 141.7 215 35.8
Pp3c20_23660 Physcomitrium patens HOM05D003668 ORTHO05D004242 1.8e-26 123.6 196 36.2
HPP92_020123 Vanilla planifolia HOM05D003668 ORTHO05D004242 9.3e-20 101.3 151 40.4
Medtr1g108520 Medicago truncatula HOM05D003668 ORTHO05D004242 1.2e-19 100.9 150 41.3
Pp3c21_14060 Physcomitrium patens HOM05D003668 ORTHO05D004242 7.9e-19 98.2 187 31.6
MCO15G061 Micromonas commoda HOM05D003668 ORTHO05D004242 5.1e-18 95.5 140 38.6
PRCOL_00000170 Prasinoderma coloniale HOM05D003668 ORTHO05D004242 1.1e-17 94.4 133 39.8
Cre04.g230928 Chlamydomonas reinhardtii HOM05D003668 ORTHO05D004242 5.7e-17 92.0 140 35.7
Pp3c1_7010 Physcomitrium patens HOM05D003668 ORTHO05D004242 1.6e-16 90.5 129 36.4
Pp3c19_11370 Physcomitrium patens HOM05D003668 ORTHO05D004242 5.3e-15 85.5 197 31.0
Medtr0121s0090 Medicago truncatula HOM05D003668 ORTHO05D004242 1.9e-12 77.0 75 54.7
SHI16331 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-11 74.3 43 72.1
Nn6g35717 Nelumbo nucifera HOM05D003668 ORTHO05D004242 6.1e-11 72.0 47 66.0


User provided reference genes

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