Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09232 Davidia involucrata HOM05D000286 ORTHO05D022410 1.8e-138 496.1 296 100.0
CSS0034497 Camellia sinensis var. sinensis HOM05D000286 ORTHO05D000170 1.5e-39 167.5 139 65.5
Dinv23380 Davidia involucrata HOM05D000286 ORTHO05D000170 9.1e-37 158.3 138 72.5
Dinv06047 Davidia involucrata HOM05D000286 ORTHO05D022410 2.0e-36 157.1 98 88.8
Dinv27914 Davidia involucrata HOM05D000286 ORTHO05D022410 1.7e-35 154.1 112 79.5
Dinv15234 Davidia involucrata HOM05D000286 ORTHO05D022410 3.6e-33 146.4 101 76.2
Dinv16827 Davidia involucrata HOM05D000286 ORTHO05D022410 3.0e-32 143.3 141 60.3
Actinidia30283 Actinidia chinensis HOM05D000286 ORTHO05D000170 8.8e-32 141.7 138 58.0
Nn6g35305 Nelumbo nucifera HOM05D000286 ORTHO05D000170 2.8e-30 136.7 138 63.0
SalBow4G2794 Salvia bowleyana HOM05D000286 ORTHO05D000170 1.4e-29 134.4 137 53.3
TAR383G0907 Trochodendron aralioides HOM05D000286 ORTHO05D000170 1.4e-29 134.4 138 54.3
Oeu023210.1 Olea europaea HOM05D000286 ORTHO05D000170 2.0e-28 130.6 137 62.8
MBI04_g06588_MAGBIO Magnolia biondii HOM05D000286 ORTHO05D000170 8.5e-27 125.2 139 53.2
Oeu043890.1 Olea europaea HOM05D000286 ORTHO05D000170 1.9e-26 124.0 138 48.6
Actinidia14681 Actinidia chinensis HOM05D000286 ORTHO05D000170 2.5e-26 123.6 136 54.4
Aqoxy7G03884 Aquilegia oxysepala HOM05D000286 ORTHO05D000170 2.5e-26 123.6 138 51.4
unitig_748.g7991 Utricularia gibba HOM05D000286 ORTHO05D000170 1.0e-24 118.2 136 50.0
Cc08_g09810 Coffea canephora HOM05D000286 ORTHO05D022410 2.3e-24 117.1 150 48.0
Actinidia15741 Actinidia chinensis HOM05D000286 ORTHO05D000170 2.0e-23 114.0 136 55.1
Lsat_1_v5_gn_1_45761 Lactuca sativa HOM05D000286 ORTHO05D000170 2.0e-23 114.0 139 52.5
vmacro05264 Vaccinium macrocarpon HOM05D000286 ORTHO05D000170 9.8e-23 111.7 136 53.7
Migut.A00193 Erythranthe guttata HOM05D000286 ORTHO05D000170 2.8e-22 110.2 139 52.5
Atru.chr7.2071 Acer truncatum HOM05D000286 ORTHO05D000170 1.4e-21 107.8 139 48.9
Rhsim07G0146500 Rhododendron simsii HOM05D000286 ORTHO05D000170 5.4e-21 105.9 136 48.5
Duzib168G1356 Durio zibethinus HOM05D000286 ORTHO05D000170 7.7e-20 102.1 139 49.6
PGSC0003DMG400004483 Solanum tuberosum HOM05D000286 ORTHO05D000170 8.6e-19 98.6 139 54.0
Gohir.D07G025400 Gossypium hirsutum HOM05D000286 ORTHO05D000170 1.1e-18 98.2 141 46.1
Ciclev10008638m.g Citrus clementina HOM05D000286 ORTHO05D000170 1.5e-18 97.8 139 43.9
Gohir.A06G092100 Gossypium hirsutum HOM05D000286 ORTHO05D000170 7.2e-18 95.5 133 45.1
Gohir.A07G022257 Gossypium hirsutum HOM05D000286 ORTHO05D000170 7.2e-18 95.5 141 44.7
Gohir.D06G091600 Gossypium hirsutum HOM05D000286 ORTHO05D000170 7.2e-18 95.5 133 45.1
Gorai.001G026500 Gossypium raimondii HOM05D000286 ORTHO05D000170 7.2e-18 95.5 140 45.0
Gorai.010G105600 Gossypium raimondii HOM05D000286 ORTHO05D000170 7.2e-18 95.5 133 45.1
Nitab4.5_0000239g0040 Nicotiana tabacum HOM05D000286 ORTHO05D000170 7.2e-18 95.5 141 50.4
Peaxi162Scf00654g00610 Petunia axillaris HOM05D000286 ORTHO05D000170 7.2e-18 95.5 133 54.9
Sc06g0000830 Simmondsia chinensis HOM05D000286 ORTHO05D000170 1.2e-17 94.7 138 47.1
HanXRQChr04g0108831 Helianthus annuus HOM05D000286 ORTHO05D000170 2.8e-17 93.6 146 41.8
Nitab4.5_0007887g0030 Nicotiana tabacum HOM05D000286 ORTHO05D000170 2.8e-17 93.6 138 51.4
Manes.16G074300 Manihot esculenta HOM05D000286 ORTHO05D000170 3.6e-17 93.2 139 45.3
Cpa.g.sc1834.2 Carica papaya HOM05D000286 ORTHO05D000170 4.7e-17 92.8 138 42.8
CAN.G20.26 Capsicum annuum HOM05D000286 ORTHO05D000170 6.1e-17 92.4 138 50.0
Gohir.A05G045900 Gossypium hirsutum HOM05D000286 ORTHO05D000170 1.8e-16 90.9 141 44.7
Lj8C571G1 Lonicera japonica HOM05D000286 ORTHO05D000170 2.3e-16 90.5 66 68.2
Solyc08g066440.3 Solanum lycopersicum HOM05D000286 ORTHO05D000170 2.3e-16 90.5 138 50.0
Sopen08g020270 Solanum pennellii HOM05D000286 ORTHO05D000170 2.3e-16 90.5 138 50.0
Gorai.009G048900 Gossypium raimondii HOM05D000286 ORTHO05D000170 3.0e-16 90.1 141 44.7
MSTRG.25915 Avicennia marina HOM05D000286 ORTHO05D000170 4.0e-16 89.7 141 48.9
DCAR_007720 Daucus carota HOM05D000286 ORTHO05D000170 8.8e-16 88.6 138 50.0
Hund19500 Selenicereus undatus HOM05D000286 ORTHO05D000170 8.8e-16 88.6 134 44.0
COL.COLO4_20986 Corchorus olitorius HOM05D000286 ORTHO05D000170 1.2e-15 88.2 64 65.6
ECA248G2263 Erigeron canadensis HOM05D000286 ORTHO05D000170 1.2e-15 88.2 137 48.9
Gohir.D05G047600 Gossypium hirsutum HOM05D000286 ORTHO05D000170 4.4e-15 86.3 141 43.3
SGA_v2.0_scaffold243G44273 Striga asiatica HOM05D000286 ORTHO05D000170 7.5e-15 85.5 137 46.7
PSO210G1130 Papaver somniferum HOM05D000286 ORTHO05D000170 4.9e-14 82.8 138 52.2
PSO210G5432 Papaver somniferum HOM05D000286 ORTHO05D000170 4.9e-14 82.8 138 52.2
Ca_15582_v3 Cicer arietinum L. HOM05D000286 ORTHO05D000170 8.3e-14 82.0 136 44.9
Psat5g021360 Pisum sativum HOM05D000286 ORTHO05D000170 8.3e-14 82.0 135 43.0
Lalb_Chr23g0269671 Lupinus albus HOM05D000286 ORTHO05D000170 1.4e-13 81.3 138 43.5
Sabra06G0185300 Salix brachista HOM05D000286 ORTHO05D000170 1.8e-13 80.9 136 41.9
arahy.Tifrunner.gnm1.ann1.WQGS78 Arachis hypogaea HOM05D000286 ORTHO05D000170 2.4e-13 80.5 143 43.4
Lj1g0027500 Lotus japonicus HOM05D000286 ORTHO05D000170 2.4e-13 80.5 139 41.7
Potri.018G045800 Populus trichocarpa HOM05D000286 ORTHO05D000170 2.4e-13 80.5 133 44.4
Aa31LG3G15540 Aethionema arabicum HOM05D000286 ORTHO05D000170 4.1e-13 79.7 138 40.6
HanXRQChr11g0352381 Helianthus annuus HOM05D000286 ORTHO05D000170 4.1e-13 79.7 138 46.4
Medtr3g109870 Medicago truncatula HOM05D000286 ORTHO05D000170 1.2e-12 78.2 134 43.3
Lalb_Chr08g0242981 Lupinus albus HOM05D000286 ORTHO05D000170 1.6e-12 77.8 135 43.7
arahy.Tifrunner.gnm1.ann1.PEW7PV Arachis hypogaea HOM05D000286 ORTHO05D000170 2.0e-12 77.4 143 42.7
Lalb_Chr11g0064551 Lupinus albus HOM05D000286 ORTHO05D000170 2.0e-12 77.4 135 43.0
CiPaw.07G203000 Carya illinoinensis HOM05D000286 ORTHO05D000170 2.7e-12 77.0 136 41.9
AUR62041972 Chenopodium quinoa HOM05D000286 ORTHO05D000170 3.5e-12 76.6 148 39.9
Glyma.04G085500 Glycine max HOM05D000286 ORTHO05D000170 4.5e-12 76.3 138 43.5
Hund19518 Selenicereus undatus HOM05D044026 ORTHO05D000170 5.9e-12 75.9 132 37.1
TPR.G15102 Trifolium pratense HOM05D000286 ORTHO05D000170 1.0e-11 75.1 135 40.7
RcHm_v2.0_Chr6g0306501 Rosa chinensis HOM05D000286 ORTHO05D000170 2.3e-11 73.9 140 39.3
MD08G1112500 Malus domestica HOM05D000286 ORTHO05D000170 2.9e-11 73.6 136 41.9
Duzib150G0730 Durio zibethinus HOM05D000286 ORTHO05D000170 5.0e-11 72.8 139 47.5
FAN15G0888 Fragaria x ananassa HOM05D000286 ORTHO05D000170 5.0e-11 72.8 140 39.3
Carub.0006s1013 Capsella rubella HOM05D000286 ORTHO05D000170 6.6e-11 72.4 139 37.4
MD15G1091700 Malus domestica HOM05D000286 ORTHO05D000170 8.6e-11 72.0 136 40.4
Thecc.09G046700 Theobroma cacao HOM05D000286 ORTHO05D000170 1.1e-10 71.6 139 46.8
Eucgr.C00607 Eucalyptus grandis HOM05D000286 ORTHO05D000170 1.9e-10 70.9 143 37.8
Sabra18G0044800 Salix brachista HOM05D000286 ORTHO05D000170 2.5e-10 70.5 143 38.5
BcaB08g37035 Brassica carinata HOM05D000286 ORTHO05D000170 4.3e-10 69.7 139 35.3
CSS0010141 Camellia sinensis var. sinensis HOM05D000286 ORTHO05D000170 1.2e-09 68.2 39 79.5
THA.LOC104799189 Tarenaya hassleriana HOM05D000286 ORTHO05D000170 1.6e-09 67.8 139 43.9
Duzib187G1408 Durio zibethinus HOM05D000286 ORTHO05D000170 4.7e-09 66.2 141 45.4
CANSAT25G3686 Cannabis sativa HOM05D000286 ORTHO05D000170 6.1e-09 65.9 138 34.8
Hund03387 Selenicereus undatus HOM05D000286 ORTHO05D000170 8.0e-09 65.5 137 47.4
CDE05G2046 Ceratophyllum demersum HOM05D000286 ORTHO05D000170 1.8e-08 64.3 107 38.3
AL6G22360 Arabidopsis lyrata HOM05D000286 ORTHO05D000170 3.0e-08 63.5 136 35.3
AT5G11650 Arabidopsis thaliana HOM05D000286 ORTHO05D000170 3.0e-08 63.5 139 33.8
Phvul.009G110900 Phaseolus vulgaris HOM05D000286 ORTHO05D000170 4.0e-08 63.2 137 46.0
Dinv12191 Davidia involucrata HOM05D000286 ORTHO05D185238 5.2e-08 62.8 50 68.0
Thhalv10013735m.g Eutrema salsugineum HOM05D000286 ORTHO05D000170 1.2e-07 61.6 142 40.1
PGR031G0935 Punica granatum HOM05D000286 ORTHO05D000170 2.6e-07 60.5 132 42.4
Cfa013378 Carpinus fangiana HOM05D000286 ORTHO05D000170 5.7e-07 59.3 138 43.5
TWI63G0846 Tripterygium wilfordii HOM05D000286 ORTHO05D000170 5.7e-07 59.3 138 44.9
Ah.10g034910 Amaranthus hybridus HOM05D000286 ORTHO05D000170 1.3e-06 58.2 144 39.6
Sed0014232 Sechium edule HOM05D000286 ORTHO05D000170 2.2e-06 57.4 138 42.8
FvH4_2g35400 Fragaria vesca HOM05D000286 ORTHO05D000170 2.9e-06 57.0 140 35.0
VMungo1309G1083 Vigna mungo HOM05D000286 ORTHO05D000170 2.9e-06 57.0 134 43.3
Zm00001eb120470 Zea mays HOM05D000286 ORTHO05D000170 2.9e-06 57.0 130 46.2
Haze_21903 Corylus avellana HOM05D000286 ORTHO05D000170 3.7e-06 56.6 138 42.8
ClCG08G012150 Citrullus lanatus HOM05D000286 ORTHO05D000170 4.9e-06 56.2 138 41.3
FAN20G1007 Fragaria x ananassa HOM05D000286 ORTHO05D000170 4.9e-06 56.2 140 35.0
Sp6g31970 Schrenkiella parvula HOM05D000286 ORTHO05D000170 6.4e-06 55.8 137 31.4
GSVIVG01035608001 Vitis vinifera HOM05D000286 ORTHO05D000170 6.4e-06 55.8 39 61.5
BolC9t59346H Brassica oleracea HOM05D000286 ORTHO05D000170 8.3e-06 55.5 139 37.4


User provided reference genes

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