Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 8.7e-139 496.9 240 100.0
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 4.2e-101 371.7 228 78.5
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 6.3e-97 357.8 228 73.2
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.4e-96 356.7 234 72.6
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 1.8e-96 356.3 233 76.0
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 4.1e-96 355.1 234 70.9
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 9.2e-96 354.0 229 76.0
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 9.2e-96 354.0 229 72.1
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 4.5e-95 351.7 230 73.9
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 4.5e-95 351.7 233 75.1
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 2.5e-93 345.9 226 71.2
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 3.3e-93 345.5 234 72.6
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 4.3e-93 345.1 230 72.2
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 9.5e-93 344.0 230 73.9
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 2.8e-92 342.4 230 72.6
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 8.0e-92 340.9 234 72.2
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 6.8e-91 337.8 228 71.9
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 8.9e-91 337.4 232 70.7
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 9.8e-90 334.0 228 74.1
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.3e-89 333.6 232 69.0
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 2.9e-89 332.4 237 66.7
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.4e-88 330.1 232 67.7
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 5.4e-88 328.2 236 67.4
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 1.2e-87 327.0 199 79.4
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 1.6e-87 326.6 230 70.0
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.1e-85 320.5 227 67.0
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 5.6e-85 318.2 232 63.8
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 9.5e-85 317.4 229 65.1
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 1.6e-84 316.6 228 68.9
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 2.1e-84 316.2 228 68.9
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 4.0e-83 312.0 201 73.6
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 1.7e-81 306.6 228 65.8
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 2.9e-81 305.8 229 63.8
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 4.9e-81 305.1 228 64.5
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 8.3e-81 304.3 231 67.5
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 5.4e-80 301.6 237 67.5
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.7e-79 299.3 233 65.2
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 3.5e-79 298.9 233 65.7
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 3.9e-78 295.4 178 79.8
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.9e-78 295.4 241 63.9
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 6.6e-78 294.7 237 64.6
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.5e-77 293.5 244 60.2
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 2.5e-77 292.7 234 64.5
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.5e-77 292.7 230 63.5
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 2.5e-77 292.7 232 62.9
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 5.6e-77 291.6 210 68.1
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.2e-76 288.1 216 66.2
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 5.2e-75 285.0 231 61.9
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 8.9e-75 284.3 216 67.1
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 8.9e-75 284.3 248 60.9
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 4.4e-74 282.0 219 64.4
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.4e-74 282.0 183 72.7
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 4.4e-74 282.0 194 71.6
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.9e-73 279.3 232 60.8
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 6.4e-73 278.1 245 62.0
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 1.4e-72 276.9 233 61.8
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 5.4e-72 275.0 231 62.3
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 9.2e-72 274.2 242 60.7
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 2.1e-71 273.1 229 61.1
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 2.7e-71 272.7 232 59.1
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.6e-71 271.9 208 65.9
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 4.6e-71 271.9 208 65.9
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 4.6e-71 271.9 230 59.6
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.7e-70 270.0 232 59.5
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 2.3e-70 269.6 231 58.4
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 3.0e-70 269.2 231 61.0
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 3.0e-70 269.2 267 56.6
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 3.9e-70 268.9 229 61.6
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 5.1e-70 268.5 230 60.0
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 6.6e-70 268.1 225 60.4
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 8.6e-70 267.7 169 78.1
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.5e-69 266.9 231 60.2
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 7.3e-69 264.6 232 58.6
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.2e-68 263.8 232 59.5
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.6e-68 263.5 232 59.5
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 3.6e-68 262.3 235 58.7
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 5.2e-67 258.5 277 55.6
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 1.3e-65 253.8 278 52.5
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 3.8e-65 252.3 234 58.1
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 8.4e-65 251.1 232 58.2
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.4e-64 250.4 186 65.6
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 1.9e-61 240.0 232 55.6
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 9.6e-61 237.7 200 60.0
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 2.1e-60 236.5 213 54.0
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 6.9e-59 231.5 183 65.0
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.2e-58 230.7 197 57.4
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 2.6e-58 229.6 205 60.0
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 7.6e-58 228.0 246 50.0
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.7e-57 226.9 175 64.6
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 2.2e-57 226.5 174 61.5
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 8.4e-57 224.6 232 54.7
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.9e-56 223.4 145 68.3
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 2.4e-56 223.0 232 52.6
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.5e-53 213.8 143 71.3
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.5e-53 213.0 167 63.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.6e-53 211.8 162 64.8
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.0e-46 191.0 211 45.5
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.5e-45 186.4 146 66.4
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.8e-44 182.2 143 66.4
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 2.2e-41 173.3 159 57.2
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 2.4e-40 169.9 213 46.5
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 1.6e-39 167.2 124 62.9
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.8e-35 153.7 225 38.7
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 4.0e-35 152.5 209 42.1
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 5.9e-26 122.1 60 91.7
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.7e-25 120.6 128 52.3
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.9e-22 109.4 71 70.4
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.3e-21 105.9 69 72.5
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 3.2e-16 89.7 129 36.4
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 6.1e-15 85.5 179 35.8
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.0e-14 84.7 66 65.2
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 6.7e-14 82.0 178 29.8
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 1.5e-13 80.9 146 35.6
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 2.8e-12 76.6 81 46.9
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 9.1e-11 71.6 76 50.0
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.4e-10 69.7 96 46.9
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 6.5e-09 65.5 36 72.2
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 1.1e-08 64.7 55 54.5
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.2e-08 63.2 35 71.4
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 9.4e-08 61.6 41 65.9
AagrBONN_evm.TU.Sc2ySwM_344.2366 Anthoceros agrestis HOM05D006411 ORTHO05D007563 3.9e-06 56.2 71 45.1


User provided reference genes

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