Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 6.0e-88 327.4 158 100.0
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 7.7e-51 204.1 138 72.5
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 7.7e-51 204.1 138 72.5
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 6.5e-50 201.1 134 70.1
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.1e-49 200.3 149 67.1
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 1.1e-49 200.3 144 71.5
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 9.4e-49 197.2 140 66.4
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.2e-48 196.8 141 69.5
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 2.1e-48 196.1 140 67.1
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 4.7e-48 194.9 139 70.5
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 4.7e-48 194.9 140 68.6
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 6.1e-48 194.5 141 70.2
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.0e-47 193.7 125 73.6
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.3e-47 192.6 140 65.0
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 3.0e-47 192.2 154 65.6
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 5.2e-47 191.4 123 70.7
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.5e-46 189.9 127 70.1
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.5e-46 189.9 132 71.2
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 2.0e-46 189.5 138 66.7
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 2.0e-46 189.5 129 72.1
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 3.4e-46 188.7 144 63.9
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 4.4e-46 188.3 139 66.9
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 9.8e-46 187.2 125 69.6
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.7e-45 186.4 135 68.1
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.7e-45 186.4 140 65.0
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 2.2e-45 186.0 128 71.1
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 2.2e-45 186.0 138 66.7
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 3.7e-45 185.3 140 68.6
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 4.8e-45 184.9 139 65.5
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 6.3e-45 184.5 142 63.4
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 6.3e-45 184.5 140 64.3
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 1.4e-44 183.3 136 64.7
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.8e-44 183.0 139 67.6
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.4e-44 182.6 136 64.7
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 3.1e-44 182.2 138 66.7
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 4.1e-44 181.8 162 58.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 5.4e-44 181.4 139 64.0
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 7.0e-44 181.0 154 57.8
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 1.2e-43 180.3 140 64.3
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.0e-43 179.5 136 64.0
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 2.0e-43 179.5 138 62.3
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 3.5e-43 178.7 142 65.5
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 4.5e-43 178.3 133 64.7
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 4.5e-43 178.3 138 65.2
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 7.7e-43 177.6 142 63.4
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 7.7e-43 177.6 140 61.4
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.0e-42 177.2 141 64.5
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.0e-42 177.2 120 66.7
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.3e-42 176.8 141 64.5
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 2.9e-42 175.6 120 70.0
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.9e-42 175.6 140 62.9
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 5.0e-42 174.9 142 60.6
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 5.0e-42 174.9 118 67.8
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 2.5e-41 172.6 133 63.2
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 3.2e-41 172.2 146 61.0
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 7.2e-41 171.0 109 72.5
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 9.5e-41 170.6 134 61.9
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.0e-39 167.2 140 60.0
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 1.0e-39 167.2 140 60.0
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.3e-39 166.0 157 55.4
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.0e-39 165.6 120 65.0
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 5.2e-39 164.9 141 58.2
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 6.8e-39 164.5 129 65.1
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 1.2e-38 163.7 145 58.6
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.5e-38 163.3 120 65.0
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.5e-38 163.3 120 65.0
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.0e-38 162.9 120 65.8
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 2.6e-38 162.5 145 57.2
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 3.4e-38 162.2 113 66.4
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 5.7e-38 161.4 119 68.1
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 5.7e-38 161.4 120 65.0
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 7.5e-38 161.0 120 63.3
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.3e-37 160.2 120 66.7
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 2.8e-37 159.1 140 58.6
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 3.7e-37 158.7 116 65.5
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 4.9e-37 158.3 103 73.8
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 1.1e-36 157.1 116 63.8
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.1e-36 157.1 121 61.2
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 1.1e-36 157.1 139 58.3
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 3.1e-36 155.6 107 70.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 3.5e-35 152.1 143 53.1
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.3e-34 150.2 109 66.1
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.3e-34 149.4 99 72.7
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 6.6e-34 147.9 145 53.8
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.5e-33 146.7 217 41.5
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 5.6e-33 144.8 130 56.2
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 7.3e-33 144.4 109 60.6
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.8e-32 142.5 109 61.5
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 2.8e-32 142.5 109 63.3
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 6.1e-32 141.4 109 62.4
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 4.0e-31 138.7 130 56.2
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 3.4e-30 135.6 89 67.4
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.7e-29 133.3 89 68.5
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 3.2e-28 129.0 97 63.9
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 4.1e-28 128.6 98 68.4
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 7.0e-28 127.9 112 53.6
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.0e-27 126.3 148 44.6
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 5.9e-27 124.8 112 52.7
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 7.8e-27 124.4 141 52.5
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 2.5e-25 119.4 112 44.6
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 7.3e-25 117.9 78 70.5
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 3.1e-23 112.5 118 50.0
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 3.1e-23 112.5 114 50.9
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 4.6e-19 98.6 134 41.0
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 6.0e-19 98.2 118 40.7
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 2.3e-18 96.3 62 74.2
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 3.9e-18 95.5 61 72.1
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.5e-17 92.8 92 51.1
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 8.1e-16 87.8 61 65.6
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 1.6e-11 73.6 45 71.1
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 6.0e-11 71.6 39 87.2
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.2e-08 61.6 74 44.6
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.1e-07 60.8 89 38.2
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 4.0e-07 58.9 39 66.7


User provided reference genes

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