Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 6.4e-105 384.0 185 100.0
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.0e-46 190.7 132 69.7
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 5.1e-46 188.3 127 72.4
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 8.7e-46 187.6 135 71.9
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 8.7e-46 187.6 135 71.9
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 5.7e-45 184.9 131 65.6
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 2.2e-44 183.0 131 64.9
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 3.7e-44 182.2 131 64.1
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 4.8e-44 181.8 137 66.4
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 8.2e-44 181.0 136 64.7
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 1.1e-43 180.6 131 64.1
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 4.1e-43 178.7 137 65.7
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 3.4e-42 175.6 138 67.4
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.9e-40 169.9 138 65.2
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 5.5e-40 168.3 131 64.1
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 2.7e-39 166.0 136 61.0
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 1.0e-38 164.1 108 70.4
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 6.7e-38 161.4 137 59.9
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 2.0e-37 159.8 135 60.0
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 2.0e-37 159.8 135 60.0
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 4.4e-37 158.7 138 60.1
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 4.4e-37 158.7 131 60.3
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 7.4e-37 157.9 142 58.5
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 9.7e-37 157.5 137 59.9
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 9.7e-37 157.5 137 56.9
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.7e-36 156.8 134 59.0
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 2.2e-36 156.4 140 56.4
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 2.2e-36 156.4 134 58.2
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 3.7e-36 155.6 141 62.4
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 4.8e-36 155.2 141 61.7
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 1.1e-35 154.1 136 58.1
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.1e-35 154.1 141 59.6
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 3.1e-35 152.5 135 57.0
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 4.1e-35 152.1 136 59.6
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 5.3e-35 151.8 134 58.2
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 9.1e-35 151.0 133 57.1
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.5e-34 150.2 131 57.3
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.0e-34 149.8 126 61.9
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.6e-34 149.4 133 57.9
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 2.6e-34 149.4 133 57.9
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.4e-34 149.1 134 57.5
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 4.5e-34 148.7 140 57.1
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 4.5e-34 148.7 141 58.2
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 7.7e-34 147.9 135 60.0
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 1.3e-33 147.1 134 58.2
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 5.0e-33 145.2 135 59.3
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 6.5e-33 144.8 144 56.2
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.9e-32 143.3 133 58.6
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 2.5e-32 142.9 133 60.9
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 3.2e-32 142.5 137 57.7
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 7.2e-32 141.4 137 58.4
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 7.2e-32 141.4 132 54.5
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 7.2e-32 141.4 142 57.0
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 7.2e-32 141.4 139 56.8
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 1.2e-31 140.6 135 57.0
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 1.6e-31 140.2 140 52.9
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 2.1e-31 139.8 136 56.6
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 2.1e-31 139.8 135 54.8
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 3.6e-31 139.0 136 55.9
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 6.1e-31 138.3 133 56.4
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 2.3e-30 136.3 138 52.2
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 3.0e-30 136.0 140 52.9
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 3.0e-30 136.0 134 56.0
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 3.0e-30 136.0 135 51.9
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 5.2e-30 135.2 135 50.4
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 6.7e-30 134.8 139 53.2
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 1.1e-29 134.0 130 53.1
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 2.6e-29 132.9 137 51.8
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 5.7e-29 131.7 86 69.8
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 7.4e-29 131.3 137 49.6
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 9.7e-29 131.0 137 50.4
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 2.2e-28 129.8 138 49.3
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 2.2e-28 129.8 142 53.5
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 2.8e-28 129.4 148 47.3
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 1.1e-27 127.5 134 53.0
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 2.4e-27 126.3 131 54.2
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 3.1e-27 125.9 139 51.8
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 4.1e-27 125.6 137 54.0
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 9.1e-27 124.4 118 56.8
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 9.1e-27 124.4 118 56.8
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 9.1e-27 124.4 140 47.9
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 1.6e-26 123.6 140 52.1
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 1.6e-26 123.6 90 65.6
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 2.6e-26 122.9 137 48.9
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 3.5e-26 122.5 107 56.1
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 3.5e-26 122.5 137 51.1
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.3e-25 120.6 86 64.0
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.7e-25 120.2 147 44.2
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 1.7e-25 120.2 104 51.9
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 2.9e-25 119.4 137 49.6
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 2.9e-25 119.4 137 49.6
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 2.9e-25 119.4 137 49.6
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 2.9e-25 119.4 138 51.4
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 5.0e-25 118.6 130 51.5
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 8.5e-25 117.9 132 51.5
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 1.9e-24 116.7 150 46.0
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 5.5e-24 115.2 137 48.2
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 5.5e-24 115.2 137 48.2
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 5.5e-24 115.2 101 58.4
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 9.4e-24 114.4 130 48.5
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 1.6e-23 113.6 64 82.8
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 2.1e-23 113.2 83 63.9
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 2.7e-23 112.8 159 46.5
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 2.7e-23 112.8 68 75.0
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 3.0e-22 109.4 62 77.4
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 6.7e-22 108.2 59 78.0
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 1.2e-21 107.5 84 60.7
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 1.5e-21 107.1 82 59.8
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.4e-19 99.8 82 56.1
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 2.7e-18 96.3 59 67.8
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 5.9e-18 95.1 49 79.6
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 2.7e-15 86.3 61 59.0
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 1.8e-14 83.6 78 46.2
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 3.0e-14 82.8 47 72.3
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 5.2e-14 82.0 39 89.7
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 2.6e-13 79.7 51 72.5
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 5.4e-11 72.0 95 44.2
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 5.9e-10 68.6 53 45.3
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 7.7e-10 68.2 70 42.9
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 9.5e-08 61.2 47 51.1
vmacro22872 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 1.0e-06 57.8 36 69.4
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.8e-06 57.0 50 42.0


User provided reference genes

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