Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 2.4e-96 355.5 184 100.0
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 1.1e-53 213.8 166 71.1
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 2.5e-53 212.6 167 71.9
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 4.3e-53 211.8 169 72.8
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 2.6e-50 202.6 166 68.7
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 9.9e-50 200.7 160 66.9
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.3e-49 200.3 149 76.5
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 8.4e-49 197.6 166 68.1
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 1.1e-48 197.2 167 67.7
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 2.4e-48 196.1 161 67.1
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 3.2e-48 195.7 166 67.5
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 4.2e-48 195.3 161 65.8
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 5.4e-48 194.9 163 68.1
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 4.6e-47 191.8 168 66.7
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 6.0e-47 191.4 161 65.8
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 7.9e-47 191.0 161 63.4
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.3e-46 190.3 168 64.9
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 2.3e-46 189.5 169 63.9
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 2.3e-46 189.5 173 65.9
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 3.9e-46 188.7 161 68.9
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 3.9e-46 188.7 167 66.5
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 6.7e-46 188.0 166 66.9
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 1.5e-45 186.8 205 56.6
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.9e-45 186.4 162 66.0
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.9e-45 186.4 169 63.3
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 1.9e-45 186.4 151 66.2
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 3.3e-45 185.7 162 64.8
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 3.3e-45 185.7 166 65.7
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 4.3e-45 185.3 167 67.7
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 1.3e-44 183.7 163 66.9
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.1e-44 183.0 167 67.7
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 2.1e-44 183.0 171 64.9
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 3.7e-44 182.2 166 65.1
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 4.8e-44 181.8 157 62.4
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 1.1e-43 180.6 165 63.6
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 1.1e-43 180.6 166 66.3
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 3.1e-43 179.1 171 63.2
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 4.0e-43 178.7 163 66.3
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 5.3e-43 178.3 167 65.3
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 3.4e-42 175.6 172 62.2
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 5.8e-42 174.9 200 55.5
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 7.6e-42 174.5 163 66.9
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 3.8e-41 172.2 161 66.5
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 6.5e-41 171.4 160 64.4
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 6.5e-41 171.4 170 63.5
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 6.5e-41 171.4 170 62.4
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 8.4e-41 171.0 169 60.9
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 8.4e-41 171.0 160 66.2
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 9.3e-40 167.5 171 60.2
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 9.3e-40 167.5 166 60.8
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 1.6e-39 166.8 162 63.0
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 2.7e-39 166.0 172 56.4
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 2.3e-38 162.9 184 58.7
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 3.0e-38 162.5 165 58.2
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 6.7e-38 161.4 104 80.8
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.1e-37 160.6 117 71.8
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 2.5e-37 159.5 160 61.9
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 2.5e-37 159.5 144 66.0
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.5e-37 159.5 192 54.7
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 3.3e-37 159.1 136 66.9
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 1.3e-36 157.1 171 56.7
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 2.8e-36 156.0 125 69.6
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 1.1e-35 154.1 146 63.7
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 4.1e-35 152.1 125 68.8
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 9.0e-35 151.0 102 77.5
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.2e-34 150.6 170 58.8
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 2.6e-34 149.4 163 55.8
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.4e-34 149.1 175 57.7
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 4.5e-34 148.7 164 55.5
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 4.5e-34 148.7 122 65.6
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 5.8e-34 148.3 171 57.9
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 1.0e-33 147.5 127 65.4
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 1.0e-33 147.5 127 65.4
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 1.0e-33 147.5 127 65.4
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.0e-33 147.5 173 55.5
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 1.0e-33 147.5 175 56.6
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 6.5e-33 144.8 126 65.1
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 8.4e-33 144.4 170 54.7
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.4e-32 143.7 182 53.8
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 1.4e-32 143.7 124 66.1
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 1.9e-32 143.3 160 53.8
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 4.2e-32 142.1 133 63.9
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 5.5e-32 141.7 174 53.4
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 9.3e-32 141.0 173 54.3
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 1.2e-31 140.6 131 63.4
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 2.7e-31 139.4 171 55.6
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 4.6e-31 138.7 135 61.5
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 6.1e-31 138.3 126 63.5
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 2.3e-30 136.3 176 53.4
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 2.3e-30 136.3 176 53.4
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 9.7e-29 131.0 152 54.6
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 3.7e-28 129.0 168 52.4
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 1.8e-27 126.7 150 51.3
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 5.3e-27 125.2 97 72.2
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 4.5e-26 122.1 78 78.2
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 5.0e-25 118.6 68 85.3
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 1.4e-24 117.1 80 76.2
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.4e-24 117.1 117 59.8
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 4.2e-24 115.5 125 59.2
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 7.9e-23 111.3 160 47.5
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 9.7e-21 104.4 119 51.3
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 2.2e-20 103.2 120 52.5
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.4e-19 99.8 68 76.5
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 2.0e-18 96.7 108 53.7
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 5.9e-18 95.1 122 47.5
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 1.0e-17 94.4 85 60.0
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.3e-17 94.0 68 75.0
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.3e-17 94.0 68 75.0
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 3.0e-14 82.8 76 59.2
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 1.3e-12 77.4 143 36.4
Duzib130G0001 Durio zibethinus HOM05D006899 ORTHO05D008566 6.3e-12 75.1 85 56.5
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.6e-10 69.7 98 44.9
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 7.7e-10 68.2 69 44.9
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 1.3e-09 67.4 114 43.0
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 6.1e-07 58.5 159 30.2
Psat2g016880 Pisum sativum HOM05D006899 ORTHO05D008566 1.8e-06 57.0 88 44.3


User provided reference genes

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