Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv09036 Davidia involucrata HOM05D000867 ORTHO05D035055 1.7e-119 432.6 207 100.0
Dinv24196 Davidia involucrata HOM05D000867 ORTHO05D000864 3.5e-59 232.3 239 52.7
CSS0001819 Camellia sinensis var. sinensis HOM05D000867 ORTHO05D000864 1.1e-49 200.7 238 48.3
Actinidia00264 Actinidia chinensis HOM05D000867 ORTHO05D000864 2.9e-42 176.0 231 46.3
Actinidia23992 Actinidia chinensis HOM05D000867 ORTHO05D000864 6.1e-40 168.3 233 44.6
Hma1.2p1_0704F.1_g206710 Hydrangea macrophylla HOM05D000867 ORTHO05D000864 7.8e-35 151.4 238 41.2
CiPaw.06G152800 Carya illinoinensis HOM05D000867 ORTHO05D000864 6.6e-34 148.3 218 42.2
Haze_10687 Corylus avellana HOM05D000867 ORTHO05D000864 8.6e-34 147.9 252 39.3
QL11p020619 Quercus lobata HOM05D000867 ORTHO05D000864 3.6e-32 142.5 248 37.5
Cfa005606 Carpinus fangiana HOM05D000867 ORTHO05D000864 1.1e-31 141.0 248 38.7
TAR625G1120 Trochodendron aralioides HOM05D000867 ORTHO05D000864 6.4e-29 131.7 242 38.4
TAR376G0184 Trochodendron aralioides HOM05D000867 ORTHO05D000864 1.1e-28 131.0 243 38.7
Oeu036420.1 Olea europaea HOM05D000867 ORTHO05D000864 7.0e-28 128.3 234 38.0
Lj9A353G64 Lonicera japonica HOM05D000867 ORTHO05D000864 1.7e-26 123.6 128 53.1
MSTRG.16579 Avicennia marina HOM05D000867 ORTHO05D000864 3.3e-25 119.4 261 34.1
Oeu007959.1 Olea europaea HOM05D000867 ORTHO05D000864 4.3e-25 119.0 230 37.0
CiPaw.05G036200 Carya illinoinensis HOM05D000867 ORTHO05D000864 2.3e-23 113.2 250 34.0
Cpa.g.sc42.65 Carica papaya HOM05D000867 ORTHO05D000864 4.0e-23 112.5 266 32.7
Duzib052G0574 Durio zibethinus HOM05D000867 ORTHO05D000864 8.9e-23 111.3 230 37.8
Duzib132G1073 Durio zibethinus HOM05D000867 ORTHO05D000864 8.9e-23 111.3 230 40.0
Cc02_g21610 Coffea canephora HOM05D000867 ORTHO05D000864 1.5e-22 110.5 249 34.9
Duzib248G0024 Durio zibethinus HOM05D000867 ORTHO05D000864 5.8e-22 108.6 226 37.2
Oeu059792.1 Olea europaea HOM05D000867 ORTHO05D000864 9.9e-22 107.8 236 34.7
arahy.Tifrunner.gnm1.ann1.BX6JSV Arachis hypogaea HOM05D000867 ORTHO05D000864 2.2e-21 106.7 257 33.5
Thecc.02G139300 Theobroma cacao HOM05D000867 ORTHO05D000864 1.9e-20 103.6 237 36.7
TAR628G1001 Trochodendron aralioides HOM05D000867 ORTHO05D000864 4.1e-20 102.4 204 38.7
VMungo0251G0704 Vigna mungo HOM05D000867 ORTHO05D000864 3.5e-19 99.4 253 35.6
arahy.Tifrunner.gnm1.ann1.5306M4 Arachis hypogaea HOM05D000867 ORTHO05D000864 6.0e-19 98.6 242 32.2
Phvul.002G208100 Phaseolus vulgaris HOM05D000867 ORTHO05D000864 6.0e-19 98.6 251 35.9
Nn1g05337 Nelumbo nucifera HOM05D000867 ORTHO05D000864 7.8e-19 98.2 245 35.9
Dinv44766 Davidia involucrata HOM05D000867 ORTHO05D000864 2.6e-14 83.2 205 33.2
SGA_v2.0_scaffold332G48963 Striga asiatica HOM05D000867 ORTHO05D000864 3.4e-14 82.8 248 32.3
SalBow6G4672 Salvia bowleyana HOM05D000867 ORTHO05D000864 8.4e-13 78.2 237 32.9
SalBow6G5193 Salvia bowleyana HOM05D000867 ORTHO05D000864 8.4e-13 78.2 237 32.9
Lj6g0013680 Lotus japonicus HOM05D000867 ORTHO05D000864 1.4e-12 77.4 225 31.1
Gohir.A01G015000 Gossypium hirsutum HOM05D000867 ORTHO05D000864 3.2e-12 76.3 205 33.2
Oeu000242.1 Olea europaea HOM05D000867 ORTHO05D000864 1.2e-11 74.3 235 30.6
Aqoxy6G00806 Aquilegia oxysepala HOM05D000867 ORTHO05D000864 2.7e-11 73.2 250 29.2
CSS0021744 Camellia sinensis var. sinensis HOM05D000867 ORTHO05D000864 7.8e-11 71.6 212 26.9
COL.COLO4_24966 Corchorus olitorius HOM05D000867 ORTHO05D000864 7.8e-11 71.6 230 33.9
Dinv13023 Davidia involucrata HOM05D000867 ORTHO05D000864 1.3e-10 70.9 207 30.9
Gorai.002G012800 Gossypium raimondii HOM05D000867 ORTHO05D000864 2.3e-10 70.1 217 31.8
SalBow5G4469 Salvia bowleyana HOM05D000867 ORTHO05D000864 2.3e-10 70.1 236 28.4
Gohir.D01G010700 Gossypium hirsutum HOM05D000867 ORTHO05D000864 3.0e-10 69.7 219 32.4
Glyma.05G118200 Glycine max HOM05D000867 ORTHO05D000864 8.7e-10 68.2 237 31.2
Atru.chr13.1204 Acer truncatum HOM05D000867 ORTHO05D000864 1.5e-09 67.4 230 29.6
TAR381G1180 Trochodendron aralioides HOM05D000867 ORTHO05D415421 2.5e-09 66.6 47 61.7
Hma1.2p1_0120F.1_g057340 Hydrangea macrophylla HOM05D000867 ORTHO05D000864 9.6e-09 64.7 207 28.5
Phvul.006G206800 Phaseolus vulgaris HOM05D000867 ORTHO05D000864 1.2e-08 64.3 240 29.6
VMungo0540G1668 Vigna mungo HOM05D000867 ORTHO05D000864 1.2e-08 64.3 240 28.8
Gorai.005G111100 Gossypium raimondii HOM05D000867 ORTHO05D000864 2.1e-08 63.5 221 30.3
Thecc.08G108200 Theobroma cacao HOM05D000867 ORTHO05D000864 2.1e-08 63.5 217 30.0
Lalb_Chr15g0090461 Lupinus albus HOM05D000867 ORTHO05D000864 4.7e-08 62.4 120 31.7
arahy.Tifrunner.gnm1.ann1.MRV38C Arachis hypogaea HOM05D000867 ORTHO05D000864 6.2e-08 62.0 229 31.9
Prupe.1G515100 Prunus persica HOM05D000867 ORTHO05D000864 6.2e-08 62.0 184 32.1
arahy.Tifrunner.gnm1.ann1.774JYD Arachis hypogaea HOM05D000867 ORTHO05D000864 2.4e-07 60.1 230 31.7
Lalb_Chr20g0123051 Lupinus albus HOM05D000867 ORTHO05D000864 4.0e-07 59.3 111 31.5
MD15G1367200 Malus domestica HOM05D000867 ORTHO05D000864 5.8e-06 55.5 127 32.3
Duzib116G0937 Durio zibethinus HOM05D000867 ORTHO05D000864 9.9e-06 54.7 218 28.9
SGA_v2.0_scaffold28G11868 Striga asiatica HOM05D000867 ORTHO05D035055 9.9e-06 54.7 88 39.8


User provided reference genes

Program Settings