Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 3.2e-40 167.9 82 100.0
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 2.7e-23 111.7 68 80.9
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 2.7e-23 111.7 68 77.9
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 1.1e-21 106.3 67 73.1
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 3.3e-21 104.8 68 70.6
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 3.3e-21 104.8 68 72.1
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 1.6e-20 102.4 67 74.6
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 6.2e-20 100.5 68 73.5
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 8.1e-20 100.1 68 70.6
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.1e-19 99.8 72 69.4
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.1e-19 99.8 67 73.1
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.4e-19 99.4 68 69.1
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.4e-19 99.4 68 69.1
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.4e-19 98.6 68 66.2
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 2.4e-19 98.6 68 67.6
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 4.0e-19 97.8 68 69.1
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 4.0e-19 97.8 68 70.6
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 5.3e-19 97.4 68 64.7
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 6.9e-19 97.1 68 72.1
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 6.9e-19 97.1 68 64.7
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 6.9e-19 97.1 68 64.7
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 9.0e-19 96.7 68 67.6
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 9.0e-19 96.7 67 67.2
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.0e-18 95.5 68 67.6
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 2.0e-18 95.5 68 66.2
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 2.0e-18 95.5 68 69.1
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 3.4e-18 94.7 68 64.7
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 4.5e-18 94.4 68 69.1
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 4.5e-18 94.4 68 63.2
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 1.0e-17 93.2 68 61.8
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 1.7e-17 92.4 67 65.7
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 2.2e-17 92.0 67 67.2
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 2.2e-17 92.0 68 61.8
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 2.9e-17 91.7 68 60.3
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 4.9e-17 90.9 68 60.3
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 6.5e-17 90.5 68 63.2
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 8.4e-17 90.1 68 57.4
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 8.4e-17 90.1 67 65.7
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 8.4e-17 90.1 67 62.7
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 1.1e-16 89.7 70 62.9
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 1.1e-16 89.7 69 62.3
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 1.4e-16 89.4 68 60.3
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 2.5e-16 88.6 64 65.6
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 7.1e-16 87.0 68 58.8
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 2.1e-15 85.5 64 59.4
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 2.1e-15 85.5 68 55.9
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 2.1e-15 85.5 68 50.0
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 2.7e-15 85.1 68 60.3
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 3.5e-15 84.7 68 60.3
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 7.9e-15 83.6 68 58.8
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 7.9e-15 83.6 68 60.3
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 1.0e-14 83.2 68 57.4
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 1.8e-14 82.4 68 55.9
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 3.9e-14 81.3 67 58.2
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 6.7e-14 80.5 68 54.4
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 8.7e-14 80.1 68 55.9
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 1.1e-13 79.7 68 52.9
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 1.5e-13 79.3 68 52.9
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 1.5e-13 79.3 68 57.4
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.9e-13 79.0 68 54.4
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 2.5e-13 78.6 78 53.8
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 3.3e-13 78.2 68 52.9
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 3.3e-13 78.2 68 52.9
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 3.3e-13 78.2 63 57.1
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 3.3e-13 78.2 63 60.3
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 2.1e-12 75.5 57 61.4
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 2.1e-12 75.5 67 53.7
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 2.1e-12 75.5 61 55.7
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.8e-12 75.1 67 53.7
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 2.8e-12 75.1 67 53.7
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 3.7e-12 74.7 67 53.7
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 6.2e-12 73.9 68 52.9
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 2.4e-11 72.0 68 42.6
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 3.1e-11 71.6 68 48.5
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 5.3e-11 70.9 66 54.5
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 9.0e-11 70.1 66 53.0
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 9.0e-11 70.1 66 53.0
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 1.2e-10 69.7 66 53.0
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 1.2e-10 69.7 66 53.0
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 1.2e-10 69.7 69 50.7
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 2.0e-10 68.9 68 45.6
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 2.6e-10 68.6 66 53.0
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 3.4e-10 68.2 66 51.5
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 4.5e-10 67.8 63 47.6
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 5.8e-10 67.4 66 51.5
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 1.0e-09 66.6 61 55.7
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 1.0e-09 66.6 66 51.5
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 5.0e-09 64.3 66 50.0
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.4e-08 62.8 68 42.6
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 2.5e-08 62.0 62 45.2
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 3.2e-08 61.6 66 47.0
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 7.1e-08 60.5 68 42.6
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 1.0e-06 56.6 39 66.7


User provided reference genes

Program Settings