Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08901 Davidia involucrata HOM05D007520 ORTHO05D009417 2.9e-35 151.4 76 100.0
CSS0021820 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.8e-29 130.2 83 77.1
CSS0032687 Camellia sinensis var. sinensis HOM05D007520 ORTHO05D009417 6.8e-29 130.2 83 77.1
Gorai.008G169800 Gossypium raimondii HOM05D007520 ORTHO05D009417 7.5e-28 126.7 73 83.6
GSVIVG01011595001 Vitis vinifera HOM05D007520 ORTHO05D009417 2.4e-26 121.7 76 77.6
Thecc.02G303900 Theobroma cacao HOM05D007520 ORTHO05D009417 4.1e-26 120.9 71 81.7
Migut.L00619 Erythranthe guttata HOM05D007520 ORTHO05D009417 9.2e-26 119.8 71 77.5
Duzib268G1867 Durio zibethinus HOM05D007520 ORTHO05D009417 1.6e-25 119.0 71 80.3
Prupe.1G338000 Prunus persica HOM05D007520 ORTHO05D009417 1.6e-25 119.0 72 76.4
ECA246G0416 Erigeron canadensis HOM05D007520 ORTHO05D009417 2.0e-25 118.6 73 76.7
Manes.17G089333 Manihot esculenta HOM05D007520 ORTHO05D009417 4.6e-25 117.5 73 82.2
TWI53G0076 Tripterygium wilfordii HOM05D007520 ORTHO05D009417 6.0e-25 117.1 71 78.9
CiPaw.06G058600 Carya illinoinensis HOM05D007520 ORTHO05D009417 1.3e-24 115.9 72 80.6
Medtr1g038820 Medicago truncatula HOM05D007520 ORTHO05D009417 2.3e-24 115.2 72 75.0
TPR.G35527 Trifolium pratense HOM05D007520 ORTHO05D009417 3.0e-24 114.8 72 73.6
CANSAT78G2519 Cannabis sativa HOM05D007520 ORTHO05D009417 5.0e-24 114.0 72 72.2
RcHm_v2.0_Chr4g0433681 Rosa chinensis HOM05D007520 ORTHO05D009417 8.6e-24 113.2 72 75.0
Lj2g0009613 Lotus japonicus HOM05D007520 ORTHO05D009417 1.1e-23 112.8 72 76.4
Nn4g24547 Nelumbo nucifera HOM05D007520 ORTHO05D009417 1.1e-23 112.8 70 80.0
Psat6g100600 Pisum sativum HOM05D007520 ORTHO05D009417 1.1e-23 112.8 72 72.2
Glyma.14G224300 Glycine max HOM05D007520 ORTHO05D009417 1.5e-23 112.5 72 73.6
FvH4_4g26110 Fragaria vesca HOM05D007520 ORTHO05D009417 1.9e-23 112.1 72 73.6
MD13G1015700 Malus domestica HOM05D007520 ORTHO05D009417 1.9e-23 112.1 72 75.0
HanXRQChr12g0379401 Helianthus annuus HOM05D007520 ORTHO05D009417 9.5e-23 109.8 73 68.5
Phvul.003G001900 Phaseolus vulgaris HOM05D007520 ORTHO05D009417 2.8e-22 108.2 72 72.2
Thhalv10005705m.g Eutrema salsugineum HOM05D007520 ORTHO05D009417 1.1e-21 106.3 68 75.0
FAN12G3032 Fragaria x ananassa HOM05D007520 ORTHO05D009417 3.1e-21 104.8 72 72.2
FAN12G3090 Fragaria x ananassa HOM05D007520 ORTHO05D009417 3.1e-21 104.8 72 72.2
THA.LOC104824117 Tarenaya hassleriana HOM05D007520 ORTHO05D009417 3.1e-21 104.8 68 72.1
MELO3C020056.2 Cucumis melo HOM05D007520 ORTHO05D009417 8.9e-21 103.2 70 71.4
PGR042G3173 Punica granatum HOM05D007520 ORTHO05D009417 2.0e-20 102.1 71 64.8
Nitab4.5_0004339g0060 Nicotiana tabacum HOM05D007520 ORTHO05D009417 3.4e-20 101.3 70 70.0
CARHR144480 Cardamine hirsuta HOM05D007520 ORTHO05D009417 7.5e-20 100.1 68 70.6
C07p32740 Brassica napus HOM05D007520 ORTHO05D009417 9.9e-20 99.8 68 69.1
BolC7t43791H Brassica oleracea HOM05D007520 ORTHO05D009417 9.9e-20 99.8 68 69.1
Eucgr.B02652 Eucalyptus grandis HOM05D007520 ORTHO05D009417 9.9e-20 99.8 72 63.9
Sp2g13330 Schrenkiella parvula HOM05D007520 ORTHO05D009417 9.9e-20 99.8 68 69.1
CsaV3_5G012990 Cucumis sativus L. HOM05D007520 ORTHO05D009417 1.3e-19 99.4 70 70.0
AT2G01905 Arabidopsis thaliana HOM05D007520 ORTHO05D009417 2.2e-19 98.6 73 63.0
PSO017G5472 Papaver somniferum HOM05D007520 ORTHO05D009417 2.9e-19 98.2 73 65.8
AL5G11020 Arabidopsis lyrata HOM05D007520 ORTHO05D009417 3.7e-19 97.8 73 63.0
SGA_v2.0_scaffold172G39028 Striga asiatica HOM05D007520 ORTHO05D009417 3.7e-19 97.8 71 64.8
Sed0012329 Sechium edule HOM05D007520 ORTHO05D009417 1.1e-18 96.3 70 67.1
Ciclev10016556m.g Citrus clementina HOM05D007520 ORTHO05D009417 1.4e-18 95.9 58 77.6
Sc15g0004470 Simmondsia chinensis HOM05D007520 ORTHO05D009417 1.4e-18 95.9 71 62.0
TAR374G0082 Trochodendron aralioides HOM05D000504 ORTHO05D000403 1.4e-18 95.9 57 82.5
Carub.0005s0090 Capsella rubella HOM05D007520 ORTHO05D009417 1.9e-18 95.5 67 67.2
CAN.G1812.4 Capsicum annuum HOM05D007520 ORTHO05D009417 1.9e-18 95.5 70 71.4
Nitab4.5_0010118g0020 Nicotiana tabacum HOM05D007520 ORTHO05D009417 1.9e-18 95.5 70 67.1
PGSC0003DMG400041336 Solanum tuberosum HOM05D001905 ORTHO05D001820 1.9e-18 95.5 70 67.1
A06p43940 Brassica napus HOM05D007520 ORTHO05D009417 3.2e-18 94.7 68 67.6
BraA06t27270Z Brassica rapa HOM05D007520 ORTHO05D009417 3.2e-18 94.7 68 67.6
Sopen04g032100 Solanum pennellii HOM05D007520 ORTHO05D009417 1.2e-17 92.8 70 65.7
Aqoxy5G01264 Aquilegia oxysepala HOM05D007520 ORTHO05D009417 6.0e-17 90.5 70 58.6
FAN17G2852 Fragaria x ananassa HOM05D007520 ORTHO05D009417 1.0e-16 89.7 96 52.1
PSO478G1043 Papaver somniferum HOM05D007520 ORTHO05D009417 2.3e-16 88.6 81 56.8
Solyc04g078500.1 Solanum lycopersicum HOM05D007520 ORTHO05D009417 3.0e-16 88.2 70 64.3
Hma1.2p1_0095F.1_g047520 Hydrangea macrophylla HOM05D007520 ORTHO05D009417 3.9e-16 87.8 45 91.1
Actinidia11793 Actinidia chinensis HOM05D007520 ORTHO05D009417 5.1e-16 87.4 45 91.1
HPP92_016407 Vanilla planifolia HOM05D007520 ORTHO05D009417 6.6e-16 87.0 68 57.4
VMungo0251G1805 Vigna mungo HOM05D007520 ORTHO05D009417 6.6e-16 87.0 72 62.5
Gohir.D12G157000 Gossypium hirsutum HOM05D007520 ORTHO05D009417 8.6e-16 86.7 48 81.2
Gohir.A12G153900 Gossypium hirsutum HOM05D007520 ORTHO05D009417 7.3e-15 83.6 48 77.1
CDE06G1244 Ceratophyllum demersum HOM05D007520 ORTHO05D009417 1.2e-14 82.8 69 62.3
COL.COLO4_27582 Corchorus olitorius HOM05D007520 ORTHO05D009417 1.2e-14 82.8 45 84.4
Aa31LG2G8010 Aethionema arabicum HOM05D007520 ORTHO05D009417 2.1e-14 82.0 47 80.9
QL03p039135 Quercus lobata HOM05D007520 ORTHO05D009417 2.1e-14 82.0 45 86.7
EL10Ac1g01972 Beta vulgaris HOM05D007520 ORTHO05D009417 4.7e-14 80.9 69 56.5
BcaC06g31264 Brassica carinata HOM05D007520 ORTHO05D009417 3.1e-13 78.2 47 74.5
ClCG11G001000 Citrullus lanatus HOM05D007520 ORTHO05D009417 3.1e-13 78.2 45 82.2
Ah.11g041100 Amaranthus hybridus HOM05D007520 ORTHO05D009417 4.0e-13 77.8 71 54.9
AUR62036879 Chenopodium quinoa HOM05D007520 ORTHO05D009417 2.0e-12 75.5 68 51.5
Rhsim09G0085600 Rhododendron simsii HOM05D007520 ORTHO05D009417 4.9e-11 70.9 75 52.0
AUR62032185 Chenopodium quinoa HOM05D007520 ORTHO05D009417 4.1e-10 67.8 69 47.8
Zm00001eb010100 Zea mays HOM05D007520 ORTHO05D009417 4.1e-10 67.8 45 64.4
arahy.Tifrunner.gnm1.ann1.RL07R4 Arachis hypogaea HOM05D007520 ORTHO05D009417 1.2e-09 66.2 48 68.8
AUR62026615 Chenopodium quinoa HOM05D007520 ORTHO05D009417 1.9e-07 58.9 69 44.9


User provided reference genes

Program Settings