Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 0.0e+00 1325.5 657 100.0
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 0.0e+00 1115.1 663 86.0
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 2.2e-301 1038.5 660 80.8
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.1e-287 993.0 660 77.1
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 1.7e-285 985.7 673 74.9
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.1e-279 966.5 673 74.3
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 1.2e-275 953.0 667 73.3
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 4.6e-275 951.0 666 74.2
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 3.0e-274 948.3 659 73.3
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 6.3e-272 940.6 660 73.3
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 9.0e-271 936.8 665 74.0
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 6.1e-267 924.1 661 72.2
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.3e-264 916.4 662 70.8
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 3.8e-261 904.8 661 71.9
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 2.7e-259 898.7 660 72.0
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 4.7e-259 897.9 661 71.0
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.8e-258 896.0 662 70.1
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 6.7e-258 894.0 666 70.6
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 3.3e-257 891.7 668 70.8
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 7.0e-255 884.0 666 69.7
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.0e-254 882.5 668 69.3
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 2.0e-254 882.5 664 70.2
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 5.9e-254 880.9 665 69.6
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 6.5e-253 877.5 658 68.7
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 6.5e-253 877.5 665 69.2
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 8.5e-253 877.1 593 76.1
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.2e-252 875.2 668 68.6
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 7.2e-252 874.0 676 68.5
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 3.6e-251 871.7 669 68.2
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 1.4e-250 869.8 659 68.9
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 4.0e-250 868.2 662 69.5
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 5.7e-249 864.4 658 67.5
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.3e-248 860.9 659 69.5
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.1e-247 858.6 669 68.3
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 2.0e-246 855.9 665 68.7
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 2.7e-246 855.5 577 74.5
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 5.9e-246 854.4 660 67.1
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 5.9e-246 854.4 669 68.2
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 1.3e-245 853.2 666 68.5
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 6.1e-243 844.3 658 66.4
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.0e-242 843.6 666 67.4
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 5.2e-242 841.3 660 66.1
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.3e-240 836.6 666 66.5
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 2.8e-240 835.5 658 66.4
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 5.5e-236 821.2 661 66.3
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 2.1e-235 819.3 642 66.8
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 6.1e-235 817.8 671 66.3
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 1.4e-234 816.6 657 64.8
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 6.8e-234 814.3 657 64.8
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 8.8e-234 813.9 672 66.1
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 1.2e-233 813.5 670 64.0
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 2.0e-233 812.8 659 65.7
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 3.4e-233 812.0 707 63.5
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.4e-231 805.8 660 64.5
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 4.1e-231 805.1 669 64.4
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 9.2e-231 803.9 660 64.4
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 9.2e-231 803.9 675 63.6
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.7e-230 802.4 664 63.9
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 7.8e-230 800.8 669 63.8
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 2.3e-229 799.3 657 64.1
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.6e-227 793.1 667 65.1
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.6e-227 793.1 661 62.6
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.6e-227 793.1 667 62.8
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 6.1e-227 791.2 661 63.4
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 1.0e-226 790.4 661 64.1
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.3e-226 789.3 671 64.5
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 4.0e-226 788.5 660 62.6
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 3.4e-225 785.4 662 61.9
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 4.4e-225 785.0 674 61.9
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 9.8e-225 783.9 675 62.5
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 1.8e-223 779.6 687 62.6
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 3.2e-223 778.9 677 62.2
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 2.7e-222 775.8 664 63.6
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 1.3e-221 773.5 670 63.7
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 1.7e-221 773.1 676 62.4
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 3.0e-221 772.3 676 62.3
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.9e-220 769.6 663 60.8
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 1.2e-219 766.9 663 62.3
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.6e-219 766.5 670 64.2
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 1.6e-219 766.5 664 61.1
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 2.1e-219 766.1 682 61.3
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 4.7e-219 765.0 668 61.4
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 1.4e-218 763.5 674 61.4
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 1.8e-218 763.1 499 76.8
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 3.1e-218 762.3 678 61.5
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 5.2e-218 761.5 665 62.6
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 1.5e-217 760.0 676 62.0
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 1.5e-217 760.0 678 61.2
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 2.0e-217 759.6 676 62.0
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 2.6e-217 759.2 664 61.4
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 4.4e-217 758.4 667 60.3
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 8.3e-216 754.2 663 59.9
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 1.4e-215 753.4 679 61.1
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 1.6e-214 750.0 678 60.3
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.9e-212 743.0 685 59.7
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 1.6e-211 740.0 693 59.0
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.6e-211 740.0 666 60.4
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 4.0e-210 735.3 674 60.2
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 5.2e-210 734.9 712 57.4
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 8.3e-208 727.6 677 59.7
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 1.2e-206 723.8 661 60.7
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 1.6e-206 723.4 664 59.2
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 5.6e-204 714.9 659 59.6
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 7.3e-204 714.5 681 56.4
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 7.3e-204 714.5 664 58.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 2.9e-200 702.6 686 57.3
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 9.2e-199 697.6 699 56.5
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.0e-197 694.1 695 55.7
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 2.3e-197 693.0 656 58.4
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 3.0e-197 692.6 696 56.2
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 1.5e-196 690.3 725 55.6
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 9.6e-196 687.6 599 62.1
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 9.9e-193 677.6 516 69.6
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 1.1e-191 674.1 645 58.0
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 2.1e-190 669.8 683 55.2
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 8.7e-189 664.5 665 56.7
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.1e-188 664.1 644 57.8
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 2.0e-185 653.3 664 54.7
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.4e-178 629.8 643 56.0
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 3.4e-177 625.9 671 54.7
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.4e-175 620.5 677 52.0
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.5e-172 610.5 641 54.4
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 1.6e-171 607.1 508 64.2
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 4.5e-169 599.0 679 51.4
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 1.7e-168 597.0 636 55.5
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 3.8e-168 595.9 649 52.4
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 1.2e-166 590.9 511 63.4
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.2e-161 574.3 581 56.1
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 7.4e-156 555.1 549 57.9
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 5.9e-153 545.4 500 61.2
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.3e-152 544.3 680 48.5
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 8.5e-152 541.6 670 49.3
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 9.4e-151 538.1 532 57.0
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.7e-139 500.7 440 65.0
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.0e-136 491.5 437 61.3
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 2.6e-132 476.9 463 59.6
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 2.2e-128 463.8 488 55.1
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 3.6e-126 456.4 655 45.6
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.0e-121 440.7 594 45.5
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.9e-121 439.1 583 46.3
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 7.2e-119 432.2 694 42.1
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 2.7e-113 413.7 703 39.3
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 3.4e-108 396.7 701 39.7
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 7.0e-106 389.0 336 63.1
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 9.2e-106 388.7 372 59.9
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.0e-105 387.5 571 45.0
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 1.5e-103 381.3 264 78.4
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 3.6e-102 376.7 278 63.7
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 4.9e-99 366.3 405 48.6
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.6e-96 355.9 286 65.7
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 9.5e-95 352.1 796 34.4
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 5.2e-93 346.3 706 37.5
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 7.8e-81 305.8 408 46.3
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.3e-79 300.1 335 51.3
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 6.4e-75 286.2 259 64.1
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 3.5e-73 280.4 297 48.1
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 9.6e-71 272.3 205 65.4
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 2.9e-67 260.8 683 33.4
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 8.7e-64 249.2 612 33.8
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 4.2e-50 203.8 231 55.0
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 1.0e-43 182.6 717 27.2
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 1.7e-38 165.2 245 44.1
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 8.2e-38 162.9 165 53.3
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 1.3e-30 139.0 163 53.4
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 1.2e-28 132.5 130 53.8
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 4.7e-25 120.6 79 73.4
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.4e-21 109.0 106 50.9
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 9.1e-21 106.3 104 56.7
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 5.9e-20 103.6 128 49.2
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 8.5e-19 99.8 61 83.6
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 1.1e-18 99.4 86 59.3
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 7.2e-18 96.7 80 65.0
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 3.6e-17 94.4 68 66.2
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 6.1e-17 93.6 79 69.6
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 8.0e-17 93.2 133 42.9
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.3e-16 91.7 112 48.2
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.8e-14 84.0 88 52.3
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 1.8e-13 82.0 66 54.5
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 4.1e-13 80.9 57 61.4
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 5.3e-13 80.5 97 56.7
Dinv01749 Davidia involucrata HOM05D003691 ORTHO05D004288 1.2e-12 79.3 47 80.9
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 2.7e-12 78.2 50 66.0
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 3.5e-12 77.8 90 48.9
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 4.5e-12 77.4 51 78.4
Dinv18681 Davidia involucrata HOM05D003691 ORTHO05D004288 1.3e-11 75.9 48 75.0
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-10 72.4 68 58.8
Cre13.g589300 Chlamydomonas reinhardtii HOM05D003691 ORTHO05D004288 9.8e-07 59.7 189 22.8
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 2.8e-06 58.2 46 56.5


User provided reference genes

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