Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 4.8e-236 821.6 747 100.0
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.3e-137 493.8 736 60.1
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.8e-113 414.5 738 65.0
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 4.4e-112 409.8 733 65.8
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 1.7e-111 407.9 739 60.8
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 7.0e-110 402.5 728 56.0
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 5.5e-107 392.9 731 66.1
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.2e-104 385.2 737 61.7
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 3.7e-103 380.2 731 53.6
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-102 378.6 735 53.7
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 4.1e-102 376.7 733 60.2
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.5e-101 373.2 730 55.9
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 4.5e-101 373.2 736 54.5
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.7e-100 371.3 733 67.3
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 2.9e-100 370.5 731 58.0
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.9e-99 367.9 732 59.7
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 7.2e-99 365.9 736 53.7
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.2e-98 365.2 738 51.9
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.0e-97 362.1 737 66.5
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.3e-97 360.9 731 57.9
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 3.4e-96 357.1 731 55.0
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 2.8e-95 354.0 730 61.4
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 4.9e-95 353.2 736 64.5
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 6.3e-95 352.8 731 53.6
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.2e-94 350.5 733 53.6
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.3e-92 345.1 727 55.6
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.9e-91 341.3 722 63.7
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 9.5e-91 339.0 740 63.5
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.1e-90 337.8 727 65.1
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 2.8e-90 337.4 734 54.8
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 3.6e-90 337.0 733 63.6
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 2.3e-89 334.3 731 57.6
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.2e-88 332.0 732 54.9
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 7.5e-88 329.3 739 56.0
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 9.8e-88 328.9 736 56.8
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 5.4e-86 323.2 724 53.5
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 2.0e-85 321.2 686 63.6
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 4.6e-85 320.1 737 59.2
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 8.6e-84 315.8 736 50.0
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.5e-83 315.1 740 61.4
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 4.3e-83 313.5 731 61.7
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 6.8e-81 306.2 732 65.4
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.6e-80 304.3 738 55.7
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.3e-79 302.0 732 51.4
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 5.4e-78 296.6 739 53.0
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 7.8e-77 292.7 731 51.2
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.3e-76 291.2 739 58.3
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 5.1e-76 290.0 733 51.2
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 6.6e-76 289.7 732 49.3
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 6.6e-76 289.7 726 57.6
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.2e-74 285.4 685 61.3
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.6e-74 285.0 725 54.5
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 3.6e-74 283.9 739 50.5
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 4.7e-74 283.5 732 63.1
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 2.2e-71 274.6 729 54.6
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 4.1e-70 270.4 740 51.5
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 1.0e-68 265.8 731 53.5
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.0e-68 265.8 732 50.5
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.7e-68 265.0 728 53.3
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.5e-67 261.9 738 50.7
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 2.8e-66 257.7 730 58.1
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 3.6e-66 257.3 732 49.9
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.8e-65 255.0 733 47.7
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 1.8e-65 255.0 526 61.4
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 4.0e-65 253.8 728 52.7
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 8.9e-65 252.7 736 58.6
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 2.6e-64 251.1 735 49.8
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 1.3e-63 248.8 728 54.1
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.2e-63 248.1 733 54.0
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 8.4e-63 246.1 729 56.8
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 3.2e-62 244.2 724 58.8
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 1.0e-60 239.2 729 52.1
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.0e-60 239.2 488 58.0
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.6e-58 231.9 733 49.8
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 2.1e-58 231.5 740 58.5
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 1.1e-57 229.2 724 51.2
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.6e-56 224.6 724 51.5
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 2.2e-55 221.5 732 49.2
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 9.3e-54 216.1 734 48.2
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 9.3e-54 216.1 739 55.3
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 2.1e-53 214.9 486 47.7
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 2.1e-53 214.9 486 47.7
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 4.3e-51 207.2 743 47.6
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 9.6e-51 206.1 735 49.9
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 2.8e-50 204.5 480 47.5
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 8.1e-50 203.0 462 46.1
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 5.3e-49 200.3 729 50.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.2e-48 199.1 745 45.9
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 8.4e-47 193.0 736 46.5
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 3.5e-45 187.6 727 48.7
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 6.7e-44 183.3 699 53.2
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 7.4e-43 179.9 230 66.1
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 4.9e-39 167.2 199 67.3
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.2e-37 162.5 744 46.1
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.0e-36 159.5 397 45.6
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 8.2e-34 149.8 126 69.8
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.2e-32 146.0 450 42.2
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.0e-31 142.9 736 50.1
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 7.1e-30 136.7 734 42.9
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.6e-26 125.6 724 46.0
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 3.8e-23 114.4 725 44.8
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 1.6e-21 109.0 196 37.8
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.2e-18 98.6 537 40.6
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 4.8e-18 97.4 112 51.8
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-17 96.3 301 32.2
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.8e-17 95.5 299 57.2
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 3.1e-17 94.7 457 28.9
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.3e-17 94.0 90 60.0
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 3.2e-14 84.7 707 39.6
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-13 82.8 95 55.8
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 3.6e-13 81.3 88 59.1
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 6.7e-12 77.0 101 44.6
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 3.1e-09 68.2 106 48.1
BcaC05g26857 Brassica carinata HOM05D002095 ORTHO05D002058 2.2e-07 62.0 65 49.2


User provided reference genes

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