Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08595 Davidia involucrata HOM05D010745 ORTHO05D013866 1.9e-101 372.5 187 100.0
Dinv08596 Davidia involucrata HOM05D010745 ORTHO05D001508 4.1e-75 285.0 198 76.3
Sed0010563 Sechium edule HOM05D001667 ORTHO05D001508 1.6e-18 97.1 143 42.7
Sed0015032 Sechium edule HOM05D001667 ORTHO05D001508 1.1e-16 90.9 133 44.4
CsaV3_6G004370 Cucumis sativus L. HOM05D001667 ORTHO05D001508 9.5e-16 87.8 137 46.7
CiPaw.13G042700 Carya illinoinensis HOM05D001667 ORTHO05D001508 1.2e-15 87.4 149 39.6
MELO3C019908.2 Cucumis melo HOM05D001667 ORTHO05D001508 2.1e-15 86.7 194 37.1
Sabra10G0188900 Salix brachista HOM05D001667 ORTHO05D001508 8.1e-15 84.7 108 47.2
ClCG08G008390 Citrullus lanatus HOM05D001667 ORTHO05D001508 2.3e-14 83.2 194 36.6
Potri.010G241400 Populus trichocarpa HOM05D001667 ORTHO05D001508 8.9e-14 81.3 108 45.4
QL04p047013 Quercus lobata HOM05D001667 ORTHO05D001508 1.2e-13 80.9 202 33.7
Nn6g34775 Nelumbo nucifera HOM05D001667 ORTHO05D001508 2.0e-13 80.1 128 43.0
Gohir.A13G009650 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.7e-12 77.0 172 35.5
Nn2g14254 Nelumbo nucifera HOM05D001590 ORTHO05D001508 4.9e-12 75.5 113 39.8
Gohir.D13G010450 Gossypium hirsutum HOM05D010745 ORTHO05D013866 6.4e-12 75.1 176 33.5
Gorai.013G011100 Gossypium raimondii HOM05D010745 ORTHO05D013866 6.4e-12 75.1 176 33.5
Thecc.10G115400 Theobroma cacao HOM05D010745 ORTHO05D013866 8.4e-12 74.7 129 38.8
TAR636G2183 Trochodendron aralioides HOM05D001667 ORTHO05D001508 1.9e-11 73.6 118 38.1
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 5.4e-11 72.0 140 37.1
TAR633G2309 Trochodendron aralioides HOM05D001667 ORTHO05D001508 5.4e-11 72.0 120 38.3
TAR623G1308 Trochodendron aralioides HOM05D001667 ORTHO05D001508 3.5e-10 69.3 109 41.3
Manes.07G085401 Manihot esculenta HOM05D015231 ORTHO05D001508 6.0e-10 68.6 143 36.4
Oeu048851.1 Olea europaea HOM05D001667 ORTHO05D001508 1.3e-09 67.4 108 39.8
QL03p057079 Quercus lobata HOM05D001667 ORTHO05D001508 3.0e-09 66.2 109 39.4
PSO801G0813 Papaver somniferum HOM05D001667 ORTHO05D001508 3.9e-09 65.9 116 37.1
Sc09g0005150 Simmondsia chinensis HOM05D015231 ORTHO05D001508 5.1e-09 65.5 147 31.3
QL01p011687 Quercus lobata HOM05D001667 ORTHO05D001508 1.1e-08 64.3 109 37.6
Haze_19672 Corylus avellana HOM05D001667 ORTHO05D001508 2.5e-08 63.2 109 39.4
MBI17_g16778_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 2.5e-08 63.2 104 41.3
Potri.009G161400 Populus trichocarpa HOM05D001667 ORTHO05D001508 2.5e-08 63.2 107 40.2
ECA238G0917 Erigeron canadensis HOM05D001667 ORTHO05D001508 4.3e-08 62.4 112 37.5
Manes.08G030700 Manihot esculenta HOM05D001667 ORTHO05D001508 4.3e-08 62.4 102 40.2
Lalb_Chr02g0154691 Lupinus albus HOM05D001667 ORTHO05D001508 5.6e-08 62.0 99 41.4
Thecc.09G277000 Theobroma cacao HOM05D001667 ORTHO05D001508 5.6e-08 62.0 108 37.0
Eucgr.G02682 Eucalyptus grandis HOM05D010745 ORTHO05D013866 7.3e-08 61.6 101 38.6
Aqoxy4G02696 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 9.6e-08 61.2 143 35.7
Cfa016662 Carpinus fangiana HOM05D001667 ORTHO05D001508 9.6e-08 61.2 109 38.5
Haze_23335 Corylus avellana HOM05D001667 ORTHO05D001508 9.6e-08 61.2 97 40.2
Gohir.D13G010300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 9.6e-08 61.2 172 31.4
Gorai.013G011000 Gossypium raimondii HOM05D010745 ORTHO05D013866 9.6e-08 61.2 172 31.4
Sabra06G0158900 Salix brachista HOM05D001667 ORTHO05D001508 9.6e-08 61.2 101 39.6
VMungo0720G0220 Vigna mungo HOM05D025486 ORTHO05D001508 9.6e-08 61.2 125 35.2
Dinv31738 Davidia involucrata HOM05D001667 ORTHO05D001508 1.2e-07 60.8 125 35.2
Gohir.A13G009600 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.2e-07 60.8 172 31.4
Potri.016G073400 Populus trichocarpa HOM05D001667 ORTHO05D001508 1.2e-07 60.8 111 38.7
TWI63G1676 Tripterygium wilfordii HOM05D010745 ORTHO05D001508 1.2e-07 60.8 116 36.2
Atru.chr8.1412 Acer truncatum HOM05D001667 ORTHO05D001508 1.6e-07 60.5 108 35.2
Potri.006G206000 Populus trichocarpa HOM05D001667 ORTHO05D001508 1.6e-07 60.5 106 38.7
CiPaw.09G018100 Carya illinoinensis HOM05D001667 ORTHO05D001508 2.1e-07 60.1 106 36.8
Rhsim03G0096800 Rhododendron simsii HOM05D015231 ORTHO05D019762 2.1e-07 60.1 166 28.3
MSTRG.12379 Avicennia marina HOM05D001667 ORTHO05D001508 2.8e-07 59.7 109 34.9
ClCG04G010320 Citrullus lanatus HOM05D001667 ORTHO05D001508 2.8e-07 59.7 100 39.0
Duzib150G0725 Durio zibethinus HOM05D001667 ORTHO05D001508 2.8e-07 59.7 109 38.5
MBI01_g34424_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 2.8e-07 59.7 111 38.7
Rhsim03G0067600 Rhododendron simsii HOM05D001667 ORTHO05D001508 2.8e-07 59.7 94 39.4
Sabra16G0076200 Salix brachista HOM05D001667 ORTHO05D001508 2.8e-07 59.7 94 40.4
Oeu009064.1 Olea europaea HOM05D001667 ORTHO05D001508 3.6e-07 59.3 109 33.0
Dinv21143 Davidia involucrata HOM05D001667 ORTHO05D001508 4.7e-07 58.9 118 39.0
Glyma.20G008100 Glycine max HOM05D001667 ORTHO05D001508 4.7e-07 58.9 125 34.4
FAN05G3938 Fragaria x ananassa HOM05D001667 ORTHO05D001508 6.2e-07 58.5 108 38.0
CSS0036703 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 8.1e-07 58.2 120 34.2
CSS0040873 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 8.1e-07 58.2 120 34.2
MD12G1033200 Malus domestica HOM05D001667 ORTHO05D001508 8.1e-07 58.2 110 39.1
SHI27881 Sapria himalayana HOM05D001667 ORTHO05D001508 8.1e-07 58.2 108 38.0
arahy.Tifrunner.gnm1.ann1.S45JQJ Arachis hypogaea HOM05D015231 ORTHO05D019762 1.1e-06 57.8 59 49.2
Gohir.A09G097500 Gossypium hirsutum HOM05D001667 ORTHO05D001508 1.1e-06 57.8 113 37.2
HanXRQChr05g0130531 Helianthus annuus HOM05D001667 ORTHO05D001508 1.1e-06 57.8 109 36.7
Oeu038096.1 Olea europaea HOM05D001667 ORTHO05D001508 1.1e-06 57.8 120 35.0
Hund18788 Selenicereus undatus HOM05D001667 ORTHO05D001508 1.1e-06 57.8 97 38.1
FvH4_6g19800 Fragaria vesca HOM05D001667 ORTHO05D001508 1.4e-06 57.4 108 37.0
FAN02G0800 Fragaria x ananassa HOM05D001667 ORTHO05D001508 1.4e-06 57.4 108 37.0
FAN05G2851 Fragaria x ananassa HOM05D001667 ORTHO05D001508 1.4e-06 57.4 108 37.0
Gohir.A05G299300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.4e-06 57.4 167 29.3
Gohir.D13G010666 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.4e-06 57.4 160 31.9
Hma1.2p1_0064F.1_g034920 Hydrangea macrophylla HOM05D001667 ORTHO05D001508 1.4e-06 57.4 99 37.4
CiPaw.10G014800 Carya illinoinensis HOM05D001667 ORTHO05D001508 1.8e-06 57.0 102 36.3
FAN14G5362 Fragaria x ananassa HOM05D001667 ORTHO05D001508 1.8e-06 57.0 108 37.0
Phvul.007G024000 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 1.8e-06 57.0 111 32.4
COL.COLO4_22643 Corchorus olitorius HOM05D001667 ORTHO05D001508 2.4e-06 56.6 109 37.6
Eucgr.A02613 Eucalyptus grandis HOM05D001667 ORTHO05D001508 2.4e-06 56.6 109 33.9
Gohir.D13G010250 Gossypium hirsutum HOM05D010745 ORTHO05D013866 2.4e-06 56.6 166 30.1
PGSC0003DMG400016381 Solanum tuberosum HOM05D001667 ORTHO05D001508 2.4e-06 56.6 83 39.8
arahy.Tifrunner.gnm1.ann1.RWL9VQ Arachis hypogaea HOM05D015231 ORTHO05D019762 3.1e-06 56.2 45 53.3
CsaV3_6G040940 Cucumis sativus L. HOM05D001667 ORTHO05D001508 3.1e-06 56.2 100 38.0
Gohir.A13G009750 Gossypium hirsutum HOM05D010745 ORTHO05D013866 3.1e-06 56.2 164 31.7
Gorai.013G011400 Gossypium raimondii HOM05D010745 ORTHO05D013866 3.1e-06 56.2 160 31.9
QL07p037582 Quercus lobata HOM05D001667 ORTHO05D001508 3.1e-06 56.2 109 34.9
THA.LOC104826812 Tarenaya hassleriana HOM05D001667 ORTHO05D001508 3.1e-06 56.2 102 36.3
Manes.09G049500 Manihot esculenta HOM05D001667 ORTHO05D001508 4.0e-06 55.8 99 39.4
Nn6g34732 Nelumbo nucifera HOM05D001667 ORTHO05D001508 4.0e-06 55.8 94 39.4
RcHm_v2.0_Chr3g0475171 Rosa chinensis HOM05D001667 ORTHO05D001508 4.0e-06 55.8 109 36.7
Ciclev10017988m.g Citrus clementina HOM05D001667 ORTHO05D001508 5.2e-06 55.5 98 38.8
SGA_v2.0_scaffold7G03988 Striga asiatica HOM05D001667 ORTHO05D001508 5.2e-06 55.5 99 34.3
FAN09G1589 Fragaria x ananassa HOM05D001667 ORTHO05D001508 6.8e-06 55.1 108 35.2
TWI79G0041 Tripterygium wilfordii HOM05D001667 ORTHO05D001508 6.8e-06 55.1 110 37.3
Glyma.20G112300 Glycine max HOM05D025486 ORTHO05D001508 8.9e-06 54.7 107 34.6
Lj1g0028219 Lotus japonicus HOM05D001667 ORTHO05D001508 8.9e-06 54.7 110 38.2
Phvul.007G023900 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 8.9e-06 54.7 111 31.5
Potri.004G200300 Populus trichocarpa HOM05D001667 ORTHO05D001508 8.9e-06 54.7 111 36.9


User provided reference genes

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