Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08577 Davidia involucrata HOM05D001917 ORTHO05D010068 1.6e-79 299.3 145 100.0
Dinv08583 Davidia involucrata HOM05D001917 ORTHO05D010068 7.6e-53 210.7 224 55.4
Actinidia34061 Actinidia chinensis HOM05D001917 ORTHO05D010068 1.9e-35 152.9 224 42.9
Potri.008G018400 Populus trichocarpa HOM05D001917 ORTHO05D010068 1.6e-34 149.8 108 67.6
CSS0002594 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 1.3e-33 146.7 213 42.7
GSVIVG01034617001 Vitis vinifera HOM05D001917 ORTHO05D010068 8.7e-33 144.1 225 39.6
Cc02_g09360 Coffea canephora HOM05D001917 ORTHO05D010068 5.6e-32 141.4 100 69.0
Potri.010G242800 Populus trichocarpa HOM05D001917 ORTHO05D010068 1.6e-31 139.8 108 64.8
Oeu009250.1 Olea europaea HOM05D001917 ORTHO05D010068 3.7e-31 138.7 100 68.0
PGSC0003DMG400001999 Solanum tuberosum HOM05D001917 ORTHO05D010068 6.2e-31 137.9 224 38.4
Atru.chr12.1073 Acer truncatum HOM05D001917 ORTHO05D010068 2.4e-30 136.0 100 68.0
Oeu033274.1 Olea europaea HOM05D001917 ORTHO05D010068 3.1e-30 135.6 100 66.0
CAN.G143.42 Capsicum annuum HOM05D001917 ORTHO05D010068 4.0e-30 135.2 224 37.9
Solyc11g006490.2 Solanum lycopersicum HOM05D001917 ORTHO05D010068 4.0e-30 135.2 224 37.9
Sopen11g002380 Solanum pennellii HOM05D001917 ORTHO05D010068 4.0e-30 135.2 224 37.9
Hma1.2p1_0926F.1_g237550 Hydrangea macrophylla HOM05D001917 ORTHO05D010068 1.5e-29 133.3 216 42.1
Sabra10G0189800 Salix brachista HOM05D001917 ORTHO05D010068 2.0e-29 132.9 109 64.2
Nitab4.5_0009933g0010 Nicotiana tabacum HOM05D001917 ORTHO05D010068 1.3e-28 130.2 226 38.5
Eucgr.J00290 Eucalyptus grandis HOM05D001917 ORTHO05D010068 2.9e-28 129.0 108 61.1
TAR636G1510 Trochodendron aralioides HOM05D001917 ORTHO05D010068 2.9e-28 129.0 109 63.3
MSTRG.9031 Avicennia marina HOM05D001917 ORTHO05D010068 6.4e-28 127.9 100 61.0
Peaxi162Scf00120g01525 Petunia axillaris HOM05D001917 ORTHO05D010068 1.1e-27 127.1 100 64.0
Cfa010522 Carpinus fangiana HOM05D001917 ORTHO05D010068 7.1e-27 124.4 100 66.0
Prupe.2G072200 Prunus persica HOM05D001917 ORTHO05D010068 7.1e-27 124.4 129 55.0
PGR044G0163 Punica granatum HOM05D001917 ORTHO05D010068 2.7e-26 122.5 110 61.8
Migut.F00844 Erythranthe guttata HOM05D001917 ORTHO05D010068 7.9e-26 120.9 108 56.5
CiPaw.13G043900 Carya illinoinensis HOM05D001917 ORTHO05D010068 5.1e-25 118.2 100 64.0
Rhsim03G0096000 Rhododendron simsii HOM05D001917 ORTHO05D010068 5.1e-25 118.2 128 53.1
QL04p047945 Quercus lobata HOM05D001917 ORTHO05D010068 4.3e-24 115.2 135 49.6
Sabra08G0012000 Salix brachista HOM05D001917 ORTHO05D010068 9.6e-24 114.0 102 57.8
Nn6g34689 Nelumbo nucifera HOM05D001917 ORTHO05D010068 1.6e-23 113.2 100 59.0
CANSAT56G3891 Cannabis sativa HOM05D001917 ORTHO05D010068 8.2e-23 110.9 108 52.8
Ciclev10016047m.g Citrus clementina HOM05D001917 ORTHO05D010068 9.0e-22 107.5 216 35.2
vmacro07272 Vaccinium macrocarpon HOM05D001917 ORTHO05D010068 4.5e-21 105.1 153 43.8
AUR62034488 Chenopodium quinoa HOM05D001917 ORTHO05D010068 2.2e-20 102.8 108 50.0
Lj2A35T44 Lonicera japonica HOM05D001917 ORTHO05D010068 3.8e-20 102.1 131 48.9
HanXRQChr02g0053591 Helianthus annuus HOM05D001917 ORTHO05D010068 6.5e-20 101.3 102 54.9
AUR62034166 Chenopodium quinoa HOM05D001917 ORTHO05D010068 8.4e-20 100.9 108 49.1
Hund22265 Selenicereus undatus HOM05D001917 ORTHO05D010068 1.1e-19 100.5 108 49.1
Hund06808 Selenicereus undatus HOM05D001917 ORTHO05D010068 2.5e-19 99.4 108 50.0
Aa31LG11G5870 Aethionema arabicum HOM05D001917 ORTHO05D010068 3.2e-19 99.0 100 53.0
CSS0044781 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 1.2e-18 97.1 174 36.2
Nitab4.5_0001781g0130 Nicotiana tabacum HOM05D001917 ORTHO05D010068 1.6e-18 96.7 222 32.0
AT5G04840 Arabidopsis thaliana HOM05D001917 ORTHO05D010068 2.1e-18 96.3 108 50.9
ECA238G0804 Erigeron canadensis HOM05D001917 ORTHO05D010068 7.9e-18 94.4 92 56.5
SalBow3G3254 Salvia bowleyana HOM05D001917 ORTHO05D010068 1.0e-17 94.0 96 55.2
Sc09g0005080 Simmondsia chinensis HOM05D001917 ORTHO05D010068 1.3e-17 93.6 108 47.2
Lsat_1_v5_gn_2_105921 Lactuca sativa HOM05D001917 ORTHO05D010068 3.9e-17 92.0 101 55.4
ClCG05G021960 Citrullus lanatus HOM05D001917 ORTHO05D010068 8.7e-17 90.9 114 45.6
Ah.04g162550 Amaranthus hybridus HOM05D001917 ORTHO05D010068 1.5e-16 90.1 100 49.0
Carub.0006s0372 Capsella rubella HOM05D001917 ORTHO05D010068 1.5e-16 90.1 100 53.0
Thhalv10014187m.g Eutrema salsugineum HOM05D001917 ORTHO05D010068 1.9e-16 89.7 108 47.2
Sed0005533 Sechium edule HOM05D001917 ORTHO05D010068 2.5e-16 89.4 111 47.7
THA.LOC104816474 Tarenaya hassleriana HOM05D001917 ORTHO05D010068 3.3e-16 89.0 108 45.4
Zm00001eb181550 Zea mays HOM05D001917 ORTHO05D010068 9.7e-16 87.4 108 44.4
CsaV3_5G035190 Cucumis sativus L. HOM05D001917 ORTHO05D010068 1.3e-15 87.0 114 44.7
AL6G14500 Arabidopsis lyrata HOM05D001917 ORTHO05D010068 1.6e-15 86.7 108 50.0
MELO3C012332.2 Cucumis melo HOM05D001917 ORTHO05D010068 1.6e-15 86.7 114 44.7
Haze_03462 Corylus avellana HOM05D001917 ORTHO05D010068 4.8e-15 85.1 170 36.5
Zm00001eb243050 Zea mays HOM05D001917 ORTHO05D010068 6.3e-15 84.7 108 44.4
Sp6g37990 Schrenkiella parvula HOM05D001917 ORTHO05D010068 2.4e-14 82.8 108 44.4
A10p31370 Brassica napus HOM05D001917 ORTHO05D010068 6.9e-14 81.3 100 49.0
BraA10t45183Z Brassica rapa HOM05D001917 ORTHO05D010068 6.9e-14 81.3 100 49.0
CARHR208440 Cardamine hirsuta HOM05D001917 ORTHO05D010068 6.9e-14 81.3 108 46.3
CDE08G1625 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 9.0e-14 80.9 100 46.0
BolC9t59949H Brassica oleracea HOM05D001917 ORTHO05D010068 3.4e-13 79.0 100 48.0
BcaC06g32191 Brassica carinata HOM05D001917 ORTHO05D010068 4.5e-13 78.6 100 47.0
Os02g0538900 Oryza sativa ssp. japonica HOM05D001917 ORTHO05D010068 7.7e-13 77.8 102 44.1
C09p72040 Brassica napus HOM05D001917 ORTHO05D010068 2.2e-12 76.3 100 47.0
HPP92_013376 Vanilla planifolia HOM05D001917 ORTHO05D010068 5.0e-12 75.1 101 46.5
CDE06G0681 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 8.5e-12 74.3 100 46.0
ATR0772G184 Amborella trichopoda HOM05D001917 ORTHO05D010068 5.5e-11 71.6 100 45.0
Thecc.10G117300 Theobroma cacao HOM05D001917 ORTHO05D010068 2.1e-10 69.7 100 45.0
Rhsim03G0095000 Rhododendron simsii HOM05D001917 ORTHO05D010068 4.3e-08 62.0 42 64.3


User provided reference genes

Program Settings