Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08561 Davidia involucrata HOM05D003331 ORTHO05D003264 7.4e-121 437.2 215 100.0
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 1.4e-34 150.6 168 58.3
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 7.8e-30 134.8 183 52.5
CiPaw.08G127600 Carya illinoinensis HOM05D003331 ORTHO05D003264 2.3e-29 133.3 177 52.5
Hma1.2p1_0561F.1_g178920 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 2.3e-29 133.3 171 55.0
Cfa007016 Carpinus fangiana HOM05D003331 ORTHO05D003264 8.6e-29 131.3 179 53.6
Cc07_g11170 Coffea canephora HOM05D003331 ORTHO05D003264 2.8e-27 126.3 168 50.6
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 2.4e-26 123.2 165 51.5
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 2.4e-26 123.2 167 56.3
Manes.02G109000 Manihot esculenta HOM05D003331 ORTHO05D003264 4.0e-26 122.5 180 51.7
Dinv40128 Davidia involucrata HOM05D003331 ORTHO05D003264 8.9e-26 121.3 119 65.5
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 1.2e-25 120.9 167 55.1
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 3.4e-25 119.4 183 49.7
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 1.3e-24 117.5 179 49.7
CAN.G225.18 Capsicum annuum HOM05D000004 ORTHO05D000002 4.9e-24 115.5 180 46.7
Haze_03715 Corylus avellana HOM05D003331 ORTHO05D003264 4.9e-24 115.5 176 50.6
Aa31LG6G12860 Aethionema arabicum HOM05D003331 ORTHO05D003264 1.4e-23 114.0 188 48.9
Sabra05G0188500 Salix brachista HOM05D003331 ORTHO05D003264 1.4e-23 114.0 174 48.9
MD15G1240800 Malus domestica HOM05D003331 ORTHO05D003264 1.9e-23 113.6 201 42.3
Nn2g14480 Nelumbo nucifera HOM05D003331 ORTHO05D003264 2.4e-23 113.2 187 47.1
Sabra05G0089800 Salix brachista HOM05D003331 ORTHO05D003264 2.4e-23 113.2 185 51.9
Gohir.A11G172900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.2e-23 112.8 171 52.0
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 9.3e-23 111.3 165 53.9
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 1.2e-22 110.9 190 46.3
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.6e-22 110.5 171 51.5
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.6e-22 110.5 171 51.5
A08p21610 Brassica napus HOM05D003331 ORTHO05D003264 2.1e-22 110.2 180 48.3
BraA08t34108Z Brassica rapa HOM05D003331 ORTHO05D003264 2.1e-22 110.2 180 48.3
Nitab4.5_0001789g0110 Nicotiana tabacum HOM05D003331 ORTHO05D003264 2.1e-22 110.2 167 48.5
Oeu020389.1 Olea europaea HOM05D003331 ORTHO05D003264 2.1e-22 110.2 172 46.5
Prupe.7G173300 Prunus persica HOM05D003331 ORTHO05D003264 2.1e-22 110.2 198 47.0
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 2.7e-22 109.8 182 49.5
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 7.8e-22 108.2 173 47.4
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 1.3e-21 107.5 170 51.2
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 1.7e-21 107.1 172 51.7
Peaxi162Scf00328g00414 Petunia axillaris HOM05D003331 ORTHO05D003264 2.3e-21 106.7 164 47.6
BolC7t46566H Brassica oleracea HOM05D003331 ORTHO05D003264 3.9e-21 105.9 188 44.7
Rhsim08G0031400 Rhododendron simsii HOM05D003331 ORTHO05D003264 3.9e-21 105.9 172 45.9
MBI08_g06420_MAGBIO Magnolia biondii HOM05D003331 ORTHO05D003264 5.1e-21 105.5 202 42.1
C07p61400 Brassica napus HOM05D003331 ORTHO05D003264 6.6e-21 105.1 188 44.7
THA.LOC104819740 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 8.7e-21 104.8 177 48.0
VMungo1215G2112 Vigna mungo HOM05D003331 ORTHO05D003264 1.1e-20 104.4 169 47.3
AT4G35900 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 2.5e-20 103.2 189 45.0
Oeu033812.1 Olea europaea HOM05D003331 ORTHO05D003264 3.3e-20 102.8 191 43.5
TAR628G1529 Trochodendron aralioides HOM05D003331 ORTHO05D003264 3.3e-20 102.8 170 47.1
MD02G1125100 Malus domestica HOM05D003331 ORTHO05D003264 4.3e-20 102.4 188 42.6
Haze_22676 Corylus avellana HOM05D003331 ORTHO05D003264 9.6e-20 101.3 176 46.0
CANSAT01G0941 Cannabis sativa HOM05D003331 ORTHO05D003264 2.8e-19 99.8 188 45.7
BolC3t20356H Brassica oleracea HOM05D003331 ORTHO05D003264 4.8e-19 99.0 182 45.1
Thhalv10025822m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 4.8e-19 99.0 190 43.7
THA.LOC104807508 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 4.8e-19 99.0 223 41.3
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 4.8e-19 99.0 171 43.3
BcaC01g00527 Brassica carinata HOM05D003331 ORTHO05D003264 8.1e-19 98.2 182 45.1
Carub.0007s0433 Capsella rubella HOM05D003331 ORTHO05D003264 8.1e-19 98.2 184 44.6
Cfa013989 Carpinus fangiana HOM05D003331 ORTHO05D003264 8.1e-19 98.2 181 47.0
Oeu012566.1 Olea europaea HOM05D003331 ORTHO05D003264 8.1e-19 98.2 170 45.9
C03p80970 Brassica napus HOM05D003331 ORTHO05D003264 1.4e-18 97.4 180 45.6
RcHm_v2.0_Chr2g0098731 Rosa chinensis HOM05D003331 ORTHO05D003264 2.4e-18 96.7 200 44.5
BcaNung04885 Brassica carinata HOM05D003331 ORTHO05D003264 3.1e-18 96.3 184 43.5
Manes.18G012121 Manihot esculenta HOM05D003331 ORTHO05D003264 6.9e-18 95.1 172 43.0
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 9.0e-18 94.7 168 45.8
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 1.2e-17 94.4 187 43.3
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.5e-17 94.0 177 42.9
Gohir.D05G187300 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.5e-17 94.0 170 44.7
Nitab4.5_0002337g0180 Nicotiana tabacum HOM05D003331 ORTHO05D003264 1.5e-17 94.0 178 42.7
Psat2g152560 Pisum sativum HOM05D003331 ORTHO05D003264 1.5e-17 94.0 202 39.6
QL02p012465 Quercus lobata HOM05D003331 ORTHO05D003264 1.5e-17 94.0 195 42.6
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 1.5e-17 94.0 170 42.9
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 2.0e-17 93.6 175 42.3
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.5e-17 92.4 170 44.1
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 5.8e-17 92.0 177 42.9
BolC1t00299H Brassica oleracea HOM05D003331 ORTHO05D003264 7.6e-17 91.7 180 42.2
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 7.6e-17 91.7 169 43.8
Nitab4.5_0000188g0190 Nicotiana tabacum HOM05D003331 ORTHO05D003264 9.9e-17 91.3 178 43.3
A01p02810 Brassica napus HOM05D003331 ORTHO05D003264 1.7e-16 90.5 179 41.9
BraA01t00264Z Brassica rapa HOM05D003331 ORTHO05D003264 1.7e-16 90.5 179 41.9
Aqoxy6G02126 Aquilegia oxysepala HOM05D003331 ORTHO05D003264 2.9e-16 89.7 186 40.9
C01p03140 Brassica napus HOM05D003331 ORTHO05D003264 3.8e-16 89.4 196 39.8
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 4.9e-16 89.0 166 41.6
BcaNung00784 Brassica carinata HOM05D003331 ORTHO05D003264 6.4e-16 88.6 196 39.8
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 6.4e-16 88.6 173 43.4
A03p63930 Brassica napus HOM05D003331 ORTHO05D003264 1.1e-15 87.8 182 42.3
BraA03t15462Z Brassica rapa HOM05D003331 ORTHO05D003264 1.1e-15 87.8 182 42.3
Lj2g0025662 Lotus japonicus HOM05D003331 ORTHO05D003264 1.9e-15 87.0 186 46.8
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 1.9e-15 87.0 171 45.0
BcaB07g31705 Brassica carinata HOM05D003331 ORTHO05D003264 4.2e-15 85.9 165 40.0
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 4.2e-15 85.9 168 43.5
BcaNung05055 Brassica carinata HOM05D003331 ORTHO05D003264 5.4e-15 85.5 185 42.2
A07p03180 Brassica napus HOM05D003331 ORTHO05D003264 5.4e-15 85.5 177 39.5
BraA07t28114Z Brassica rapa HOM05D003331 ORTHO05D003264 5.4e-15 85.5 177 39.5
Thhalv10023128m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 5.4e-15 85.5 166 38.6
Rhsim10G0207400 Rhododendron simsii HOM05D003331 ORTHO05D003264 5.4e-15 85.5 179 41.9
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 7.1e-15 85.1 180 42.8
Phvul.002G105700 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 9.3e-15 84.7 170 43.5
GSVIVG01006332001 Vitis vinifera HOM05D003331 ORTHO05D003264 9.3e-15 84.7 159 42.8
BcaB03g16550 Brassica carinata HOM05D003331 ORTHO05D003264 1.2e-14 84.3 169 40.2
C07p05420 Brassica napus HOM05D003331 ORTHO05D003264 1.2e-14 84.3 176 39.2
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 1.2e-14 84.3 175 40.0
Eucgr.J02482 Eucalyptus grandis HOM05D003331 ORTHO05D003264 1.2e-14 84.3 164 37.2
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.2e-14 84.3 177 44.6
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 1.6e-14 84.0 175 41.7
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 1.6e-14 84.0 178 39.3
A09p11560 Brassica napus HOM05D003331 ORTHO05D003264 2.1e-14 83.6 165 39.4
FAN19G3075 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.1e-14 83.6 187 42.2
FvH4_1g11270 Fragaria vesca HOM05D003331 ORTHO05D003264 2.7e-14 83.2 189 41.8
FAN23G2926 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.7e-14 83.2 185 42.2
Medtr5g022780 Medicago truncatula HOM05D003331 ORTHO05D003264 2.7e-14 83.2 194 40.2
BolC7t40942H Brassica oleracea HOM05D003331 ORTHO05D003264 4.6e-14 82.4 176 38.6
FAN26G3159 Fragaria x ananassa HOM05D003331 ORTHO05D003264 4.6e-14 82.4 187 41.7
BcaC06g36320 Brassica carinata HOM05D003331 ORTHO05D003264 6.0e-14 82.0 178 38.2
FAN28G0558 Fragaria x ananassa HOM05D003331 ORTHO05D003264 6.0e-14 82.0 184 41.8
AT2G17770 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 7.9e-14 81.6 180 38.9
Sopen02g012950 Solanum pennellii HOM05D003331 ORTHO05D003264 7.9e-14 81.6 170 41.2
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 1.8e-13 80.5 168 40.5
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 2.3e-13 80.1 164 38.4
Hund16511 Selenicereus undatus HOM05D003331 ORTHO05D003264 2.3e-13 80.1 176 42.0
Peaxi162Scf00439g00042 Petunia axillaris HOM05D003331 ORTHO05D003264 3.9e-13 79.3 172 42.4
Potri.002G018400 Populus trichocarpa HOM05D003331 ORTHO05D003264 3.9e-13 79.3 171 38.6
Actinidia27234 Actinidia chinensis HOM05D003331 ORTHO05D003264 1.1e-12 77.8 115 46.1
Atru.chr13.244 Acer truncatum HOM05D003331 ORTHO05D003264 1.5e-12 77.4 205 38.0
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 1.9e-12 77.0 171 43.3
CARHR108160 Cardamine hirsuta HOM05D003331 ORTHO05D003264 2.5e-12 76.6 170 40.0
Ah.03g143180 Amaranthus hybridus HOM05D000531 ORTHO05D003264 4.3e-12 75.9 183 37.2
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 5.6e-12 75.5 177 41.2
Sabra02G0014700 Salix brachista HOM05D003331 ORTHO05D003264 9.6e-12 74.7 166 38.6
ECA232G3395 Erigeron canadensis HOM05D003331 ORTHO05D003264 2.1e-11 73.6 188 36.7
Lalb_Chr09g0321511 Lupinus albus HOM05D003331 ORTHO05D003264 2.1e-11 73.6 174 39.7
BraA09t36795Z Brassica rapa HOM05D003331 ORTHO05D003264 3.6e-11 72.8 165 37.0
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 4.8e-11 72.4 166 41.6
CiPaw.08G068400 Carya illinoinensis HOM05D003331 ORTHO05D003264 8.1e-11 71.6 183 37.2
PSO541G2637 Papaver somniferum HOM05D003331 ORTHO05D003264 8.1e-11 71.6 217 37.3
BraA09t36802Z Brassica rapa HOM05D003331 ORTHO05D003264 1.4e-10 70.9 165 37.0
FvH4_2g38080 Fragaria vesca HOM05D003331 ORTHO05D003264 1.4e-10 70.9 192 37.0
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.8e-10 70.5 165 37.6
Ciclev10003845m.g Citrus clementina HOM05D003331 ORTHO05D003264 3.1e-10 69.7 180 38.3
TPR.G10558 Trifolium pratense HOM05D003331 ORTHO05D003264 3.1e-10 69.7 219 35.2
arahy.Tifrunner.gnm1.ann1.DM1BVQ Arachis hypogaea HOM05D057335 ORTHO05D003264 4.0e-10 69.3 185 41.1
arahy.Tifrunner.gnm1.ann1.FUM12Z Arachis hypogaea HOM05D057335 ORTHO05D003264 4.0e-10 69.3 185 41.1
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 4.0e-10 69.3 166 41.0
BcaC04g22944 Brassica carinata HOM05D003331 ORTHO05D003264 5.3e-10 68.9 165 37.0
C09p13610 Brassica napus HOM05D003331 ORTHO05D003264 5.3e-10 68.9 165 37.0
BolC9t54251H Brassica oleracea HOM05D003331 ORTHO05D003264 5.3e-10 68.9 165 37.0
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 5.3e-10 68.9 175 35.4
Cpa.g.sc6.298 Carica papaya HOM05D003331 ORTHO05D003264 6.9e-10 68.6 140 40.7
PSO675G4415 Papaver somniferum HOM05D003331 ORTHO05D003264 6.9e-10 68.6 218 36.7
SalBow3G1427 Salvia bowleyana HOM05D003331 ORTHO05D003264 9.0e-10 68.2 178 37.6
Gohir.D01G096500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.5e-09 67.4 172 37.2
Solyc02g061990.3 Solanum lycopersicum HOM05D003331 ORTHO05D003264 2.0e-09 67.0 165 38.2
FAN20G2542 Fragaria x ananassa HOM05D003331 ORTHO05D003264 5.8e-09 65.5 184 38.6
Prupe.1G361100 Prunus persica HOM05D003331 ORTHO05D003264 5.8e-09 65.5 193 38.9
Sc03g0003730 Simmondsia chinensis HOM05D003331 ORTHO05D003264 7.6e-09 65.1 175 38.3
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 9.9e-09 64.7 165 36.4
RcHm_v2.0_Chr6g0303481 Rosa chinensis HOM05D003331 ORTHO05D003264 1.3e-08 64.3 191 38.7
Lalb_Chr16g0377411 Lupinus albus HOM05D003331 ORTHO05D003264 1.7e-08 63.9 173 38.2
TAR381G1700 Trochodendron aralioides HOM05D001081 ORTHO05D007101 1.7e-08 63.9 142 39.4
Glyma.02G045500 Glycine max HOM05D003331 ORTHO05D003264 4.9e-08 62.4 166 38.0
Glyma.16G123451 Glycine max HOM05D003331 ORTHO05D003264 4.9e-08 62.4 176 35.8
EL10Ac6g15162 Beta vulgaris HOM05D003331 ORTHO05D003264 6.4e-08 62.0 182 32.4
Hund05165 Selenicereus undatus HOM05D003331 ORTHO05D003264 6.4e-08 62.0 167 34.1
MELO3C013748.2 Cucumis melo HOM05D003331 ORTHO05D003264 8.4e-08 61.6 175 36.0
ClCG10G000520 Citrullus lanatus HOM05D003331 ORTHO05D003264 1.1e-07 61.2 170 35.3
MD15G1008300 Malus domestica HOM05D003331 ORTHO05D003264 1.1e-07 61.2 201 37.3
Gohir.A05G256250 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.9e-07 60.5 177 37.3
HPP92_022184 Vanilla planifolia HOM05D003331 ORTHO05D003264 2.4e-07 60.1 174 35.1
CsaV3_3G000600 Cucumis sativus L. HOM05D003331 ORTHO05D003264 3.2e-07 59.7 176 35.2
SalBow3G2852 Salvia bowleyana HOM05D003331 ORTHO05D003264 4.2e-07 59.3 135 40.0
Cpa.g.sc26.287 Carica papaya HOM05D003331 ORTHO05D003264 5.5e-07 58.9 170 35.9
CDE09G0805 Ceratophyllum demersum HOM05D003331 ORTHO05D003264 5.5e-07 58.9 164 33.5
HPP92_022194 Vanilla planifolia HOM05D003331 ORTHO05D003264 5.5e-07 58.9 174 35.1
Sed0019142 Sechium edule HOM05D003331 ORTHO05D003264 1.2e-06 57.8 164 34.1
Gorai.009G269300 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.6e-06 57.4 176 38.1
VMungo0251G3205 Vigna mungo HOM05D003331 ORTHO05D003264 3.5e-06 56.2 171 36.3
ATR0180G005 Amborella trichopoda HOM05D000531 ORTHO05D003264 4.6e-06 55.8 166 36.7
FAN15G0714 Fragaria x ananassa HOM05D003331 ORTHO05D003264 7.9e-06 55.1 176 33.5


User provided reference genes

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