Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.1e-50 203.0 99 100.0
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.9e-33 144.1 89 84.3
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 7.8e-33 143.7 72 95.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-32 143.3 72 97.2
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-32 143.3 72 97.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.0e-32 143.3 72 97.2
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.7e-32 142.5 72 95.8
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.7e-32 142.5 72 95.8
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.7e-32 142.5 72 95.8
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.3e-32 142.1 89 83.1
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.3e-32 142.1 89 83.1
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.6e-32 140.6 87 82.8
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 8.6e-32 140.2 72 94.4
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 8.6e-32 140.2 72 94.4
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 8.6e-32 140.2 72 94.4
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.1e-31 139.8 72 93.1
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.1e-31 139.8 72 93.1
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.5e-31 139.4 72 93.1
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.5e-31 139.4 72 93.1
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.5e-31 139.4 72 91.7
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.5e-31 139.4 72 93.1
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.9e-31 139.0 72 93.1
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.9e-31 139.0 72 90.3
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.9e-31 139.0 72 91.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.9e-31 139.0 72 93.1
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.9e-31 139.0 72 91.7
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.9e-31 139.0 72 91.7
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 3.3e-31 138.3 72 91.7
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 3.3e-31 138.3 72 93.1
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 4.3e-31 137.9 72 88.9
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.3e-31 137.9 72 93.1
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 4.3e-31 137.9 71 93.0
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 4.3e-31 137.9 73 94.5
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 5.6e-31 137.5 72 91.7
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 5.6e-31 137.5 72 87.5
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 5.6e-31 137.5 75 90.7
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 7.3e-31 137.1 72 88.9
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 7.3e-31 137.1 72 88.9
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 7.3e-31 137.1 72 90.3
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 7.3e-31 137.1 72 88.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 9.5e-31 136.7 73 93.2
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 9.5e-31 136.7 73 93.2
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 9.5e-31 136.7 72 90.3
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 9.5e-31 136.7 72 90.3
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 9.5e-31 136.7 88 77.3
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.2e-30 136.3 72 91.7
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.6e-30 136.0 72 90.3
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.6e-30 136.0 72 90.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.6e-30 136.0 72 88.9
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.6e-30 136.0 72 87.5
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.6e-30 136.0 72 87.5
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.1e-30 135.6 73 91.8
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.1e-30 135.6 72 88.9
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 2.1e-30 135.6 72 90.3
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 2.1e-30 135.6 72 87.5
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.8e-30 135.2 72 86.1
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.6e-30 134.8 72 88.9
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 3.6e-30 134.8 72 86.1
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 3.6e-30 134.8 72 86.1
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 4.7e-30 134.4 72 90.3
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 6.1e-30 134.0 72 86.1
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 6.1e-30 134.0 72 86.1
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 8.0e-30 133.7 73 90.4
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.0e-29 133.3 72 90.3
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.0e-29 133.3 72 90.3
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.0e-29 133.3 72 86.1
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.8e-29 132.5 72 84.7
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.8e-29 132.5 73 89.0
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.8e-29 132.5 72 84.7
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.8e-29 132.5 72 84.7
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.8e-29 132.5 72 86.1
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 1.8e-29 132.5 72 86.1
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 3.0e-29 131.7 72 87.5
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 3.0e-29 131.7 72 84.7
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 4.0e-29 131.3 72 88.9
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 5.2e-29 131.0 72 84.7
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 5.2e-29 131.0 72 83.3
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 8.9e-29 130.2 79 86.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 8.9e-29 130.2 72 81.9
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.5e-28 129.4 72 88.9
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 2.0e-28 129.0 72 86.1
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 5.7e-28 127.5 72 81.9
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 9.8e-28 126.7 72 83.3
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 9.8e-28 126.7 72 83.3
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.7e-27 125.9 72 84.7
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.7e-27 125.9 88 63.6
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 2.2e-27 125.6 72 79.2
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 2.2e-27 125.6 72 81.9
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 2.2e-27 125.6 65 95.4
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 4.9e-27 124.4 72 80.6
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 6.4e-27 124.0 75 86.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 8.3e-27 123.6 72 81.9
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 8.3e-27 123.6 73 80.8
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.1e-26 123.2 72 79.2
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 3.2e-26 121.7 72 79.2
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 3.2e-26 121.7 72 79.2
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.2e-26 121.7 72 83.3
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 5.4e-26 120.9 68 86.8
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 5.4e-26 120.9 84 72.6
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.2e-25 119.8 72 75.0
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 3.5e-25 118.2 73 79.5
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 2.8e-22 108.6 68 76.5
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 2.8e-22 108.6 68 76.5
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.4e-21 106.3 72 77.8
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.2e-20 103.2 53 86.8
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 6.0e-17 90.9 80 53.8
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 6.8e-13 77.4 70 48.6
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 7.3e-07 57.4 29 86.2


User provided reference genes

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