Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 1.5e-81 306.2 164 100.0
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 4.1e-55 218.4 174 73.0
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 5.5e-52 208.0 177 70.6
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 5.5e-52 208.0 178 69.1
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 4.5e-46 188.3 173 64.2
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 5.9e-46 188.0 172 66.3
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 1.3e-45 186.8 173 63.6
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 2.3e-45 186.0 168 65.5
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 4.3e-44 181.8 171 64.3
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 5.6e-44 181.4 163 68.1
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 3.0e-42 175.6 171 60.8
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 3.0e-42 175.6 167 61.7
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 1.2e-41 173.7 168 60.7
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 1.3e-40 170.2 174 59.2
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 1.7e-40 169.9 172 63.4
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 3.7e-40 168.7 136 67.6
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 3.7e-40 168.7 136 67.6
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 1.8e-39 166.4 136 66.9
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 2.4e-39 166.0 172 59.9
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 2.4e-39 166.0 172 59.9
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 7.0e-39 164.5 136 64.7
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 6.0e-38 161.4 172 56.4
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 6.0e-38 161.4 171 56.7
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 7.8e-38 161.0 143 63.6
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 8.6e-37 157.5 145 62.1
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 1.1e-36 157.1 135 63.7
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 9.5e-36 154.1 166 56.6
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 2.1e-35 152.9 172 56.4
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 3.6e-35 152.1 131 65.6
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 6.2e-35 151.4 131 64.1
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 6.2e-35 151.4 131 60.3
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 1.1e-34 150.6 127 62.2
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.2e-34 148.3 164 56.1
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 6.8e-34 147.9 124 60.5
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.2e-33 147.1 138 58.7
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 1.2e-33 147.1 174 51.7
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 2.6e-33 146.0 171 51.5
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 5.8e-33 144.8 141 58.9
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 7.5e-33 144.4 136 58.8
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 7.5e-33 144.4 136 57.4
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 1.3e-32 143.7 137 59.9
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 1.3e-32 143.7 136 59.6
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 1.3e-32 143.7 143 56.6
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 2.2e-32 142.9 177 55.4
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 3.7e-32 142.1 161 57.1
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 6.4e-32 141.4 141 58.9
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 8.3e-32 141.0 136 55.1
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 8.3e-32 141.0 136 55.9
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 1.9e-31 139.8 138 59.4
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 2.4e-31 139.4 108 65.7
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 5.4e-31 138.3 127 59.8
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 5.4e-31 138.3 105 68.6
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 7.0e-31 137.9 147 62.6
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 1.6e-30 136.7 136 55.9
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 4.6e-30 135.2 125 56.8
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 4.6e-30 135.2 128 56.2
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 6.6e-29 131.3 149 53.0
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 8.6e-29 131.0 133 53.4
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 3.3e-28 129.0 136 55.1
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 4.3e-28 128.6 141 56.7
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 7.3e-28 127.9 128 53.9
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 2.1e-27 126.3 114 59.6
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 4.7e-27 125.2 155 51.0
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 6.2e-27 124.8 124 54.8
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 8.1e-27 124.4 152 50.7
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 1.1e-26 124.0 115 57.4
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 2.3e-26 122.9 102 60.8
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 3.1e-26 122.5 115 56.5
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 5.2e-26 121.7 115 56.5
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 5.2e-26 121.7 115 57.4
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 6.8e-26 121.3 115 56.5
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 6.8e-26 121.3 115 58.3
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 1.2e-25 120.6 124 53.2
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 1.2e-25 120.6 127 54.3
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 1.5e-25 120.2 115 56.5
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 1.5e-25 120.2 155 49.0
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 1.5e-25 120.2 155 49.0
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 1.5e-25 120.2 115 54.8
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 2.0e-25 119.8 115 55.7
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 2.0e-25 119.8 126 54.0
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 3.4e-25 119.0 120 58.3
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 5.8e-25 118.2 110 54.5
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 9.9e-25 117.5 155 49.0
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 9.9e-25 117.5 155 49.0
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 6.4e-24 114.8 96 60.4
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 1.9e-23 113.2 96 59.4
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 2.4e-23 112.8 175 45.1
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 5.4e-23 111.7 100 60.0
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 2.7e-22 109.4 119 62.2
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 5.1e-21 105.1 99 55.6
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 2.8e-19 99.4 82 65.9
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 6.8e-18 94.7 91 59.3
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 8.9e-18 94.4 104 45.2
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 2.7e-14 82.8 75 61.3
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 1.0e-13 80.9 97 49.5
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 1.0e-13 80.9 97 49.5
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 2.3e-13 79.7 81 54.3
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 3.0e-13 79.3 61 59.0
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 4.7e-11 72.0 88 47.7
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 6.2e-11 71.6 59 66.1
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 1.1e-10 70.9 77 50.6
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 2.6e-09 66.2 58 62.1
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 6.4e-08 61.6 62 51.6
Os04g0560700 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009470 1.2e-06 57.4 90 43.3
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.6e-06 57.0 101 38.6


User provided reference genes

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