Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 2.7e-225 785.0 409 100.0
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.6e-185 652.9 409 79.2
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.9e-182 641.3 409 78.7
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.9e-182 641.3 409 78.7
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 2.1e-180 636.0 397 80.1
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.9e-178 629.4 408 77.5
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 4.3e-178 628.2 409 81.9
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.8e-176 622.9 409 76.3
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 2.7e-172 609.0 406 75.4
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 4.9e-166 588.2 406 72.4
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.2e-164 583.6 406 72.4
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 3.5e-164 582.0 409 71.6
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 5.1e-163 578.2 410 71.2
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 2.5e-162 575.9 406 72.4
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 3.3e-162 575.5 393 73.5
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 4.3e-162 575.1 407 70.8
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 5.6e-162 574.7 409 70.2
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 2.8e-161 572.4 407 70.3
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 2.8e-161 572.4 409 70.4
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 6.2e-161 571.2 404 70.0
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 8.1e-161 570.9 406 70.4
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 1.8e-160 569.7 400 71.5
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 2.4e-160 569.3 396 71.0
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 4.0e-160 568.5 409 74.6
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 5.3e-160 568.2 406 70.2
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 5.8e-159 564.7 396 70.7
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 9.9e-159 563.9 408 69.9
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 3.8e-158 562.0 396 70.2
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 4.9e-158 561.6 405 69.6
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 8.4e-158 560.8 405 69.6
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 1.9e-157 559.7 409 67.0
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 2.4e-157 559.3 409 69.7
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 7.1e-157 557.8 448 65.2
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 9.3e-157 557.4 394 70.8
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 1.6e-156 556.6 396 68.7
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 3.5e-156 555.4 409 68.9
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 6.0e-156 554.7 394 70.1
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.0e-155 553.9 405 68.1
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 1.8e-155 553.1 406 67.5
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 2.3e-155 552.7 406 67.7
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 5.1e-155 551.6 406 67.5
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 5.1e-155 551.6 409 69.2
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 1.5e-154 550.1 396 68.7
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 7.4e-154 547.7 394 70.1
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 9.6e-154 547.4 399 67.7
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 9.6e-154 547.4 409 68.2
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 9.6e-154 547.4 395 70.4
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 1.3e-153 547.0 410 67.6
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 2.8e-153 545.8 406 66.7
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 4.8e-153 545.0 472 61.4
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 6.2e-153 544.7 394 68.0
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 6.2e-153 544.7 400 69.2
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 8.1e-153 544.3 393 69.0
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.1e-152 543.9 406 67.0
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 1.1e-152 543.9 407 68.1
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.8e-152 543.1 406 67.2
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 1.8e-152 543.1 414 67.4
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 1.8e-152 543.1 409 67.2
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 3.1e-152 542.3 409 67.2
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 6.9e-152 541.2 398 67.6
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 2.6e-151 539.3 399 68.7
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 3.4e-151 538.9 410 68.0
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 3.4e-151 538.9 408 66.2
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 4.5e-151 538.5 409 67.5
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 4.5e-151 538.5 398 67.6
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 7.6e-151 537.7 408 66.4
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 1.7e-150 536.6 409 68.2
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 2.2e-150 536.2 409 67.5
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 2.9e-150 535.8 409 68.2
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 2.9e-150 535.8 396 67.4
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 4.9e-150 535.0 424 65.6
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 6.4e-150 534.6 396 67.2
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 1.1e-149 533.9 438 64.6
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 1.1e-149 533.9 422 66.1
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 1.2e-148 530.4 405 64.2
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 2.7e-148 529.3 408 65.7
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 3.5e-148 528.9 406 65.8
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 5.1e-147 525.0 410 65.1
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 1.6e-145 520.0 408 69.6
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 6.9e-144 514.6 448 60.5
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 3.4e-143 512.3 409 65.8
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 4.5e-143 511.9 346 72.0
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 3.8e-142 508.8 312 83.0
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 3.8e-142 508.8 409 66.5
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 3.0e-139 499.2 402 62.7
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 3.9e-139 498.8 396 66.2
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 1.6e-137 493.4 406 65.0
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 2.8e-137 492.7 391 67.0
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 2.6e-135 486.1 417 60.7
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 2.1e-132 476.5 306 79.1
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 5.0e-126 455.3 355 64.2
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 2.5e-125 453.0 406 58.1
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 4.2e-125 452.2 398 62.6
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 7.2e-125 451.4 405 59.8
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 8.8e-123 444.5 406 58.9
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 1.1e-122 444.1 347 64.3
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 4.8e-121 438.7 361 62.3
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 6.3e-121 438.3 307 71.0
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 6.3e-121 438.3 312 70.5
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 8.2e-121 438.0 317 71.3
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 1.4e-120 437.2 305 71.5
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 2.1e-116 423.3 324 65.4
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 1.5e-114 417.2 394 53.3
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 1.3e-113 414.1 314 67.2
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 2.3e-107 393.3 423 53.0
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 2.8e-105 386.3 396 52.0
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 5.9e-103 378.6 408 50.0
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 6.8e-99 365.2 334 59.3
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.7e-95 353.2 409 50.6
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 3.5e-95 352.8 253 70.0
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 5.0e-94 349.0 387 49.9
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 1.3e-89 334.3 548 37.2
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.7e-89 334.0 346 55.5
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 1.4e-88 330.9 291 60.8
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 1.4e-88 330.9 272 60.3
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 8.6e-86 321.6 243 64.2
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 3.4e-82 309.7 356 51.1
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 9.8e-82 308.1 395 51.1
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 1.1e-80 304.7 284 58.8
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 6.8e-75 285.4 200 71.0
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 2.3e-70 270.4 236 61.4
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 5.8e-66 255.8 216 61.6
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 2.9e-65 253.4 395 40.0
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 2.3e-62 243.8 393 39.9
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.9e-61 240.7 406 37.4
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 5.2e-59 232.6 396 37.6
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 3.8e-57 226.5 202 58.4
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 8.4e-57 225.3 122 86.9
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.1e-56 224.9 122 88.5
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 1.4e-56 224.6 335 41.8
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 9.3e-56 221.9 181 64.1
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 5.6e-53 212.6 120 80.0
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 9.6e-53 211.8 120 83.3
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 4.9e-49 199.5 398 34.9
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 3.2e-48 196.8 148 70.3
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 6.6e-46 189.1 116 76.7
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 1.3e-44 184.9 388 34.0
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 1.4e-43 181.4 233 49.4
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 7.6e-42 175.6 255 39.6
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 1.7e-41 174.5 88 95.5
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 9.3e-40 168.7 145 60.0
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 2.4e-35 154.1 98 75.5
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 1.4e-27 128.3 89 74.2
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.1e-22 109.8 62 82.3
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.1e-22 109.8 62 82.3
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 8.7e-22 109.0 60 86.7
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 2.5e-21 107.5 74 67.6
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 2.8e-20 104.0 385 26.2
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 3.6e-15 87.0 60 66.7
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 1.8e-14 84.7 121 45.5
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 2.0e-13 81.3 57 68.4
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 4.1e-11 73.6 43 67.4


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