Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08481 Davidia involucrata HOM05D000110 ORTHO05D179379 1.1e-83 313.2 152 100.0
Dinv39354 Davidia involucrata HOM05D000110 ORTHO05D000024 2.1e-21 106.3 87 65.5
Dinv36010 Davidia involucrata HOM05D000110 ORTHO05D000024 1.2e-19 100.5 77 64.9
TAR625G0524 Trochodendron aralioides HOM05D000110 ORTHO05D000024 1.2e-13 80.5 115 45.2
Hma1.2p1_0260F.1_g104550 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 4.7e-13 78.6 80 57.5
CSS0002776 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 2.9e-10 69.3 81 54.3
CSS0009465 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 8.3e-10 67.8 73 52.1
CSS0048433 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 8.3e-10 67.8 73 52.1
Haze_15192 Corylus avellana HOM05D000110 ORTHO05D000024 1.4e-09 67.0 65 53.8
CiPaw.01G026600 Carya illinoinensis HOM05D000110 ORTHO05D000024 5.4e-09 65.1 65 56.9
Manes.12G095300 Manihot esculenta HOM05D000110 ORTHO05D000024 7.0e-09 64.7 68 52.9
Nn5g29390 Nelumbo nucifera HOM05D000110 ORTHO05D000024 2.0e-08 63.2 90 41.1
QL06p043784 Quercus lobata HOM05D000110 ORTHO05D000024 4.6e-08 62.0 63 57.1
Potri.007G036400 Populus trichocarpa HOM05D000110 ORTHO05D000024 7.8e-08 61.2 59 52.5
Nn6g32126 Nelumbo nucifera HOM05D000110 ORTHO05D000024 1.0e-07 60.8 63 49.2
Thecc.01G047900 Theobroma cacao HOM05D000110 ORTHO05D000024 1.7e-07 60.1 59 55.9
MD15G1275300 Malus domestica HOM05D000110 ORTHO05D000024 2.3e-07 59.7 61 50.8
Hma1.2p1_0546F.1_g176160 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 3.0e-07 59.3 70 45.7
TWI09G0641 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 3.0e-07 59.3 61 55.7
Eucgr.H01971 Eucalyptus grandis HOM05D000110 ORTHO05D000024 6.6e-07 58.2 56 55.4
Gohir.A02G160400 Gossypium hirsutum HOM05D000110 ORTHO05D000024 6.6e-07 58.2 52 55.8
Gohir.D03G019900 Gossypium hirsutum HOM05D000110 ORTHO05D000024 6.6e-07 58.2 52 55.8
Gorai.003G021000 Gossypium raimondii HOM05D000110 ORTHO05D000024 6.6e-07 58.2 52 55.8
Gohir.A12G068500 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.1e-06 57.4 70 44.3
Manes.13G130300 Manihot esculenta HOM05D000110 ORTHO05D000024 1.1e-06 57.4 54 57.4
Sabra07G0031900 Salix brachista HOM05D000110 ORTHO05D000024 1.1e-06 57.4 59 49.2
vmacro05294 Vaccinium macrocarpon HOM05D000110 ORTHO05D000024 1.5e-06 57.0 75 41.3
Cc07_g05550 Coffea canephora HOM05D000110 ORTHO05D000024 1.9e-06 56.6 72 48.6
Gohir.D12G068300 Gossypium hirsutum HOM05D000110 ORTHO05D000024 1.9e-06 56.6 70 44.3
Gorai.008G071900 Gossypium raimondii HOM05D000110 ORTHO05D000024 1.9e-06 56.6 70 44.3
SalBow1G5337 Salvia bowleyana HOM05D000110 ORTHO05D000024 2.5e-06 56.2 48 62.5
Prupe.7G142500 Prunus persica HOM05D000110 ORTHO05D000024 3.3e-06 55.8 47 61.7
Nitab4.5_0000108g0290 Nicotiana tabacum HOM05D000110 ORTHO05D000024 4.3e-06 55.5 68 47.1
TWI36G1527 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 4.3e-06 55.5 80 47.5
Oeu032935.1 Olea europaea HOM05D000110 ORTHO05D000024 5.6e-06 55.1 67 50.7
Duzib147G1091 Durio zibethinus HOM05D000110 ORTHO05D000024 7.3e-06 54.7 81 42.0
Nitab4.5_0001014g0060 Nicotiana tabacum HOM05D000110 ORTHO05D000024 7.3e-06 54.7 56 51.8
PGSC0003DMG400010075 Solanum tuberosum HOM05D000110 ORTHO05D000024 7.3e-06 54.7 90 40.0


User provided reference genes

Program Settings