Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08424 Davidia involucrata HOM05D008310 ORTHO05D010460 3.6e-51 204.5 96 100.0
Dinv10267 Davidia involucrata HOM05D008310 ORTHO05D010460 3.5e-38 161.4 93 83.9
Hma1.2p1_0501F.1_g167530 Hydrangea macrophylla HOM05D008310 ORTHO05D010460 3.7e-32 141.4 91 75.8
Cfa017132 Carpinus fangiana HOM05D008310 ORTHO05D010460 2.0e-25 119.0 99 61.6
Thecc.05G008400 Theobroma cacao HOM05D008310 ORTHO05D010460 9.8e-25 116.7 90 64.4
CiPaw.10G160100 Carya illinoinensis HOM05D008310 ORTHO05D010460 1.2e-22 109.8 92 59.8
Actinidia32536 Actinidia chinensis HOM05D008310 ORTHO05D010460 1.6e-22 109.4 91 65.9
ECA247G2349 Erigeron canadensis HOM05D008310 ORTHO05D010460 2.7e-22 108.6 93 57.0
Prupe.6G283600 Prunus persica HOM05D008310 ORTHO05D010460 4.6e-22 107.8 92 58.7
FAN02G0122 Fragaria x ananassa HOM05D008310 ORTHO05D010460 2.3e-21 105.5 92 55.4
DCAR_028878 Daucus carota HOM05D008310 ORTHO05D010460 3.9e-21 104.8 93 59.1
FAN05G0762 Fragaria x ananassa HOM05D008310 ORTHO05D010460 5.1e-21 104.4 92 54.3
FAN05G3091 Fragaria x ananassa HOM05D008310 ORTHO05D010460 5.1e-21 104.4 92 54.3
RcHm_v2.0_Chr3g0461821 Rosa chinensis HOM05D008310 ORTHO05D010460 5.1e-21 104.4 91 56.0
FvH4_6g10780 Fragaria vesca HOM05D008310 ORTHO05D010460 6.6e-21 104.0 92 54.3
FAN14G2720 Fragaria x ananassa HOM05D008310 ORTHO05D010460 6.6e-21 104.0 92 54.3
Ciclev10013501m.g Citrus clementina HOM05D008310 ORTHO05D010460 8.6e-21 103.6 95 56.8
Gohir.D04G135000 Gossypium hirsutum HOM05D008310 ORTHO05D010460 8.6e-21 103.6 95 54.7
Manes.09G110500 Manihot esculenta HOM05D008310 ORTHO05D010460 8.6e-21 103.6 93 55.9
TAR623G0221 Trochodendron aralioides HOM05D008310 ORTHO05D010460 1.5e-20 102.8 87 59.8
Gohir.A04G095056 Gossypium hirsutum HOM05D008310 ORTHO05D010460 4.3e-20 101.3 95 51.6
Gorai.012G118600 Gossypium raimondii HOM05D008310 ORTHO05D010460 5.6e-20 100.9 95 53.7
FAN09G2600 Fragaria x ananassa HOM05D008310 ORTHO05D010460 7.3e-20 100.5 92 57.6
FAN09G4723 Fragaria x ananassa HOM05D008310 ORTHO05D010460 7.3e-20 100.5 92 57.6
Actinidia20758 Actinidia chinensis HOM05D008310 ORTHO05D010460 9.5e-20 100.1 80 66.2
Lj3g0016268 Lotus japonicus HOM05D008310 ORTHO05D010460 9.5e-20 100.1 93 54.8
HanXRQChr10g0287151 Helianthus annuus HOM05D008310 ORTHO05D010460 2.8e-19 98.6 91 53.8
Phvul.008G093800 Phaseolus vulgaris HOM05D008310 ORTHO05D010460 4.7e-19 97.8 92 52.2
TWI74G1202 Tripterygium wilfordii HOM05D008310 ORTHO05D010460 8.1e-19 97.1 95 56.8
Atru.chr8.2319 Acer truncatum HOM05D008310 ORTHO05D010460 2.3e-18 95.5 95 52.6
TPR.G6627 Trifolium pratense HOM05D008310 ORTHO05D010460 4.0e-18 94.7 92 54.3
Eucgr.A00610 Eucalyptus grandis HOM05D008310 ORTHO05D010460 5.2e-18 94.4 92 55.4
Glyma.07G155100 Glycine max HOM05D008310 ORTHO05D010460 6.8e-18 94.0 95 53.7
Medtr7g069970 Medicago truncatula HOM05D008310 ORTHO05D010460 6.8e-18 94.0 92 55.4
arahy.Tifrunner.gnm1.ann1.HA647U Arachis hypogaea HOM05D008310 ORTHO05D010460 2.6e-17 92.0 98 50.0
Glyma.18G205700 Glycine max HOM05D008310 ORTHO05D010460 2.6e-17 92.0 87 55.2
Aqoxy1G01310 Aquilegia oxysepala HOM05D008310 ORTHO05D010460 3.4e-17 91.7 89 51.7
arahy.Tifrunner.gnm1.ann1.U260GH Arachis hypogaea HOM05D008310 ORTHO05D010460 3.4e-17 91.7 99 49.5
CsaV3_4G026500 Cucumis sativus L. HOM05D008310 ORTHO05D010460 4.9e-16 87.8 94 47.9
Psat3g124760 Pisum sativum HOM05D008310 ORTHO05D010460 6.4e-16 87.4 78 57.7
Sabra06G0080200 Salix brachista HOM05D008310 ORTHO05D010460 6.4e-16 87.4 90 48.9
Rhsim05G0223900 Rhododendron simsii HOM05D008310 ORTHO05D010460 1.4e-15 86.3 131 41.2
Potri.006G103800 Populus trichocarpa HOM05D008310 ORTHO05D010460 3.2e-15 85.1 90 48.9
Solyc09g015430.3 Solanum lycopersicum HOM05D008310 ORTHO05D010460 2.7e-14 82.0 92 51.1
Nitab4.5_0004676g0010 Nicotiana tabacum HOM05D008310 ORTHO05D010460 7.8e-14 80.5 91 50.5
Lj1g0025992 Lotus japonicus HOM05D008310 ORTHO05D010460 3.9e-13 78.2 89 49.4
Sed0025498 Sechium edule HOM05D008310 ORTHO05D010460 1.1e-12 76.6 88 48.9
Glyma.01G124400 Glycine max HOM05D008310 ORTHO05D010460 3.3e-12 75.1 93 43.0
arahy.Tifrunner.gnm1.ann1.21T5B8 Arachis hypogaea HOM05D008310 ORTHO05D010460 4.3e-12 74.7 97 41.2
Potri.016G124300 Populus trichocarpa HOM05D008310 ORTHO05D010460 7.3e-12 73.9 88 45.5
arahy.Tifrunner.gnm1.ann1.MKIS3D Arachis hypogaea HOM05D008310 ORTHO05D010460 9.6e-12 73.6 97 40.2
Glyma.03G050200 Glycine max HOM05D008310 ORTHO05D010460 5.2e-10 67.8 81 44.4
CDE07G0647 Ceratophyllum demersum HOM05D008310 ORTHO05D010460 2.0e-09 65.9 84 41.7
Sopen09g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-09 65.5 71 53.5
Hund17931 Selenicereus undatus HOM05D008310 ORTHO05D010460 5.8e-09 64.3 124 33.9
EL10Ac5g12506 Beta vulgaris HOM05D008310 ORTHO05D010460 1.7e-08 62.8 105 40.0
Nitab4.5_0000230g0110 Nicotiana tabacum HOM05D008310 ORTHO05D010460 3.2e-07 58.5 31 83.9
AUR62030777 Chenopodium quinoa HOM05D008310 ORTHO05D010460 4.6e-06 54.7 103 36.9


User provided reference genes

Program Settings