Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 1.5e-236 822.4 388 100.0
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 5.7e-188 661.0 356 83.4
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.6e-187 659.4 358 83.2
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 4.1e-186 654.8 362 82.0
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 1.5e-185 652.9 360 82.2
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-183 646.0 360 81.4
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-183 646.0 360 81.4
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.9e-183 646.0 360 81.4
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.5e-183 645.6 360 80.8
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 2.5e-183 645.6 352 83.8
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.2e-183 644.8 360 80.8
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.2e-183 644.8 360 80.8
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 5.5e-183 644.4 360 81.1
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-182 642.9 360 80.8
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.6e-182 642.9 360 80.6
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-182 642.5 360 80.6
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.7e-182 642.1 360 80.3
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.6e-182 641.7 360 80.8
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.9e-182 640.6 360 80.8
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 1.4e-181 639.8 359 79.7
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 3.7e-179 631.7 359 79.9
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 6.3e-179 630.9 352 81.0
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.1e-178 630.2 363 79.6
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.8e-178 629.4 363 78.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.8e-178 629.4 352 81.2
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 2.4e-178 629.0 360 79.2
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.4e-177 625.2 352 81.0
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 1.0e-176 623.6 361 79.2
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.7e-176 622.9 359 79.4
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 2.2e-176 622.5 362 78.2
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 1.9e-175 619.4 359 76.6
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 7.2e-175 617.5 353 80.5
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.2e-174 616.7 351 80.1
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 6.1e-174 614.4 360 77.2
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 8.8e-173 610.5 360 77.2
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 5.7e-172 607.8 361 77.0
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 5.7e-172 607.8 358 74.9
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 9.7e-172 607.1 360 76.7
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 3.7e-171 605.1 365 74.8
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 3.7e-171 605.1 360 75.6
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 1.4e-170 603.2 359 75.8
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 4.1e-170 601.7 353 78.2
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 5.3e-170 601.3 361 76.7
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.2e-169 600.1 360 75.3
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 2.0e-169 599.4 359 73.0
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 3.4e-169 598.6 360 75.0
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 5.9e-169 597.8 359 76.3
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 5.9e-169 597.8 360 75.6
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 1.3e-168 596.7 359 75.5
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 6.5e-168 594.3 359 75.8
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 1.4e-167 593.2 357 75.6
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.9e-167 592.8 355 76.9
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 1.4e-165 586.6 352 75.0
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 1.4e-165 586.6 358 74.6
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 3.9e-165 585.1 348 76.7
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 1.1e-164 583.6 372 70.2
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 5.7e-164 581.3 357 73.9
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 7.4e-164 580.9 361 72.0
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 3.7e-163 578.6 345 77.1
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 4.8e-163 578.2 357 74.5
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 4.8e-163 578.2 351 74.4
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 6.3e-163 577.8 357 74.2
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 8.2e-163 577.4 357 74.8
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 1.8e-162 576.2 359 72.7
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 4.1e-162 575.1 358 73.5
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 7.0e-162 574.3 353 73.4
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 9.1e-162 573.9 365 72.6
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 5.9e-161 571.2 362 71.3
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 5.9e-161 571.2 353 73.9
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 1.3e-160 570.1 330 77.3
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 1.7e-160 569.7 360 73.6
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.7e-160 569.7 352 73.3
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 5.0e-160 568.2 359 73.0
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 6.5e-160 567.8 360 72.2
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 3.2e-159 565.5 360 72.8
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.6e-158 563.1 358 72.3
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 3.6e-158 562.0 352 71.3
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 3.6e-158 562.0 354 73.2
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.4e-154 549.3 321 76.3
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 4.1e-154 548.5 327 74.9
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 5.9e-153 544.7 323 75.5
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 5.9e-153 544.7 369 67.2
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 1.0e-152 543.9 301 81.7
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 8.0e-150 534.3 363 68.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.3e-149 532.7 354 69.5
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 4.5e-145 518.5 360 66.9
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 1.0e-144 517.3 302 77.8
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.6e-142 510.0 365 65.5
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 4.9e-139 498.4 365 63.6
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 3.8e-136 488.8 365 63.0
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.5e-132 476.9 360 64.4
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 1.2e-124 450.7 355 62.5
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 1.5e-119 433.7 353 57.8
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 7.3e-119 431.4 353 58.9
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 4.4e-116 422.2 246 78.9
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.5e-111 407.1 303 64.7
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 2.4e-106 389.8 318 58.2
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 3.3e-87 326.2 250 61.2
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.2e-76 291.2 384 41.4
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.1e-74 284.6 162 79.0
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 1.2e-73 281.2 302 48.3
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 4.1e-69 266.2 392 38.5
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 1.3e-67 261.2 414 38.9
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 5.0e-67 259.2 161 72.0
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.8e-48 197.6 352 36.1
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 2.9e-43 180.3 118 65.3
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 5.9e-36 156.0 325 32.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 1.9e-26 124.4 260 33.8
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 3.5e-20 103.6 232 31.0
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 7.3e-18 95.9 52 86.5
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 4.3e-10 70.1 85 44.7


User provided reference genes

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