Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 1.6e-191 672.5 339 100.0
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 2.3e-113 412.9 341 69.8
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 3.8e-47 193.0 314 45.2
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 3.2e-46 189.9 331 42.0
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 1.3e-39 167.9 355 43.4
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 8.5e-39 165.2 356 41.0
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 4.2e-38 162.9 347 40.9
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 6.1e-37 159.1 332 38.9
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 8.0e-37 158.7 361 40.7
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.0e-36 158.3 362 40.6
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 5.2e-36 156.0 356 38.5
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 2.8e-34 150.2 334 39.8
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 2.1e-29 134.0 332 37.7
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 4.7e-29 132.9 314 35.7
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 4.7e-29 132.9 353 38.0
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 1.0e-28 131.7 377 35.8
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 4.0e-28 129.8 357 35.9
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 4.0e-28 129.8 357 35.9
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 5.7e-27 125.9 373 38.1
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 9.8e-27 125.2 357 35.3
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 1.3e-26 124.8 291 37.1
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 3.7e-26 123.2 291 37.1
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 3.1e-25 120.2 372 38.4
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 5.4e-25 119.4 343 37.0
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 1.2e-24 118.2 325 36.0
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 1.6e-24 117.9 352 36.1
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 3.5e-24 116.7 370 32.2
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 4.5e-24 116.3 325 35.1
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 5.9e-24 115.9 394 34.0
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 2.3e-23 114.0 343 34.7
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 3.8e-23 113.2 359 36.2
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 4.2e-22 109.8 387 36.7
Nn1g03824 Nelumbo nucifera HOM05D008268 ORTHO05D010144 2.8e-21 107.1 283 33.2
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 3.6e-21 106.7 383 35.2
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 4.4e-19 99.8 363 34.2
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 9.8e-19 98.6 362 32.0
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.3e-18 98.2 375 34.4
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 4.9e-18 96.3 245 36.7
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 5.4e-17 92.8 375 33.1
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 7.0e-17 92.4 387 30.7
Peaxi162Scf01216g00063 Petunia axillaris HOM05D015394 ORTHO05D017774 7.0e-17 92.4 392 33.4
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 4.5e-16 89.7 369 33.9
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 4.5e-16 89.7 369 33.9
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 1.7e-15 87.8 314 33.1
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 2.9e-15 87.0 352 31.0
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 6.6e-15 85.9 390 30.5
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 8.6e-15 85.5 393 29.8
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 8.6e-15 85.5 357 30.8
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 1.1e-14 85.1 336 32.4
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 1.5e-14 84.7 287 34.5
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 1.5e-14 84.7 178 39.3
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 2.1e-13 80.9 326 32.5
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 1.0e-12 78.6 87 56.3
CDE02G2061 Ceratophyllum demersum HOM05D057939 ORTHO05D010144 5.2e-12 76.3 237 31.6
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 1.2e-11 75.1 340 29.1
Eucgr.F01065 Eucalyptus grandis HOM05D008268 ORTHO05D010144 1.2e-11 75.1 188 35.1
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 2.6e-11 73.9 150 38.0
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 3.4e-11 73.6 317 30.3
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 7.5e-11 72.4 316 30.7
Sed0023643 Sechium edule HOM05D008268 ORTHO05D010144 9.8e-11 72.0 313 28.4
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 1.7e-10 71.2 376 30.1
Solyc07g063670.2 Solanum lycopersicum HOM05D015394 ORTHO05D017774 6.4e-10 69.3 357 28.0
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 2.4e-09 67.4 333 29.7
Eucgr.F01064 Eucalyptus grandis HOM05D008268 ORTHO05D010144 3.2e-09 67.0 98 46.9
CAN.G162.112 Capsicum annuum HOM05D015394 ORTHO05D017774 7.0e-09 65.9 322 29.2
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 7.0e-09 65.9 104 41.3
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 2.0e-08 64.3 342 28.4
Sabra15G0071800 Salix brachista HOM05D019858 ORTHO05D010144 4.6e-08 63.2 199 31.7
Sopen07g031850 Solanum pennellii HOM05D015394 ORTHO05D017774 6.6e-07 59.3 400 26.8
FAN15G0243 Fragaria x ananassa HOM05D014484 ORTHO05D017021 8.6e-07 58.9 346 26.3
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 8.6e-07 58.9 352 26.4
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 1.5e-06 58.2 330 29.7
ATR1132G078 Amborella trichopoda HOM05D008268 ORTHO05D010144 2.5e-06 57.4 316 29.7
Lj3g0025864 Lotus japonicus HOM05D008268 ORTHO05D010144 5.6e-06 56.2 340 28.5
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 5.6e-06 56.2 379 29.6


User provided reference genes

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