Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 1.4e-102 376.3 189 100.0
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 5.2e-54 214.9 188 60.1
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 1.0e-41 174.1 203 47.3
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 4.3e-40 168.7 199 48.2
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 2.0e-37 159.8 191 47.1
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 1.7e-33 146.7 191 45.0
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 3.6e-31 139.0 192 43.8
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 1.4e-30 137.1 201 40.8
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 9.9e-29 131.0 195 42.1
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 4.9e-28 128.6 208 41.8
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 1.9e-27 126.7 198 42.4
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 2.4e-27 126.3 204 40.2
Nitab4.5_0000639g0010 Nicotiana tabacum HOM05D008666 ORTHO05D009871 5.4e-27 125.2 204 39.2
Peaxi162Scf00000g00503 Petunia axillaris HOM05D008666 ORTHO05D009871 1.2e-26 124.0 188 43.1
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 5.1e-25 118.6 195 36.4
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 6.7e-25 118.2 198 41.9
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 1.3e-23 114.0 207 38.2
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 4.8e-23 112.1 200 36.0
vmacro09555 Vaccinium macrocarpon HOM05D008666 ORTHO05D009871 9.0e-22 107.8 186 38.7
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 2.0e-21 106.7 192 38.0
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 2.2e-20 103.2 187 36.9
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 2.9e-20 102.8 185 34.6
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 1.9e-19 100.1 223 38.1
Rhsim04G0017800 Rhododendron simsii HOM05D008666 ORTHO05D009871 5.5e-19 98.6 216 35.2
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 7.1e-19 98.2 142 40.8
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 1.2e-18 97.4 225 32.0
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 1.3e-17 94.0 138 39.1
PGSC0003DMG400008566 Solanum tuberosum HOM05D008666 ORTHO05D009871 1.3e-17 94.0 183 33.9
TAR599G0004 Trochodendron aralioides HOM05D008666 ORTHO05D009871 1.8e-17 93.6 92 48.9
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 3.0e-17 92.8 237 32.9
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 3.0e-17 92.8 237 32.9
Atru.chr2.2827 Acer truncatum HOM05D038199 ORTHO05D009871 3.9e-17 92.4 208 35.1
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 3.9e-17 92.4 92 50.0
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 6.7e-17 91.7 81 55.6
Lsat_1_v5_gn_9_95760 Lactuca sativa HOM05D008666 ORTHO05D009871 3.3e-16 89.4 121 44.6
Sopen12g006860 Solanum pennellii HOM05D008666 ORTHO05D009871 1.6e-15 87.0 182 32.4
Nitab4.5_0005141g0060 Nicotiana tabacum HOM05D008666 ORTHO05D009871 3.7e-15 85.9 91 47.3
Nn1g06738 Nelumbo nucifera HOM05D008666 ORTHO05D009871 1.4e-14 84.0 92 47.8
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 1.4e-14 84.0 73 54.8
Nitab4.5_0000662g0020 Nicotiana tabacum HOM05D008666 ORTHO05D009871 1.8e-14 83.6 99 44.4
Solyc12g013520.3 Solanum lycopersicum HOM05D008666 ORTHO05D009871 2.4e-14 83.2 181 30.9
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 4.0e-14 82.4 91 46.2
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 6.9e-14 81.6 106 38.7
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 9.0e-14 81.3 230 32.6
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 2.0e-13 80.1 223 29.6
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 3.4e-13 79.3 130 39.2
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 7.6e-13 78.2 172 34.9
Oeu008031.1 Olea europaea HOM05D052362 ORTHO05D009871 4.9e-12 75.5 90 48.9
QL08p018585 Quercus lobata HOM05D010293 ORTHO05D009871 1.1e-11 74.3 278 26.6
AUR62026950 Chenopodium quinoa HOM05D014664 ORTHO05D009871 2.5e-11 73.2 188 26.1
CSS0038280 Camellia sinensis var. sinensis HOM05D010293 ORTHO05D009871 3.2e-11 72.8 109 38.5
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 5.5e-11 72.0 139 33.8
EL10Ac5g12049 Beta vulgaris HOM05D014664 ORTHO05D009871 7.1e-11 71.6 199 29.1
ECA240G0223 Erigeron canadensis HOM05D008666 ORTHO05D009871 2.1e-10 70.1 116 38.8
Ah.10g037450 Amaranthus hybridus HOM05D014664 ORTHO05D009871 6.1e-10 68.6 188 22.3
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 1.0e-09 67.8 136 33.8
AUR62043278 Chenopodium quinoa HOM05D014664 ORTHO05D009871 1.3e-09 67.4 189 27.0
Sc11g0008030 Simmondsia chinensis HOM05D014664 ORTHO05D009871 2.3e-09 66.6 207 28.5
Sopen12g006870 Solanum pennellii HOM05D008666 ORTHO05D009871 2.3e-09 66.6 144 32.6
ECA240G3731 Erigeron canadensis HOM05D001107 ORTHO05D009871 3.0e-09 66.2 151 31.1
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 5.1e-09 65.5 141 34.8
Haze_09524 Corylus avellana HOM05D010293 ORTHO05D009871 2.5e-08 63.2 108 38.9
FAN25G3202 Fragaria x ananassa HOM05D010293 ORTHO05D009871 4.3e-08 62.4 124 37.1
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 5.7e-08 62.0 147 29.3
Atru.chr2.2828 Acer truncatum HOM05D038199 ORTHO05D009871 9.7e-08 61.2 103 39.8
Rhsim04G0017700 Rhododendron simsii HOM05D008666 ORTHO05D009871 1.3e-07 60.8 121 37.2
Atru.chr2.2883 Acer truncatum HOM05D038199 ORTHO05D009871 3.7e-07 59.3 103 38.8
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 4.8e-07 58.9 110 33.6
QL08p018535 Quercus lobata HOM05D010293 ORTHO05D009871 4.8e-07 58.9 101 37.6
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 2.4e-06 56.6 166 30.1
CAN.G1320.12 Capsicum annuum HOM05D008666 ORTHO05D009871 5.3e-06 55.5 93 33.3
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 9.0e-06 54.7 166 29.5
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 9.0e-06 54.7 140 30.0


User provided reference genes

Program Settings