Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08337 Davidia involucrata HOM05D008538 ORTHO05D010142 2.2e-97 359.0 186 100.0
Hma1.2p1_1003F.1_g246760 Hydrangea macrophylla HOM05D008538 ORTHO05D010142 1.8e-54 216.5 194 60.8
Actinidia18751 Actinidia chinensis HOM05D008538 ORTHO05D010142 6.7e-54 214.5 189 63.5
CSS0013852 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 9.1e-51 204.1 187 62.0
CSS0046110 Camellia sinensis var. sinensis HOM05D008538 ORTHO05D010142 3.5e-50 202.2 187 61.5
Cc05_g12630 Coffea canephora HOM05D008538 ORTHO05D010142 1.0e-41 174.1 193 51.8
PGSC0003DMG400025004 Solanum tuberosum HOM05D008538 ORTHO05D010142 2.5e-40 169.5 190 53.7
Nitab4.5_0000207g0250 Nicotiana tabacum HOM05D008538 ORTHO05D010142 3.0e-38 162.5 189 51.9
vmacro09554 Vaccinium macrocarpon HOM05D008538 ORTHO05D010142 1.7e-36 156.8 270 41.9
Lj8C159G11 Lonicera japonica HOM05D008538 ORTHO05D010142 9.4e-32 141.0 216 43.5
Lsat_1_v5_gn_5_6940 Lactuca sativa HOM05D008538 ORTHO05D010142 2.3e-30 136.3 186 45.2
Sopen12g006890 Solanum pennellii HOM05D008538 ORTHO05D010142 2.3e-30 136.3 189 46.0
PGSC0003DMG403008565 Solanum tuberosum HOM05D008538 ORTHO05D010142 3.0e-30 136.0 189 46.0
Nitab4.5_0000662g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 1.5e-29 133.7 189 46.0
Solyc12g013540.2 Solanum lycopersicum HOM05D008538 ORTHO05D010142 1.5e-29 133.7 189 45.5
Nitab4.5_0005141g0010 Nicotiana tabacum HOM05D008538 ORTHO05D010142 4.4e-29 132.1 189 46.6
CAN.G1320.13 Capsicum annuum HOM05D008538 ORTHO05D010142 5.4e-27 125.2 188 46.3
Nitab4.5_0001320g0090 Nicotiana tabacum HOM05D008538 ORTHO05D010142 5.4e-27 125.2 189 45.0
ECA246G3043 Erigeron canadensis HOM05D008538 ORTHO05D010142 7.0e-27 124.8 186 43.5
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 3.3e-24 115.9 125 48.8
MD03G1219700 Malus domestica HOM05D008538 ORTHO05D010142 1.2e-23 114.0 140 49.3
Peaxi162Scf00000g00508 Petunia axillaris HOM05D008538 ORTHO05D010142 1.2e-23 114.0 186 43.5
Haze_09520 Corylus avellana HOM05D008538 ORTHO05D010142 1.6e-23 113.6 150 49.3
Rhsim04G0018000 Rhododendron simsii HOM05D008538 ORTHO05D010142 6.1e-23 111.7 94 64.9
Cfa020514 Carpinus fangiana HOM05D008538 ORTHO05D010142 1.8e-22 110.2 137 51.1
FAN21G1320 Fragaria x ananassa HOM05D008538 ORTHO05D010142 5.2e-22 108.6 137 50.4
FAN25G2351 Fragaria x ananassa HOM05D001272 ORTHO05D001843 6.8e-22 108.2 145 47.6
FvH4_3g20870 Fragaria vesca HOM05D008538 ORTHO05D010142 1.5e-21 107.1 137 49.6
FAN11G3526 Fragaria x ananassa HOM05D008538 ORTHO05D010142 1.5e-21 107.1 137 49.6
Prupe.4G189200 Prunus persica HOM05D008538 ORTHO05D010142 4.4e-21 105.5 141 46.1
TWI39G0570 Tripterygium wilfordii HOM05D008538 ORTHO05D010142 4.9e-20 102.1 128 45.3
QL08p018693 Quercus lobata HOM05D008538 ORTHO05D010142 1.1e-19 100.9 149 43.0
Atru.chr2.2829 Acer truncatum HOM05D008538 ORTHO05D010142 4.1e-19 99.0 132 46.2
Ciclev10010245m.g Citrus clementina HOM05D008538 ORTHO05D010142 3.9e-17 92.4 126 49.2
Manes.03G116200 Manihot esculenta HOM05D008538 ORTHO05D010142 3.9e-17 92.4 143 40.6
MSTRG.6852 Avicennia marina HOM05D008538 ORTHO05D010142 1.5e-16 90.5 117 48.7
HanXRQChr08g0234631 Helianthus annuus HOM05D008538 ORTHO05D010142 2.5e-16 89.7 186 36.6
Manes.15G083500 Manihot esculenta HOM05D008538 ORTHO05D010142 7.3e-16 88.2 129 42.6
QL93p2023_0080 Quercus lobata HOM05D008538 ORTHO05D010142 9.5e-16 87.8 148 40.5
ClCG10G006550 Citrullus lanatus HOM05D008538 ORTHO05D010142 1.6e-15 87.0 144 36.8
MELO3C016550.2 Cucumis melo HOM05D008538 ORTHO05D010142 3.6e-15 85.9 139 41.0
Thecc.07G072500 Theobroma cacao HOM05D019219 ORTHO05D010142 5.2e-14 82.0 154 37.7
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 1.5e-13 80.5 90 52.2
Oeu008026.2 Olea europaea HOM05D008538 ORTHO05D010142 3.4e-13 79.3 148 42.6
CsaV3_3G006000 Cucumis sativus L. HOM05D008538 ORTHO05D010142 4.4e-13 79.0 156 37.2
Lsat_1_v5_gn_3_61981 Lactuca sativa HOM05D008538 ORTHO05D010142 9.8e-13 77.8 85 50.6
Cpa.g.sc80.108 Carica papaya HOM05D008538 ORTHO05D010142 3.7e-12 75.9 115 42.6
Migut.M00874 Erythranthe guttata HOM05D008538 ORTHO05D010142 1.1e-11 74.3 116 45.7
SGA_v2.0_scaffold73G24313 Striga asiatica HOM05D008538 ORTHO05D010142 4.1e-11 72.4 109 43.1
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 7.0e-11 71.6 95 45.3
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.7e-10 69.7 98 44.9
Sed0026392 Sechium edule HOM05D008538 ORTHO05D010142 3.0e-09 66.2 147 32.0
EL10Ac4g08077 Beta vulgaris HOM05D024071 ORTHO05D023383 3.9e-09 65.9 155 37.4
Lalb_Chr19g0134471 Lupinus albus HOM05D011644 ORTHO05D010142 3.9e-09 65.9 131 37.4
TPR.G33280 Trifolium pratense HOM05D011644 ORTHO05D010142 5.0e-09 65.5 133 36.8
Glyma.06G253800 Glycine max HOM05D011644 ORTHO05D010142 1.1e-08 64.3 131 35.9
Duzib268G1845 Durio zibethinus HOM05D019219 ORTHO05D010142 2.5e-08 63.2 133 39.8
Eucgr.D01016 Eucalyptus grandis HOM05D008538 ORTHO05D010142 4.3e-08 62.4 150 34.7
QL08p018608 Quercus lobata HOM05D008538 ORTHO05D010142 5.6e-08 62.0 77 42.9
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 7.3e-08 61.6 141 34.8
Nitab4.5_0003395g0040 Nicotiana tabacum HOM05D008538 ORTHO05D010142 2.8e-07 59.7 85 42.4
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 8.0e-07 58.2 144 31.9
Phvul.011G154700 Phaseolus vulgaris HOM05D011644 ORTHO05D010142 1.1e-06 57.8 125 36.8
Hund28861 Selenicereus undatus HOM05D024071 ORTHO05D023383 1.4e-06 57.4 129 37.2
Hund28864 Selenicereus undatus HOM05D024071 ORTHO05D023383 1.4e-06 57.4 129 37.2
Gohir.A11G283900 Gossypium hirsutum HOM05D019219 ORTHO05D010142 1.8e-06 57.0 134 35.1
COL.COLO4_09473 Corchorus olitorius HOM05D019219 ORTHO05D010142 2.3e-06 56.6 147 36.1
DCAR_013075 Daucus carota HOM05D046969 ORTHO05D010142 2.3e-06 56.6 99 40.4
Ciclev10010289m.g Citrus clementina HOM05D019219 ORTHO05D010142 3.1e-06 56.2 88 42.0
Glyma.12G147600 Glycine max HOM05D011644 ORTHO05D010142 3.1e-06 56.2 131 33.6
HanXRQChr03g0075931 Helianthus annuus HOM05D008666 ORTHO05D009871 4.0e-06 55.8 145 29.0
Medtr8g469260 Medicago truncatula HOM05D011644 ORTHO05D010142 8.9e-06 54.7 127 36.2


User provided reference genes

Program Settings