Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.4e-142 509.6 252 100.0
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 1.4e-110 403.3 257 79.4
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 7.1e-107 391.0 253 75.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 1.1e-94 350.5 256 71.5
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.5e-93 346.7 254 71.7
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 5.8e-93 344.7 217 78.8
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 1.3e-92 343.6 256 70.3
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 1.7e-92 343.2 256 70.3
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.9e-92 342.4 231 74.0
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 1.2e-90 337.0 261 64.8
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.3e-84 317.0 266 63.9
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 2.9e-84 315.8 253 64.4
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.1e-83 313.9 264 62.9
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 4.2e-83 312.0 258 64.7
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 5.5e-83 311.6 257 63.8
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 5.5e-83 311.6 259 64.5
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.0e-81 307.4 264 63.6
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 1.8e-81 306.6 257 61.5
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.9e-80 303.1 261 60.9
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 5.7e-80 301.6 258 61.2
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 2.2e-79 299.7 259 60.6
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 3.7e-79 298.9 242 66.5
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.4e-78 297.0 256 61.3
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 1.4e-78 297.0 214 70.1
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 5.3e-78 295.0 252 60.7
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 5.3e-78 295.0 224 68.8
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 2.6e-77 292.7 252 59.9
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 3.4e-77 292.4 211 68.7
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 2.9e-76 289.3 257 62.3
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 3.8e-76 288.9 259 59.1
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 6.5e-76 288.1 254 58.3
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 1.1e-75 287.3 252 61.9
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 4.2e-75 285.4 256 59.4
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 9.4e-75 284.3 210 67.1
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 9.4e-75 284.3 217 67.3
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 9.4e-75 284.3 259 59.8
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.6e-74 283.5 262 57.6
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 3.6e-74 282.3 285 54.4
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 6.1e-74 281.6 256 61.3
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 2.0e-72 276.6 265 59.2
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 3.3e-72 275.8 289 53.6
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 4.3e-72 275.4 265 56.2
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 1.7e-71 273.5 352 46.0
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.2e-71 273.1 256 59.4
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 2.8e-71 272.7 261 57.9
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.8e-71 272.7 263 58.2
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 4.8e-71 271.9 170 76.5
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.8e-70 270.0 262 56.1
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 2.4e-70 269.6 214 63.6
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 2.0e-69 266.5 265 57.4
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 2.0e-69 266.5 258 55.8
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 1.7e-68 263.5 252 56.0
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.8e-68 262.3 264 55.7
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 6.5e-68 261.5 214 65.4
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.4e-67 260.4 271 53.1
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 2.5e-67 259.6 223 59.2
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.2e-67 259.2 268 52.6
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 5.5e-67 258.5 193 66.8
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 2.7e-66 256.1 259 55.2
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 3.6e-66 255.8 252 56.0
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.8e-65 253.4 234 59.4
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 3.0e-65 252.7 198 63.6
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 3.0e-65 252.7 172 74.4
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 6.7e-65 251.5 207 63.8
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.1e-64 250.8 198 63.1
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 2.6e-64 249.6 170 71.2
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 2.6e-64 249.6 170 71.2
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 4.4e-64 248.8 198 62.6
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 5.7e-64 248.4 238 55.9
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 7.4e-64 248.1 243 53.1
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 9.7e-64 247.7 193 64.2
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.7e-63 245.7 253 56.1
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 6.3e-63 245.0 193 64.8
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 8.2e-63 244.6 237 52.7
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.1e-62 244.2 259 52.9
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 1.4e-62 243.8 182 64.3
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.4e-62 243.8 179 69.3
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 3.1e-62 242.7 186 65.1
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 5.3e-62 241.9 262 51.5
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.5e-61 240.4 148 75.0
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 7.7e-61 238.0 187 64.7
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 3.2e-59 232.6 195 60.5
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 1.2e-58 230.7 214 57.0
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.2e-58 230.7 240 54.2
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 6.7e-57 224.9 169 64.5
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 5.7e-56 221.9 125 80.8
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 4.8e-55 218.8 208 54.8
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 1.8e-54 216.9 230 50.9
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 4.5e-53 212.2 172 61.0
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 1.0e-52 211.1 209 56.0
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.7e-52 210.3 282 46.8
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 5.2e-49 198.7 145 61.4
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 2.0e-45 186.8 231 48.5
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.5e-45 186.0 208 51.0
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 3.5e-45 186.0 208 51.0
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 7.2e-43 178.3 187 48.7
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 2.7e-42 176.4 133 63.2
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 3.0e-41 172.9 230 45.2
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 1.7e-39 167.2 172 54.1
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 6.3e-39 165.2 185 50.3
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 1.4e-38 164.1 110 70.9
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 1.8e-38 163.7 140 60.0
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 4.1e-38 162.5 89 79.8
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 8.6e-36 154.8 171 45.6
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 9.5e-35 151.4 82 82.9
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 2.0e-32 143.7 169 43.2
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 5.6e-27 125.6 88 72.7
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.2e-26 124.4 220 35.9
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 2.1e-26 123.6 87 71.3
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 6.8e-25 118.6 146 42.5
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 1.7e-15 87.4 220 34.5
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.4e-09 67.8 55 69.1
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 8.9e-09 65.1 88 40.9
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 3.4e-08 63.2 100 40.0


User provided reference genes

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