Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08308 Davidia involucrata HOM05D007573 ORTHO05D009938 1.5e-83 313.9 351 100.0
Cpa.g.sc80.44 Carica papaya HOM05D007573 ORTHO05D009938 4.1e-20 103.2 53 90.6
Haze_09458 Corylus avellana HOM05D007573 ORTHO05D009938 1.6e-19 101.3 53 88.7
COL.COLO4_09423 Corchorus olitorius HOM05D007573 ORTHO05D009938 2.0e-19 100.9 71 69.0
Hma1.2p1_0540F.1_g174720 Hydrangea macrophylla HOM05D007573 ORTHO05D009938 3.5e-19 100.1 52 92.3
Hma1.2p1_0540F.1_g174725 Hydrangea macrophylla HOM05D007573 ORTHO05D009938 3.5e-19 100.1 52 92.3
CiPaw.12G120200 Carya illinoinensis HOM05D007573 ORTHO05D009938 7.8e-19 99.0 57 80.7
Thecc.07G080300 Theobroma cacao HOM05D007573 ORTHO05D009938 1.3e-18 98.2 58 77.6
Manes.03G112266 Manihot esculenta HOM05D007573 ORTHO05D009938 3.9e-18 96.7 54 83.3
Gorai.002G072400 Gossypium raimondii HOM05D007573 ORTHO05D009938 5.0e-18 96.3 58 79.3
Ciclev10010140m.g Citrus clementina HOM05D007573 ORTHO05D009938 8.6e-18 95.5 58 77.6
Dinv04316 Davidia involucrata HOM05D007573 ORTHO05D009938 8.6e-18 95.5 59 81.4
VMungo1383G0060 Vigna mungo HOM05D007573 ORTHO05D009938 1.1e-17 95.1 52 86.5
CSS0004701 Camellia sinensis var. sinensis HOM05D007573 ORTHO05D009938 1.5e-17 94.7 57 75.4
Nn8g41073 Nelumbo nucifera HOM05D007573 ORTHO05D009938 1.5e-17 94.7 52 84.6
Gohir.A01G065200 Gossypium hirsutum HOM05D007573 ORTHO05D009938 2.5e-17 94.0 53 84.9
TAR626G0043 Trochodendron aralioides HOM05D007573 ORTHO05D009938 2.5e-17 94.0 52 84.6
Phvul.011G213100 Phaseolus vulgaris HOM05D007573 ORTHO05D009938 4.3e-17 93.2 52 86.5
CiPaw.08G146300 Carya illinoinensis HOM05D007573 ORTHO05D009938 5.6e-17 92.8 53 83.0
Duzib213G0732 Durio zibethinus HOM05D007573 ORTHO05D009938 5.6e-17 92.8 58 74.1
Sed0027924 Sechium edule HOM05D007573 ORTHO05D009938 5.6e-17 92.8 53 79.2
TWI39G0607 Tripterygium wilfordii HOM05D007573 ORTHO05D009938 5.6e-17 92.8 52 84.6
Glyma.12G150700 Glycine max HOM05D007573 ORTHO05D009938 1.6e-16 91.3 52 82.7
AL3G27940 Arabidopsis lyrata HOM05D007573 ORTHO05D009938 2.1e-16 90.9 57 77.2
AT3G15395 Arabidopsis thaliana HOM05D007573 ORTHO05D009938 2.1e-16 90.9 57 77.2
AL230U10020 Arabidopsis lyrata HOM05D007573 ORTHO05D013670 2.8e-16 90.5 54 79.6
Prupe.4G184300 Prunus persica HOM05D007573 ORTHO05D009938 3.6e-16 90.1 54 75.9
C05p51770 Brassica napus HOM05D007573 ORTHO05D009938 4.7e-16 89.7 56 76.8
BolC5t33863H Brassica oleracea HOM05D007573 ORTHO05D009938 4.7e-16 89.7 56 76.8
Thhalv10021902m.g Eutrema salsugineum HOM05D007573 ORTHO05D009938 4.7e-16 89.7 57 75.4
Glyma.06G246700 Glycine max HOM05D007573 ORTHO05D009938 4.7e-16 89.7 52 78.8
RcHm_v2.0_Chr5g0034341 Rosa chinensis HOM05D007573 ORTHO05D009938 4.7e-16 89.7 54 75.9
CARHR090450 Cardamine hirsuta HOM05D007573 ORTHO05D009938 6.2e-16 89.4 52 80.8
ClCG10G006860 Citrullus lanatus HOM05D007573 ORTHO05D009938 6.2e-16 89.4 54 75.9
TWI77G0001 Tripterygium wilfordii HOM05D007573 ORTHO05D009938 6.2e-16 89.4 51 80.4
BcaB06g29571 Brassica carinata HOM05D007573 ORTHO05D009938 8.0e-16 89.0 55 76.4
Atru.chr2.2713 Acer truncatum HOM05D007573 ORTHO05D009938 1.0e-15 88.6 53 77.4
CANSAT54G1030 Cannabis sativa HOM05D007573 ORTHO05D009938 1.0e-15 88.6 56 75.0
FAN04G1519 Fragaria x ananassa HOM05D007573 ORTHO05D009938 1.0e-15 88.6 54 74.1
FAN18G1355 Fragaria x ananassa HOM05D007573 ORTHO05D009938 1.0e-15 88.6 54 74.1
FAN18G3111 Fragaria x ananassa HOM05D007573 ORTHO05D009938 1.0e-15 88.6 54 74.1
MD00G1089500 Malus domestica HOM05D007573 ORTHO05D009938 1.4e-15 88.2 54 75.9
A03p39300 Brassica napus HOM05D007573 ORTHO05D009938 1.8e-15 87.8 52 78.8
C03p47670 Brassica napus HOM05D007573 ORTHO05D009938 1.8e-15 87.8 52 78.8
BraA03t13080Z Brassica rapa HOM05D003356 ORTHO05D004362 1.8e-15 87.8 52 78.8
Carub.0003s1512 Capsella rubella HOM05D007573 ORTHO05D009938 1.8e-15 87.8 57 75.4
Lj3g0024326 Lotus japonicus HOM05D007573 ORTHO05D009938 1.8e-15 87.8 59 71.2
Aa31LG8G2630 Aethionema arabicum HOM05D007573 ORTHO05D009938 2.3e-15 87.4 52 80.8
Medtr8g043400 Medicago truncatula HOM05D007573 ORTHO05D009938 3.1e-15 87.0 51 78.4
MSTRG.15220 Avicennia marina HOM05D007573 ORTHO05D009938 6.8e-15 85.9 51 78.4
Lalb_Chr03g0030571 Lupinus albus HOM05D007573 ORTHO05D009938 1.5e-14 84.7 51 76.5
Lalb_Chr19g0134301 Lupinus albus HOM05D007573 ORTHO05D009938 1.5e-14 84.7 52 76.9
PSO017G6785 Papaver somniferum HOM05D007573 ORTHO05D009938 1.5e-14 84.7 55 74.5
ATR0751G258 Amborella trichopoda HOM05D007573 ORTHO05D009938 2.0e-14 84.3 52 73.1
Cc06_g21640 Coffea canephora HOM05D007573 ORTHO05D009938 2.6e-14 84.0 46 80.4
MELO3C016521.2 Cucumis melo HOM05D007573 ORTHO05D009938 2.6e-14 84.0 52 71.2
CDE03G0215 Ceratophyllum demersum HOM05D001610 ORTHO05D001585 3.4e-14 83.6 58 63.8
Potri.001G402000 Populus trichocarpa HOM05D007573 ORTHO05D009938 4.4e-14 83.2 54 70.4
CsaV3_3G006210 Cucumis sativus L. HOM05D007573 ORTHO05D009938 5.8e-14 82.8 52 69.2
Psat4g143240 Pisum sativum HOM05D007573 ORTHO05D009938 7.5e-14 82.4 51 72.5
EL10Ac3g05359 Beta vulgaris HOM05D007573 ORTHO05D009938 1.3e-13 81.6 75 58.7
THA.LOC104810481 Tarenaya hassleriana HOM05D007573 ORTHO05D009938 1.7e-13 81.3 52 73.1
Nitab4.5_0003688g0030 Nicotiana tabacum HOM05D007573 ORTHO05D009938 2.2e-13 80.9 55 69.1
Nitab4.5_0003769g0010 Nicotiana tabacum HOM05D007573 ORTHO05D009938 2.2e-13 80.9 55 69.1
BcaC01g03875 Brassica carinata HOM05D007573 ORTHO05D009938 2.9e-13 80.5 60 68.3
Lsat_1_v5_gn_7_105220 Lactuca sativa HOM05D007573 ORTHO05D009938 4.9e-13 79.7 42 88.1
HPP92_024073 Vanilla planifolia HOM05D007573 ORTHO05D009938 8.3e-13 79.0 51 66.7
Aqoxy7G03752 Aquilegia oxysepala HOM05D007573 ORTHO05D009938 1.1e-12 78.6 49 81.6
Os02g0197400 Oryza sativa ssp. japonica HOM05D007573 ORTHO05D009938 1.1e-12 78.6 51 66.7
PGR031G1039 Punica granatum HOM05D007573 ORTHO05D009938 1.1e-12 78.6 51 70.6
Solyc07g063250.3 Solanum lycopersicum HOM05D007573 ORTHO05D009938 1.1e-12 78.6 55 67.3
Peaxi162Scf00069g01326 Petunia axillaris HOM05D007573 ORTHO05D009938 1.9e-12 77.8 46 76.1
C07p18110 Brassica napus HOM05D003404 ORTHO05D009938 4.1e-12 76.6 43 81.4
Hund27723 Selenicereus undatus HOM05D007573 ORTHO05D009938 5.4e-12 76.3 56 69.6
Hund27736 Selenicereus undatus HOM05D007573 ORTHO05D009938 5.4e-12 76.3 56 69.6
MBI15_g18737_MAGBIO Magnolia biondii HOM05D007573 ORTHO05D009938 3.5e-11 73.6 42 78.6
Actinidia09676 Actinidia chinensis HOM05D007573 ORTHO05D009938 1.1e-09 68.6 49 73.5
Migut.M00851 Erythranthe guttata HOM05D007573 ORTHO05D009938 2.5e-09 67.4 49 69.4
MD03G1224700 Malus domestica HOM05D007573 ORTHO05D009938 9.5e-09 65.5 42 73.8
Potri.006G225232 Populus trichocarpa HOM05D007573 ORTHO05D009938 1.4e-07 61.6 50 68.0
SalBow7G4816 Salvia bowleyana HOM05D007573 ORTHO05D009938 5.2e-07 59.7 95 42.1
SHI14860 Sapria himalayana HOM05D007573 ORTHO05D009938 5.2e-07 59.7 59 50.8


User provided reference genes

Program Settings