Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08282 Davidia involucrata HOM05D001394 ORTHO05D001237 4.2e-56 221.1 108 100.0
Actinidia35061 Actinidia chinensis HOM05D001394 ORTHO05D001237 7.7e-10 67.4 86 45.3
Dinv19788 Davidia involucrata HOM05D002070 ORTHO05D002489 1.0e-09 67.0 36 88.9
CARHR013900 Cardamine hirsuta HOM05D001394 ORTHO05D001237 3.8e-09 65.1 86 46.5
TAR374G1302 Trochodendron aralioides HOM05D001394 ORTHO05D001237 5.0e-09 64.7 38 76.3
Dinv36838 Davidia involucrata HOM05D001394 ORTHO05D001237 6.5e-09 64.3 88 45.5
Dinv36839 Davidia involucrata HOM05D001394 ORTHO05D001237 6.5e-09 64.3 88 45.5
CSS0041339 Camellia sinensis var. sinensis HOM05D001394 ORTHO05D001237 8.5e-09 63.9 41 68.3
AT1G13580 Arabidopsis thaliana HOM05D001394 ORTHO05D001237 1.1e-08 63.5 86 45.3
CSS0020717 Camellia sinensis var. sinensis HOM05D001394 ORTHO05D001237 1.1e-08 63.5 38 73.7
AL1G25320 Arabidopsis lyrata HOM05D001394 ORTHO05D001237 1.9e-08 62.8 86 44.2
Actinidia18964 Actinidia chinensis HOM05D001394 ORTHO05D001237 2.5e-08 62.4 88 43.2
BcaC06g31655 Brassica carinata HOM05D001394 ORTHO05D001237 2.5e-08 62.4 86 43.0
FAN17G1986 Fragaria x ananassa HOM05D001394 ORTHO05D001237 3.2e-08 62.0 46 65.2
HanXRQChr17g0550791 Helianthus annuus HOM05D001394 ORTHO05D001237 3.2e-08 62.0 94 37.2
PSO063G5292 Papaver somniferum HOM05D001394 ORTHO05D001237 4.2e-08 61.6 86 43.0
Carub.0001s1326 Capsella rubella HOM05D001394 ORTHO05D001237 5.5e-08 61.2 86 44.2
CARHR013910 Cardamine hirsuta HOM05D001394 ORTHO05D001237 5.5e-08 61.2 86 44.2
AUR62007824 Chenopodium quinoa HOM05D001394 ORTHO05D001237 5.5e-08 61.2 38 71.1
Thhalv10008348m.g Eutrema salsugineum HOM05D001394 ORTHO05D001237 5.5e-08 61.2 80 45.0
Lj9A436T75 Lonicera japonica HOM05D001394 ORTHO05D001237 5.5e-08 61.2 38 71.1
FvH4_4g28710 Fragaria vesca HOM05D001394 ORTHO05D001237 7.2e-08 60.8 38 73.7
FAN12G2698 Fragaria x ananassa HOM05D001394 ORTHO05D001237 7.2e-08 60.8 38 73.7
Sp1g11960 Schrenkiella parvula HOM05D001394 ORTHO05D001237 7.2e-08 60.8 86 44.2
Duzib248G0526 Durio zibethinus HOM05D001394 ORTHO05D001237 9.4e-08 60.5 41 61.0
ECA233G1075 Erigeron canadensis HOM05D001394 ORTHO05D001237 9.4e-08 60.5 86 40.7
Lj6A771G64 Lonicera japonica HOM05D001394 ORTHO05D001237 9.4e-08 60.5 39 66.7
Aa31LG1G1340 Aethionema arabicum HOM05D001394 ORTHO05D001237 1.2e-07 60.1 86 40.7
Ah.02g127490 Amaranthus hybridus HOM05D001394 ORTHO05D001237 1.2e-07 60.1 38 63.2
BcaB07g29724 Brassica carinata HOM05D001394 ORTHO05D001237 1.2e-07 60.1 38 68.4
BcaB08g34313 Brassica carinata HOM05D001394 ORTHO05D001237 1.2e-07 60.1 86 43.0
A09p62920 Brassica napus HOM05D001394 ORTHO05D001237 1.2e-07 60.1 86 43.0
C08p46360 Brassica napus HOM05D001394 ORTHO05D001237 1.2e-07 60.1 86 43.0
BolC8t52185H Brassica oleracea HOM05D001394 ORTHO05D001237 1.2e-07 60.1 86 43.0
BraA09t41650Z Brassica rapa HOM05D001394 ORTHO05D001237 1.2e-07 60.1 86 43.0
CiPaw.05G119900 Carya illinoinensis HOM05D001394 ORTHO05D001237 1.2e-07 60.1 38 68.4
CiPaw.06G096200 Carya illinoinensis HOM05D001394 ORTHO05D001237 1.2e-07 60.1 38 68.4
Haze_11838 Corylus avellana HOM05D001394 ORTHO05D001237 1.2e-07 60.1 38 68.4
FAN22G0474 Fragaria x ananassa HOM05D001394 ORTHO05D001237 1.2e-07 60.1 38 71.1
TAR622G0648 Trochodendron aralioides HOM05D001394 ORTHO05D001237 1.2e-07 60.1 35 74.3
Aqoxy3G00604 Aquilegia oxysepala HOM05D001394 ORTHO05D001237 1.6e-07 59.7 86 40.7
BcaC07g41634 Brassica carinata HOM05D001394 ORTHO05D001237 1.6e-07 59.7 86 41.9
A02p33830 Brassica napus HOM05D001394 ORTHO05D001237 1.6e-07 59.7 86 40.7
C02p52070 Brassica napus HOM05D001394 ORTHO05D001237 1.6e-07 59.7 86 40.7
BolC2t11292H Brassica oleracea HOM05D001394 ORTHO05D001237 1.6e-07 59.7 86 40.7
BraA02t08401Z Brassica rapa HOM05D001394 ORTHO05D001237 1.6e-07 59.7 86 40.7
Ca_22512_v3 Cicer arietinum L. HOM05D001394 ORTHO05D001237 1.6e-07 59.7 78 46.2
PGR119G0419 Punica granatum HOM05D001394 ORTHO05D001237 1.6e-07 59.7 38 71.1
SGA_v2.0_scaffold14G06780 Striga asiatica HOM05D001394 ORTHO05D001237 1.6e-07 59.7 46 56.5
HanXRQChr08g0214791 Helianthus annuus HOM05D001394 ORTHO05D001237 2.1e-07 59.3 86 40.7
MD09G1247100 Malus domestica HOM05D001394 ORTHO05D001237 2.1e-07 59.3 69 49.3
PSO782G4193 Papaver somniferum HOM05D001394 ORTHO05D001237 2.1e-07 59.3 86 41.9
Thecc.03G112400 Theobroma cacao HOM05D001394 ORTHO05D001237 2.1e-07 59.3 94 39.4
vmacro10448 Vaccinium macrocarpon HOM05D001394 ORTHO05D001237 2.1e-07 59.3 38 65.8
Atru.chr11.1517 Acer truncatum HOM05D001394 ORTHO05D001237 2.7e-07 58.9 38 63.2
Aqoxy3G03798 Aquilegia oxysepala HOM05D001394 ORTHO05D001237 2.7e-07 58.9 38 65.8
AT3G25540 Arabidopsis thaliana HOM05D001394 ORTHO05D001237 2.7e-07 58.9 89 37.1
CARHR146450 Cardamine hirsuta HOM05D001394 ORTHO05D001237 2.7e-07 58.9 94 37.2
Cfa008826 Carpinus fangiana HOM05D001394 ORTHO05D001237 2.7e-07 58.9 38 65.8
Lsat_1_v5_gn_8_37620 Lactuca sativa HOM05D001394 ORTHO05D001237 2.7e-07 58.9 94 37.2
MD06G1207300 Malus domestica HOM05D001394 ORTHO05D001237 2.7e-07 58.9 96 38.5
Manes.06G077800 Manihot esculenta HOM05D001394 ORTHO05D001237 2.7e-07 58.9 46 58.7
RcHm_v2.0_Chr4g0436831 Rosa chinensis HOM05D001394 ORTHO05D001237 2.7e-07 58.9 38 68.4
Solyc05g010280.3 Solanum lycopersicum HOM05D001394 ORTHO05D001237 2.7e-07 58.9 38 68.4
Sopen05g006050 Solanum pennellii HOM05D001394 ORTHO05D001237 2.7e-07 58.9 38 68.4
arahy.Tifrunner.gnm1.ann1.IGY6G6 Arachis hypogaea HOM05D001394 ORTHO05D001237 3.6e-07 58.5 38 68.4
MSTRG.13481 Avicennia marina HOM05D001394 ORTHO05D001237 3.6e-07 58.5 46 56.5
Dinv16570 Davidia involucrata HOM05D001394 ORTHO05D001237 3.6e-07 58.5 38 68.4
Lsat_1_v5_gn_4_21140 Lactuca sativa HOM05D001394 ORTHO05D001237 3.6e-07 58.5 86 40.7
Os02g0728300 Oryza sativa ssp. japonica HOM05D001394 ORTHO05D001237 3.6e-07 58.5 86 40.7
Phvul.003G281100 Phaseolus vulgaris HOM05D001394 ORTHO05D001237 3.6e-07 58.5 38 68.4
PGSC0003DMG400025120 Solanum tuberosum HOM05D001394 ORTHO05D001237 3.6e-07 58.5 38 68.4
VMungo0251G1699 Vigna mungo HOM05D001394 ORTHO05D001237 3.6e-07 58.5 38 68.4
CiPaw.15G117800 Carya illinoinensis HOM05D001394 ORTHO05D001237 4.7e-07 58.2 86 41.9
Ciclev10032604m.g Citrus clementina HOM05D001394 ORTHO05D001237 4.7e-07 58.2 38 71.1
COL.COLO4_27748 Corchorus olitorius HOM05D001394 ORTHO05D001237 4.7e-07 58.2 86 37.2
Nn4g23605 Nelumbo nucifera HOM05D001394 ORTHO05D001237 4.7e-07 58.2 38 73.7
Aa31LG2G6800 Aethionema arabicum HOM05D001394 ORTHO05D001237 6.1e-07 57.8 38 68.4
arahy.Tifrunner.gnm1.ann1.26IG8H Arachis hypogaea HOM05D001394 ORTHO05D001237 6.1e-07 57.8 38 68.4
MSTRG.2283 Avicennia marina HOM05D001394 ORTHO05D001237 6.1e-07 57.8 86 40.7
Eucgr.G02399 Eucalyptus grandis HOM05D001394 ORTHO05D001237 6.1e-07 57.8 38 68.4
Glyma.08G269700 Glycine max HOM05D001394 ORTHO05D001237 6.1e-07 57.8 38 68.4
Glyma.16G091200 Glycine max HOM05D001394 ORTHO05D001237 6.1e-07 57.8 38 68.4
Lalb_Chr16g0391901 Lupinus albus HOM05D001394 ORTHO05D001237 6.1e-07 57.8 38 68.4
MD13G1053200 Malus domestica HOM05D001394 ORTHO05D001237 6.1e-07 57.8 86 39.5
MD14G1217800 Malus domestica HOM05D001394 ORTHO05D001237 6.1e-07 57.8 88 39.8
Thecc.02G317800 Theobroma cacao HOM05D001394 ORTHO05D001237 6.1e-07 57.8 46 56.5
vmacro01288 Vaccinium macrocarpon HOM05D001394 ORTHO05D001237 6.1e-07 57.8 38 65.8
BcaC03g17266 Brassica carinata HOM05D001394 ORTHO05D001237 8.0e-07 57.4 86 39.5
Dinv15560 Davidia involucrata HOM05D001394 ORTHO05D001237 8.0e-07 57.4 38 65.8
Thhalv10004641m.g Eutrema salsugineum HOM05D001394 ORTHO05D001237 8.0e-07 57.4 86 39.5
Gohir.A13G096600 Gossypium hirsutum HOM05D001394 ORTHO05D001237 8.0e-07 57.4 38 63.2
HanXRQChr12g0364541 Helianthus annuus HOM05D001394 ORTHO05D001237 8.0e-07 57.4 86 38.4
Lsat_1_v5_gn_3_105401 Lactuca sativa HOM05D001394 ORTHO05D001237 8.0e-07 57.4 86 40.7
Lj3A1024T76 Lonicera japonica HOM05D001394 ORTHO05D001237 8.0e-07 57.4 94 37.2
Nn3g17604 Nelumbo nucifera HOM05D001394 ORTHO05D001237 8.0e-07 57.4 86 43.0
Peaxi162Scf00188g00626 Petunia axillaris HOM05D001394 ORTHO05D001237 8.0e-07 57.4 38 68.4
Potri.010G134700 Populus trichocarpa HOM05D001394 ORTHO05D001237 8.0e-07 57.4 38 65.8
Sabra08G0086200 Salix brachista HOM05D001394 ORTHO05D001237 8.0e-07 57.4 38 65.8
Sabra10G0103500 Salix brachista HOM05D001394 ORTHO05D001237 8.0e-07 57.4 38 65.8
Sp1g22460 Schrenkiella parvula HOM05D001394 ORTHO05D001237 8.0e-07 57.4 86 38.4
Sp2g14800 Schrenkiella parvula HOM05D001394 ORTHO05D001237 8.0e-07 57.4 86 39.5
TWI73G1292 Tripterygium wilfordii HOM05D001394 ORTHO05D001237 8.0e-07 57.4 46 52.2
CANSAT64G1860 Cannabis sativa HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 68.4
CAN.G184.16 Capsicum annuum HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 65.8
Cpa.g.sc53.9 Carica papaya HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 63.2
DCAR_030064 Daucus carota HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 65.8
Migut.E00268 Erythranthe guttata HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 63.2
FvH4_5g13070 Fragaria vesca HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 65.8
FAN08G1992 Fragaria x ananassa HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 65.8
Gohir.D12G161300 Gossypium hirsutum HOM05D001394 ORTHO05D001237 1.0e-06 57.0 46 52.2
Gorai.008G174300 Gossypium raimondii HOM05D001394 ORTHO05D001237 1.0e-06 57.0 46 52.2
Potri.008G113900 Populus trichocarpa HOM05D001394 ORTHO05D001237 1.0e-06 57.0 38 63.2
AL5G13950 Arabidopsis lyrata HOM05D001394 ORTHO05D001237 1.4e-06 56.6 86 37.2
AL5G13980 Arabidopsis lyrata HOM05D001394 ORTHO05D001237 1.4e-06 56.6 86 37.2
AUR62003021 Chenopodium quinoa HOM05D001394 ORTHO05D001237 1.4e-06 56.6 38 65.8
Gohir.D13G089800 Gossypium hirsutum HOM05D001394 ORTHO05D001237 1.4e-06 56.6 38 63.2
Gorai.013G102900 Gossypium raimondii HOM05D001394 ORTHO05D001237 1.4e-06 56.6 38 63.2
Lj4g0003346 Lotus japonicus HOM05D001394 ORTHO05D001237 1.4e-06 56.6 38 65.8
Medtr8g069850 Medicago truncatula HOM05D001394 ORTHO05D001237 1.4e-06 56.6 38 68.4
Psat4g113400 Pisum sativum HOM05D001394 ORTHO05D001237 1.4e-06 56.6 86 40.7
QL03p047819 Quercus lobata HOM05D001394 ORTHO05D001237 1.4e-06 56.6 38 63.2
unitig_22.g5557 Utricularia gibba HOM05D001394 ORTHO05D001237 1.4e-06 56.6 38 60.5
Ciclev10021283m.g Citrus clementina HOM05D001394 ORTHO05D001237 1.8e-06 56.2 86 37.2
Thhalv10008634m.g Eutrema salsugineum HOM05D001394 ORTHO05D001237 1.8e-06 56.2 87 36.8
Lalb_Chr05g0229001 Lupinus albus HOM05D001394 ORTHO05D001237 1.8e-06 56.2 38 65.8
MD16G1052200 Malus domestica HOM05D001394 ORTHO05D001237 1.8e-06 56.2 38 65.8
RcHm_v2.0_Chr7g0184061 Rosa chinensis HOM05D001394 ORTHO05D001237 1.8e-06 56.2 38 65.8
Hund25135 Selenicereus undatus HOM05D001394 ORTHO05D001237 1.8e-06 56.2 38 63.2
TPR.G24822 Trifolium pratense HOM05D001394 ORTHO05D001237 1.8e-06 56.2 38 68.4
ECA234G0459 Erigeron canadensis HOM05D001394 ORTHO05D001237 2.3e-06 55.8 38 63.2
Lsat_1_v5_gn_4_21080 Lactuca sativa HOM05D001394 ORTHO05D001237 2.3e-06 55.8 89 39.3
Oeu024137.1 Olea europaea HOM05D001394 ORTHO05D001237 2.3e-06 55.8 38 60.5
Prupe.5G211700 Prunus persica HOM05D001394 ORTHO05D001237 2.3e-06 55.8 46 54.3
unitig_62.g23704 Utricularia gibba HOM05D001394 ORTHO05D001237 2.3e-06 55.8 38 65.8
AT1G26200 Arabidopsis thaliana HOM05D001394 ORTHO05D001237 3.0e-06 55.5 87 36.8
CSS0032519 Camellia sinensis var. sinensis HOM05D001394 ORTHO05D001237 3.0e-06 55.5 46 52.2
CSS0037600 Camellia sinensis var. sinensis HOM05D001394 ORTHO05D001237 3.0e-06 55.5 46 52.2
Peaxi162Scf00204g00116 Petunia axillaris HOM05D001394 ORTHO05D001237 3.0e-06 55.5 38 63.2
PGR102G1830 Punica granatum HOM05D001394 ORTHO05D001237 3.0e-06 55.5 46 52.2
Rhsim09G0117500 Rhododendron simsii HOM05D001394 ORTHO05D001237 3.0e-06 55.5 38 65.8
Rhsim12G0069900 Rhododendron simsii HOM05D001394 ORTHO05D001237 3.0e-06 55.5 38 60.5
Sed0015764 Sechium edule HOM05D001394 ORTHO05D001237 3.0e-06 55.5 86 39.5
Hund05802 Selenicereus undatus HOM05D001394 ORTHO05D001237 3.0e-06 55.5 46 52.2
TWI31G0484 Tripterygium wilfordii HOM05D001394 ORTHO05D001237 3.0e-06 55.5 86 39.5
Nitab4.5_0000027g0530 Nicotiana tabacum HOM05D001394 ORTHO05D001237 4.0e-06 55.1 38 60.5
Nitab4.5_0010998g0040 Nicotiana tabacum HOM05D001394 ORTHO05D001237 4.0e-06 55.1 38 60.5
Prupe.1G298900 Prunus persica HOM05D001394 ORTHO05D001237 4.0e-06 55.1 38 71.1
Sc04g0007150 Simmondsia chinensis HOM05D001394 ORTHO05D001237 4.0e-06 55.1 38 60.5
CSS0013751 Camellia sinensis var. sinensis HOM05D001394 ORTHO05D001237 5.2e-06 54.7 38 60.5
Carub.0001s2476 Capsella rubella HOM05D001394 ORTHO05D001237 5.2e-06 54.7 86 37.2
Cc11_g11210 Coffea canephora HOM05D001394 ORTHO05D001237 5.2e-06 54.7 86 36.0
QL10p021640 Quercus lobata HOM05D001394 ORTHO05D001237 5.2e-06 54.7 38 68.4
QL10p021665 Quercus lobata HOM05D001394 ORTHO05D001237 5.2e-06 54.7 38 60.5
Zm00001eb253380 Zea mays HOM05D001394 ORTHO05D001237 5.2e-06 54.7 38 63.2
MSTRG.7710 Avicennia marina HOM05D001394 ORTHO05D001237 6.7e-06 54.3 86 38.4
Gohir.A12G158200 Gossypium hirsutum HOM05D001394 ORTHO05D001237 6.7e-06 54.3 38 55.3
SalBow8G4569 Salvia bowleyana HOM05D001394 ORTHO05D001237 6.7e-06 54.3 38 63.2
Carub.0005s0325 Capsella rubella HOM05D001394 ORTHO05D001237 8.8e-06 53.9 86 36.0
CDE02G4740 Ceratophyllum demersum HOM05D001394 ORTHO05D001237 8.8e-06 53.9 38 60.5
CDE04G2420 Ceratophyllum demersum HOM05D001394 ORTHO05D001237 8.8e-06 53.9 38 60.5
ECA234G0677 Erigeron canadensis HOM05D001394 ORTHO05D001237 8.8e-06 53.9 38 65.8
HanXRQChr16g0528281 Helianthus annuus HOM05D001394 ORTHO05D001237 8.8e-06 53.9 86 39.5
Lalb_Chr10g0099421 Lupinus albus HOM05D001394 ORTHO05D001237 8.8e-06 53.9 35 71.4
Oeu054578.1 Olea europaea HOM05D001394 ORTHO05D001237 8.8e-06 53.9 38 57.9


User provided reference genes

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