Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 9.1e-176 620.2 318 100.0
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.7e-153 546.2 318 86.5
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.9e-150 535.4 320 84.1
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 5.7e-146 521.2 318 82.4
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.3e-142 509.2 318 80.8
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 2.9e-142 508.8 316 80.1
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 6.6e-142 507.7 317 80.4
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 8.6e-142 507.3 318 79.2
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.9e-141 506.1 318 79.9
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 5.6e-141 504.6 318 78.9
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.2e-140 503.4 314 78.0
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.8e-140 502.3 315 76.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 2.8e-140 502.3 318 77.7
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 3.6e-140 501.9 318 80.5
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 3.6e-140 501.9 318 79.6
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 3.6e-140 501.9 316 79.7
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 4.7e-140 501.5 318 77.7
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.8e-139 499.6 315 76.5
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 2.3e-139 499.2 315 76.5
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.0e-139 498.8 316 79.4
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 3.0e-139 498.8 318 79.2
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 5.2e-139 498.0 321 78.5
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 6.8e-139 497.7 316 75.9
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 8.9e-139 497.3 317 76.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.2e-138 496.9 314 77.4
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 2.0e-138 496.1 316 78.5
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 4.4e-138 495.0 318 77.0
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 5.8e-138 494.6 318 78.6
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 7.5e-138 494.2 318 78.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 8.3e-137 490.7 318 75.8
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.4e-136 490.0 317 76.3
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 5.4e-136 488.0 317 73.8
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 9.2e-136 487.3 317 76.3
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 2.0e-135 486.1 316 76.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.7e-135 485.7 318 76.4
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 4.6e-135 485.0 303 78.9
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.0e-134 483.8 324 73.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.0e-134 483.8 318 74.5
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.7e-134 483.0 325 73.5
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.0e-134 482.3 317 75.4
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 5.0e-134 481.5 315 75.2
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 8.6e-134 480.7 318 75.8
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 8.6e-134 480.7 316 75.3
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.5e-133 479.2 319 74.6
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 2.5e-133 479.2 304 78.3
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 5.6e-133 478.0 304 78.3
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.8e-132 475.7 320 77.8
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 4.0e-131 471.9 316 74.1
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 6.8e-131 471.1 316 72.8
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 6.8e-131 471.1 318 76.7
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 8.9e-131 470.7 318 74.8
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.2e-130 470.3 316 73.4
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.2e-130 470.3 316 73.4
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.6e-130 469.2 316 73.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 5.8e-130 468.0 316 73.4
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 7.5e-130 467.6 316 72.5
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 9.8e-130 467.2 316 72.8
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.3e-129 466.8 338 70.7
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 2.2e-129 466.1 316 72.5
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 2.9e-129 465.7 318 73.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 3.7e-129 465.3 361 67.3
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 2.4e-128 462.6 322 71.7
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.2e-128 462.2 306 73.9
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 5.4e-128 461.5 304 75.3
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.6e-127 459.9 314 71.7
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 7.8e-127 457.6 306 72.9
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.3e-126 456.8 317 71.0
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 3.9e-126 455.3 297 76.1
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.5e-125 452.6 307 73.0
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 3.3e-125 452.2 303 72.6
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 7.3e-125 451.1 318 69.5
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 1.6e-124 449.9 309 71.8
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 8.1e-124 447.6 318 70.4
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 9.9e-122 440.7 317 69.1
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.7e-121 439.9 312 71.2
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 5.4e-120 434.9 289 77.2
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 6.0e-119 431.4 269 80.7
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-118 430.3 318 70.4
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 4.7e-116 421.8 318 69.5
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 1.5e-114 416.8 298 71.8
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-113 413.3 306 68.6
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 7.1e-112 407.9 339 65.2
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.2e-106 390.6 270 75.2
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 1.2e-106 390.6 270 75.2
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.7e-105 386.7 248 78.2
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 1.1e-104 384.0 316 64.9
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 4.2e-104 382.1 315 64.1
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.4e-99 367.1 255 72.9
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 1.1e-96 357.5 256 73.8
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 5.1e-94 348.6 233 73.0
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.1e-92 343.2 322 52.8
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 6.9e-91 338.2 221 77.4
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.5e-90 337.0 315 50.8
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 5.1e-86 322.0 319 53.6
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 5.3e-83 312.0 315 47.3
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 9.0e-83 311.2 315 47.0
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 7.6e-82 308.1 216 71.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 8.4e-81 304.7 181 81.8
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 3.2e-80 302.8 194 75.3
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.2e-73 280.0 305 44.6
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.4e-72 277.3 233 60.9
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 3.2e-72 276.2 332 49.7
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 1.2e-66 257.7 267 49.8
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.2e-58 231.1 314 41.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 2.2e-57 226.9 146 76.0
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.8e-51 207.2 228 52.2
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 4.4e-45 186.0 127 68.5
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 7.7e-42 175.3 129 65.1
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 3.2e-40 169.9 247 41.7
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 3.5e-34 149.8 103 72.8
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 7.8e-26 122.1 70 85.7
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 7.8e-26 122.1 93 63.4
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 9.5e-24 115.2 88 65.9
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 9.8e-21 105.1 187 37.4
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.3e-09 67.4 72 50.0
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 3.3e-08 63.5 43 72.1
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 6.2e-07 59.3 44 56.8


User provided reference genes

Program Settings