Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 2.8e-214 748.4 410 100.0
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.6e-58 230.3 389 41.6
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 7.9e-47 192.2 464 34.1
Actinidia14135 Actinidia chinensis HOM05D022929 ORTHO05D003816 1.1e-45 188.3 423 36.4
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 6.0e-39 166.0 425 34.6
RhsimUnG0162700 Rhododendron simsii HOM05D022929 ORTHO05D050680 1.0e-38 165.2 403 34.7
Rhsim07G0165800 Rhododendron simsii HOM05D022929 ORTHO05D050680 8.7e-38 162.2 403 35.2
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 3.3e-29 133.7 294 36.4
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 9.7e-29 132.1 372 38.2
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 3.1e-27 127.1 365 32.1
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 6.9e-27 125.9 350 34.0
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 6.9e-27 125.9 388 31.7
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 9.0e-27 125.6 396 30.8
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.7e-26 122.5 401 30.7
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 2.2e-25 120.9 376 32.2
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 3.8e-25 120.2 348 31.3
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 3.8e-25 120.2 391 29.7
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 5.0e-25 119.8 396 30.8
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.1e-24 118.6 393 30.8
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.4e-24 118.2 420 29.0
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 1.9e-24 117.9 422 32.2
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 3.2e-24 117.1 376 32.7
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 3.2e-24 117.1 359 32.6
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 3.2e-24 117.1 386 30.6
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 9.4e-24 115.5 406 30.0
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 3.6e-23 113.6 368 29.3
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.6e-23 113.6 352 30.7
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 6.1e-23 112.8 381 35.2
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 7.9e-23 112.5 346 29.8
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 1.4e-22 111.7 344 30.8
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 1.4e-22 111.7 342 33.0
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.8e-22 111.3 237 35.4
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 3.0e-22 110.5 274 35.0
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 3.9e-22 110.2 352 30.7
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 2.0e-21 107.8 418 27.5
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 4.3e-21 106.7 367 29.7
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.7e-21 106.3 389 28.5
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 7.4e-21 105.9 400 28.8
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 7.4e-21 105.9 398 28.9
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 9.7e-21 105.5 362 28.7
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.3e-20 105.1 378 30.2
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 2.8e-20 104.0 411 28.5
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.8e-20 104.0 328 28.7
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 3.7e-20 103.6 246 30.5
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 3.7e-20 103.6 381 29.9
Actinidia10525 Actinidia chinensis HOM05D022929 ORTHO05D003816 8.2e-20 102.4 200 37.0
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.4e-19 101.7 411 29.0
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 1.5e-18 98.2 352 29.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.0e-18 97.8 348 30.2
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 2.6e-18 97.4 332 28.3
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 3.4e-18 97.1 382 28.3
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 5.9e-18 96.3 350 29.1
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 7.7e-18 95.9 243 30.5
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.0e-17 95.5 308 29.2
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 1.0e-17 95.5 308 29.2
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.7e-17 94.7 301 29.2
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.1e-16 92.0 218 32.1
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 1.1e-16 92.0 268 29.1
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 1.9e-16 91.3 360 28.6
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 3.2e-16 90.5 397 26.2
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 5.5e-16 89.7 325 28.0
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 5.5e-16 89.7 376 26.9
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 9.4e-16 89.0 348 28.4
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 9.4e-16 89.0 382 27.2
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.6e-15 87.0 179 31.8
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 7.9e-15 85.9 365 25.8
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 7.9e-15 85.9 354 26.3
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 1.0e-14 85.5 359 27.6
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.4e-14 85.1 223 31.8
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 1.4e-14 85.1 171 33.3
QL02p018769 Quercus lobata HOM05D003426 ORTHO05D003816 1.4e-14 85.1 256 27.0
Rhsim02G0230700 Rhododendron simsii HOM05D000448 ORTHO05D000291 2.3e-14 84.3 77 54.5
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 8.8e-14 82.4 364 26.6
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 8.8e-14 82.4 364 26.6
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 8.8e-14 82.4 220 28.6
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 2.0e-13 81.3 406 27.1
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 2.0e-13 81.3 178 28.7
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 2.6e-13 80.9 345 27.2
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 4.4e-13 80.1 186 30.6
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 5.7e-13 79.7 211 29.9
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 5.7e-13 79.7 211 27.0
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 7.4e-13 79.3 322 27.3
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 7.4e-13 79.3 196 31.1
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 9.7e-13 79.0 179 29.6
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.3e-12 78.6 406 25.9
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 1.7e-12 78.2 321 32.1
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 3.7e-12 77.0 213 27.7
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 3.7e-12 77.0 461 25.2
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 6.3e-12 76.3 326 25.5
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 6.3e-12 76.3 205 28.3
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 8.2e-12 75.9 289 28.7
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 8.2e-12 75.9 235 26.0
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 8.2e-12 75.9 358 25.4
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.4e-11 75.1 382 25.9
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.8e-11 74.7 182 30.2
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.4e-11 74.3 188 30.3
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 2.4e-11 74.3 181 30.4
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 3.1e-11 73.9 213 29.6
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 4.1e-11 73.6 366 27.0
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 4.1e-11 73.6 186 30.1
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 4.1e-11 73.6 323 28.5
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 4.1e-11 73.6 170 28.8
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 4.1e-11 73.6 210 35.2
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 7.0e-11 72.8 242 30.2
CSS0023548 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D007302 1.6e-10 71.6 173 28.3
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.6e-10 71.6 358 25.4
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.6e-10 71.6 172 32.0
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 2.0e-10 71.2 329 26.4
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 5.9e-10 69.7 179 24.6
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 5.9e-10 69.7 270 27.0
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 5.9e-10 69.7 151 33.1
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 7.7e-10 69.3 441 25.2
FAN15G2135 Fragaria x ananassa HOM05D000650 ORTHO05D007302 1.3e-09 68.6 185 27.6
FvH4_2g11450 Fragaria vesca HOM05D000650 ORTHO05D007302 1.7e-09 68.2 161 30.4
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 1.7e-09 68.2 330 27.3
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 2.9e-09 67.4 123 39.0
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 3.8e-09 67.0 344 24.7
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 5.0e-09 66.6 353 26.1
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 6.5e-09 66.2 369 26.3
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 8.5e-09 65.9 194 27.8
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 8.5e-09 65.9 229 30.1
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 8.5e-09 65.9 157 26.8
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 1.1e-08 65.5 85 42.4
Aqoxy6G00819 Aquilegia oxysepala HOM05D000650 ORTHO05D000735 1.5e-08 65.1 210 29.0
Dinv24138 Davidia involucrata HOM05D000650 ORTHO05D007302 1.5e-08 65.1 162 29.0
Nitab4.5_0004586g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 1.5e-08 65.1 155 29.7
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 1.5e-08 65.1 368 25.8
SGA_v2.0_scaffold83G26387 Striga asiatica HOM05D000650 ORTHO05D000735 1.5e-08 65.1 177 29.4
FAN24G3507 Fragaria x ananassa HOM05D000650 ORTHO05D007302 1.9e-08 64.7 161 30.4
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.9e-08 64.7 228 30.3
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 1.9e-08 64.7 309 28.2
HPP92_015870 Vanilla planifolia HOM05D004872 ORTHO05D006050 2.5e-08 64.3 318 27.7
CSS0041479 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D007302 3.2e-08 63.9 168 29.2
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 3.2e-08 63.9 155 32.9
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 4.2e-08 63.5 379 26.1
Sed0023941 Sechium edule HOM05D003426 ORTHO05D003816 5.5e-08 63.2 170 28.8
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 5.5e-08 63.2 210 29.0
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 7.2e-08 62.8 167 28.1
Nitab4.5_0001259g0050 Nicotiana tabacum HOM05D000650 ORTHO05D007302 7.2e-08 62.8 197 28.4
Nitab4.5_0011705g0030 Nicotiana tabacum HOM05D003426 ORTHO05D003816 7.2e-08 62.8 79 43.0
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 9.4e-08 62.4 161 25.5
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 9.4e-08 62.4 154 32.5
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.6e-07 61.6 266 28.2
Peaxi162Scf00003g03237 Petunia axillaris HOM05D021013 ORTHO05D007302 1.6e-07 61.6 155 28.4
QL11p025817 Quercus lobata HOM05D000650 ORTHO05D007302 3.6e-07 60.5 151 28.5
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 3.6e-07 60.5 154 27.3
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 4.7e-07 60.1 73 47.9
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 4.7e-07 60.1 284 27.5
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 6.1e-07 59.7 101 34.7
FAN20G2154 Fragaria x ananassa HOM05D003426 ORTHO05D007302 8.0e-07 59.3 158 29.1
Nitab4.5_0001671g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 8.0e-07 59.3 178 28.1
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 8.0e-07 59.3 154 28.6
PGSC0003DMG402030146 Solanum tuberosum HOM05D021013 ORTHO05D007302 1.0e-06 58.9 174 29.3
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.4e-06 58.5 98 41.8
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 1.4e-06 58.5 318 23.6
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.4e-06 58.5 148 29.7
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 1.8e-06 58.2 79 43.0
Nn5g29828 Nelumbo nucifera HOM05D000650 ORTHO05D010020 1.8e-06 58.2 61 52.5
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 1.8e-06 58.2 226 26.1
DCAR_001849 Daucus carota HOM05D000650 ORTHO05D007302 2.3e-06 57.8 176 25.6
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 3.0e-06 57.4 84 38.1
vmacro01873 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 3.0e-06 57.4 150 26.7
Migut.B00537 Erythranthe guttata HOM05D000650 ORTHO05D000735 4.0e-06 57.0 162 27.8
Solyc10g047670.2 Solanum lycopersicum HOM05D000650 ORTHO05D007302 4.0e-06 57.0 157 27.4
CSS0029976 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D007302 5.2e-06 56.6 170 28.2
CARHR184730 Cardamine hirsuta HOM05D012895 ORTHO05D014428 5.2e-06 56.6 344 24.7
Haze_10691 Corylus avellana HOM05D000650 ORTHO05D007302 5.2e-06 56.6 162 26.5
Lj5A228T44 Lonicera japonica HOM05D003426 ORTHO05D007302 5.2e-06 56.6 148 25.7
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 5.2e-06 56.6 154 30.5
RcHm_v2.0_Chr6g0270151 Rosa chinensis HOM05D000650 ORTHO05D007302 5.2e-06 56.6 206 25.7
PGSC0003DMG400029015 Solanum tuberosum HOM05D000650 ORTHO05D007302 5.2e-06 56.6 182 25.3
Sopen10g015150 Solanum pennellii HOM05D003426 ORTHO05D003816 6.7e-06 56.2 77 40.3
Lj5A228T42 Lonicera japonica HOM05D000650 ORTHO05D007302 8.8e-06 55.8 150 24.7
Phvul.008G183100 Phaseolus vulgaris HOM05D000650 ORTHO05D010020 8.8e-06 55.8 70 50.0
RcHm_v2.0_Chr6g0270171 Rosa chinensis HOM05D000650 ORTHO05D007302 8.8e-06 55.8 80 38.8
Sopen10g018090 Solanum pennellii HOM05D000650 ORTHO05D007302 8.8e-06 55.8 157 27.4
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 8.8e-06 55.8 230 27.0


User provided reference genes

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