Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 2.0e-104 382.5 197 100.0
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.1e-94 350.1 197 91.4
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.5e-83 313.2 197 82.7
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.4e-81 306.6 195 84.1
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 2.3e-76 289.3 195 81.0
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.5e-75 285.8 202 77.7
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.2e-72 276.9 197 75.1
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 3.4e-72 275.4 177 83.6
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 4.4e-72 275.0 196 78.1
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.9e-71 271.6 199 77.4
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 4.9e-71 271.6 196 77.6
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.4e-70 270.0 196 76.0
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 1.9e-70 269.6 196 76.0
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.2e-69 266.9 196 75.5
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 1.6e-69 266.5 200 75.0
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 2.1e-69 266.2 195 75.9
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 3.5e-69 265.4 196 75.5
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 4.6e-69 265.0 197 73.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.0e-68 263.8 196 76.5
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.9e-68 261.9 199 75.9
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.5e-67 259.2 191 73.3
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 3.3e-67 258.8 196 74.0
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 3.3e-67 258.8 196 74.0
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 3.3e-67 258.8 198 73.7
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 4.3e-67 258.5 144 93.1
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 4.3e-67 258.5 196 76.5
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 9.6e-67 257.3 191 74.3
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 1.3e-66 256.9 193 72.5
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 1.3e-66 256.9 198 73.2
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 4.8e-66 255.0 197 72.1
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 6.2e-66 254.6 198 73.7
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 6.2e-66 254.6 197 71.6
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 6.2e-66 254.6 198 72.2
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 8.1e-66 254.2 196 73.5
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 8.1e-66 254.2 199 74.4
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.1e-65 253.8 195 74.9
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.4e-65 252.7 197 72.1
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 2.4e-65 252.7 198 72.2
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 3.1e-65 252.3 180 77.2
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 4.0e-65 251.9 196 73.0
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 4.0e-65 251.9 198 71.7
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 5.3e-65 251.5 198 72.7
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 9.0e-65 250.8 191 74.3
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.2e-64 250.4 191 74.3
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.2e-64 250.4 196 73.0
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 1.2e-64 250.4 192 72.9
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.2e-64 250.4 168 78.0
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.5e-64 250.0 197 72.6
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 1.5e-64 250.0 196 71.9
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 2.0e-64 249.6 194 72.2
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.6e-64 249.2 191 73.8
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 4.4e-64 248.4 195 72.8
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 4.4e-64 248.4 193 71.0
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 9.9e-64 247.3 195 73.3
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 9.9e-64 247.3 195 73.3
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 1.3e-63 246.9 199 71.9
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.7e-63 246.5 195 71.8
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 4.9e-63 245.0 175 76.6
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 1.1e-62 243.8 186 73.7
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.1e-62 243.8 198 69.7
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.4e-62 242.7 195 70.8
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 4.2e-62 241.9 195 70.8
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 4.2e-62 241.9 154 85.7
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 5.4e-62 241.5 194 71.1
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 7.1e-62 241.1 195 70.8
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 9.3e-62 240.7 195 70.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 9.3e-62 240.7 195 69.2
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.2e-61 240.4 195 70.3
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.2e-61 240.4 195 70.3
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.6e-61 240.0 195 71.8
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 3.5e-61 238.8 197 71.1
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 4.6e-61 238.4 192 68.8
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 4.6e-61 238.4 191 71.2
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 4.6e-61 238.4 204 71.6
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 6.0e-61 238.0 165 78.8
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 7.8e-61 237.7 195 70.8
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.7e-60 236.5 198 68.2
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 3.9e-60 235.3 195 68.7
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 3.9e-60 235.3 175 75.4
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 5.1e-60 235.0 175 74.9
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.1e-59 233.8 197 68.5
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.5e-59 233.4 141 88.7
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.5e-59 232.6 201 65.7
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.5e-59 232.6 195 66.7
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 5.6e-59 231.5 195 69.7
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 5.6e-59 231.5 182 70.9
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.3e-58 230.3 196 67.9
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.1e-58 229.6 196 66.8
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 2.1e-58 229.6 201 69.2
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 4.8e-58 228.4 192 67.2
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 1.4e-57 226.9 168 75.6
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.4e-57 226.9 194 69.6
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.8e-57 226.5 196 66.3
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 3.1e-57 225.7 173 75.1
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 3.1e-57 225.7 179 71.5
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 4.0e-57 225.3 143 85.3
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 4.0e-57 225.3 153 79.1
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 4.0e-57 225.3 142 81.7
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 5.3e-57 224.9 196 66.8
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 1.5e-56 223.4 197 66.0
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 1.5e-56 223.4 201 65.2
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 2.0e-56 223.0 174 71.8
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 3.4e-56 222.2 201 63.7
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 5.8e-56 221.5 152 78.9
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 5.8e-56 221.5 152 78.9
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 7.6e-56 221.1 141 83.0
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 9.9e-56 220.7 140 83.6
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 1.3e-55 220.3 140 83.6
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.2e-55 219.5 140 84.3
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 2.9e-55 219.2 153 77.8
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 2.9e-55 219.2 152 77.6
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 6.4e-55 218.0 140 81.4
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 8.4e-55 217.6 349 42.7
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.1e-54 217.2 140 82.9
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.4e-54 216.9 178 68.5
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 1.4e-54 216.9 153 76.5
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 1.4e-54 216.9 153 76.5
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 1.9e-54 216.5 153 76.5
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 1.9e-54 216.5 153 76.5
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.4e-54 216.1 140 83.6
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 2.4e-54 216.1 140 82.1
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 4.2e-54 215.3 140 83.6
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 5.4e-54 214.9 152 75.0
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 5.4e-54 214.9 187 66.8
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 9.3e-54 214.2 175 68.6
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.2e-53 213.8 115 96.5
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.2e-53 213.8 150 78.7
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 1.2e-53 213.8 140 82.9
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.3e-52 209.5 135 81.5
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 1.5e-51 206.8 132 79.5
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 4.3e-51 205.3 163 71.2
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 1.3e-50 203.8 187 61.0
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 2.8e-50 202.6 112 94.6
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.8e-50 202.6 191 63.9
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.8e-49 199.9 140 79.3
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.8e-49 199.9 115 91.3
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.8e-49 199.9 115 91.3
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 5.3e-49 198.4 113 92.0
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.5e-48 196.8 174 64.9
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 2.6e-48 196.1 113 90.3
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.9e-46 189.9 195 60.5
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.2e-46 188.7 195 60.0
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 2.7e-45 186.0 140 69.3
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.6e-45 185.3 142 71.8
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 6.0e-45 184.9 167 63.5
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.3e-44 183.0 203 57.6
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.9e-43 179.9 112 85.7
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.1e-41 174.1 108 81.5
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-40 170.6 143 62.2
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 2.6e-40 169.5 140 67.1
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 5.8e-40 168.3 168 63.1
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 1.6e-37 160.2 119 70.6
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.1e-35 154.1 113 70.8
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 1.5e-35 153.7 111 70.3
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 3.7e-34 149.1 94 79.8
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 6.3e-34 148.3 159 59.1
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 6.7e-28 128.3 127 61.4
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 3.3e-27 125.9 109 59.6
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.8e-25 120.2 135 49.6
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 7.7e-24 114.8 91 70.3
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 3.8e-23 112.5 85 71.8
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 6.5e-23 111.7 99 65.7
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 1.4e-22 110.5 86 73.3
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 9.4e-22 107.8 86 72.1
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 9.4e-22 107.8 86 72.1
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 9.1e-17 91.3 82 59.8
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 8.0e-13 78.2 44 90.9
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 2.3e-12 76.6 49 81.6
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 5.2e-12 75.5 47 80.9
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 1.1e-09 67.8 39 84.6
Lalb_Chr12g0198741 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-07 60.8 81 46.9
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.8e-07 59.3 83 44.6
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-06 57.4 90 42.2
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-06 57.4 90 42.2
AagrBONN_evm.TU.Sc2ySwM_340.1461 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-06 57.4 90 42.2
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-06 57.4 90 42.2
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 1.5e-06 57.4 90 42.2
AagrBONN_evm.TU.Sc2ySwM_228.5940 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.2e-06 56.2 88 42.0
AagrBONN_evm.TU.Sc2ySwM_362.2265 Anthoceros agrestis HOM05D010958 ORTHO05D004381 4.2e-06 55.8 85 41.2


User provided reference genes

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